BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010078
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...    87   2e-15
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]         87   2e-15
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...    86   4e-15
ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arab...    82   3e-14
gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]              82   3e-14

>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = -1

Query: 198 DEDVLLQMKSKLYEFERKGDQWKELCVGTVKLLKHKITGKVRLVMR-SKSLNIYVNHRIS 22
           DED +L +KSK+Y F+++G+QWKE   GTVKLLKHK TGKVRLVMR SK+L I  NH IS
Sbjct: 44  DEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLIS 103

Query: 21  SGMLV 7
           SGM V
Sbjct: 104 SGMSV 108


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = -1

Query: 198 DEDVLLQMKSKLYEFERKGDQWKELCVGTVKLLKHKITGKVRLVMR-SKSLNIYVNHRIS 22
           DED +L +KSK+Y F+++G+QWKE   GTVKLLKHK TGKVRLVMR SK+L I  NH IS
Sbjct: 44  DEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLIS 103

Query: 21  SGMLV 7
           SGM V
Sbjct: 104 SGMSV 108


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/65 (66%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
 Frame = -1

Query: 198 DEDVLLQMKSKLYEFERKGDQWKELCVGTVKLLKHKITGKVRLVMR-SKSLNIYVNHRIS 22
           DED +L +K+K+Y F+++G+QWKE   GTVKLLKHK TGKVRLVMR SK+L I  NH IS
Sbjct: 44  DEDAVLDLKAKMYRFDKEGNQWKERGAGTVKLLKHKQTGKVRLVMRQSKTLKICANHLIS 103

Query: 21  SGMLV 7
           SGM V
Sbjct: 104 SGMSV 108


>ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp.
           lyrata] gi|297325086|gb|EFH55506.1| hypothetical protein
           ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = -1

Query: 198 DEDVLLQMKSKLYEFERKGDQWKELCVGTVKLLKHKITGKVRLVMR-SKSLNIYVNHRIS 22
           DED +L +KSKLY F++ G QWKE   GTVK LKH+++GK+RLVMR SK+L I  NH + 
Sbjct: 47  DEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVG 106

Query: 21  SGMLV 7
           SGM V
Sbjct: 107 SGMSV 111


>gb|AAM13098.1| Ran binding protein [Arabidopsis thaliana]
          Length = 217

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = -1

Query: 198 DEDVLLQMKSKLYEFERKGDQWKELCVGTVKLLKHKITGKVRLVMR-SKSLNIYVNHRIS 22
           DED +L +KSKLY F++ G QWKE   GTVK LKH+++GK+RLVMR SK+L I  NH + 
Sbjct: 47  DEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVG 106

Query: 21  SGMLV 7
           SGM V
Sbjct: 107 SGMSV 111