BLASTX nr result

ID: Coptis24_contig00010061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010061
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34559.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_002262601.1| PREDICTED: BTB/POZ domain-containing protein...   224   2e-56
ref|XP_002518882.1| protein binding protein, putative [Ricinus c...   196   5e-48
ref|XP_002297956.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
ref|XP_002309253.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42

>emb|CBI34559.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/196 (60%), Positives = 145/196 (73%)
 Frame = -1

Query: 890 MDKGRASKTYKLGDRSSSDVIVRLKNREGRPEWIYCHSLILKEKSKFFADQLSRLESTNC 711
           MDK  A+K+  LGDRS+SD+ VRL NREGRPEW Y HS IL  KSKFFADQLS L+ST C
Sbjct: 1   MDKAGAAKSCTLGDRSTSDITVRLTNREGRPEWFYSHSSILINKSKFFADQLSHLDSTAC 60

Query: 710 IEVQCSESXXXXXXXXXXXXXXXXXXXXXDSWDSIRTALGVLQAAVSLCCEEISQSCIRY 531
           IE+ CS+                      DS+DS++TA+G+LQ AV+L CEEI++SCI+Y
Sbjct: 61  IEIHCSD-FDYDHHVSLLRLLYLPEDSVVDSFDSVKTAIGILQVAVALHCEEITRSCIQY 119

Query: 530 LEAVPWEDKEEEEILKAVSGLGSLAMPILARIQPVNLNATKNVFISAIQVATSIGGSHPP 351
           LEA+PWEDKEEEEILKAVS LG +AMPI+AR+QPV+L+ T+NVF+SAI+ ATSI     P
Sbjct: 120 LEAIPWEDKEEEEILKAVSKLGPVAMPIVARLQPVDLSTTRNVFVSAIRFATSIAAPCLP 179

Query: 350 LCDGLKTSAQEQVKQL 303
             D LKTSAQEQV+ +
Sbjct: 180 FGDELKTSAQEQVEYM 195


>ref|XP_002262601.1| PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform 1
           [Vitis vinifera] gi|359474133|ref|XP_003631407.1|
           PREDICTED: BTB/POZ domain-containing protein At3g05675
           isoform 2 [Vitis vinifera]
          Length = 431

 Score =  224 bits (572), Expect = 2e-56
 Identities = 118/196 (60%), Positives = 145/196 (73%)
 Frame = -1

Query: 890 MDKGRASKTYKLGDRSSSDVIVRLKNREGRPEWIYCHSLILKEKSKFFADQLSRLESTNC 711
           MDK  A+K+  LGDRS+SD+ VRL NREGRPEW Y HS IL  KSKFFADQLS L+ST C
Sbjct: 1   MDKAGAAKSCTLGDRSTSDITVRLTNREGRPEWFYSHSSILINKSKFFADQLSHLDSTAC 60

Query: 710 IEVQCSESXXXXXXXXXXXXXXXXXXXXXDSWDSIRTALGVLQAAVSLCCEEISQSCIRY 531
           IE+ CS+                      DS+DS++TA+G+LQ AV+L CEEI++SCI+Y
Sbjct: 61  IEIHCSD-FDYDHHVSLLRLLYLPEDSVVDSFDSVKTAIGILQVAVALHCEEITRSCIQY 119

Query: 530 LEAVPWEDKEEEEILKAVSGLGSLAMPILARIQPVNLNATKNVFISAIQVATSIGGSHPP 351
           LEA+PWEDKEEEEILKAVS LG +AMPI+AR+QPV+L+ T+NVF+SAI+ ATSI     P
Sbjct: 120 LEAIPWEDKEEEEILKAVSKLGPVAMPIVARLQPVDLSTTRNVFVSAIRFATSIAAPCLP 179

Query: 350 LCDGLKTSAQEQVKQL 303
             D LKTSAQEQV+ +
Sbjct: 180 FGDELKTSAQEQVEYM 195


>ref|XP_002518882.1| protein binding protein, putative [Ricinus communis]
           gi|223541869|gb|EEF43415.1| protein binding protein,
           putative [Ricinus communis]
          Length = 434

 Score =  196 bits (499), Expect = 5e-48
 Identities = 103/196 (52%), Positives = 136/196 (69%)
 Frame = -1

Query: 890 MDKGRASKTYKLGDRSSSDVIVRLKNREGRPEWIYCHSLILKEKSKFFADQLSRLESTNC 711
           M+K   +K  +LGD+S+SD+ V L+N +GRPE  Y HS IL +KSKFFA   S  +S  C
Sbjct: 1   MEKTGVAKPCRLGDQSTSDITVHLRNSDGRPEIFYSHSSILVKKSKFFAHWCSNPDSGTC 60

Query: 710 IEVQCSESXXXXXXXXXXXXXXXXXXXXXDSWDSIRTALGVLQAAVSLCCEEISQSCIRY 531
            E+ CSE                      DS +S+++A+G+L+ +V+  CEEI++SCI+Y
Sbjct: 61  FEIHCSE-YNYDHHVNFLRLLYLPAHLLLDSLESVKSAVGILEVSVAFSCEEITRSCIQY 119

Query: 530 LEAVPWEDKEEEEILKAVSGLGSLAMPILARIQPVNLNATKNVFISAIQVATSIGGSHPP 351
           LEAVPWEDKEEEEILKAVS LG +AMPI++RIQPV++ ATKNVF+SAI+ ATS GG  PP
Sbjct: 120 LEAVPWEDKEEEEILKAVSQLGPIAMPIISRIQPVDIRATKNVFVSAIRFATSTGGLFPP 179

Query: 350 LCDGLKTSAQEQVKQL 303
             D L+ SAQEQV+ +
Sbjct: 180 FGDELRLSAQEQVEYM 195


>ref|XP_002297956.1| predicted protein [Populus trichocarpa] gi|222845214|gb|EEE82761.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  192 bits (487), Expect = 1e-46
 Identities = 99/196 (50%), Positives = 132/196 (67%)
 Frame = -1

Query: 890 MDKGRASKTYKLGDRSSSDVIVRLKNREGRPEWIYCHSLILKEKSKFFADQLSRLESTNC 711
           MDK    K    GD ++SDV++ L+N EGRPE  Y HSL L  KSKFFAD  S  +S  C
Sbjct: 1   MDKTGKGKPCGFGDENTSDVVLHLRNCEGRPEVFYSHSLTLVSKSKFFADWFSSPDSGKC 60

Query: 710 IEVQCSESXXXXXXXXXXXXXXXXXXXXXDSWDSIRTALGVLQAAVSLCCEEISQSCIRY 531
           +E+ C+E                      DS DS+++A+G+L+ +V+  CEE++++CI Y
Sbjct: 61  VEIHCTE-FNYDHHVNFLRLLYLPVDLQLDSLDSVKSAIGILEVSVAFSCEEVTKNCIHY 119

Query: 530 LEAVPWEDKEEEEILKAVSGLGSLAMPILARIQPVNLNATKNVFISAIQVATSIGGSHPP 351
           LEAVPWEDKEEE+I+KAV+ LG +AMPI+ARI+PV+  ATKNVF+SA++ ATS  GS PP
Sbjct: 120 LEAVPWEDKEEEQIIKAVTNLGPIAMPIIARIKPVDFTATKNVFVSAVRFATSTCGSCPP 179

Query: 350 LCDGLKTSAQEQVKQL 303
             D LK SAQEQV+ +
Sbjct: 180 FGDELKISAQEQVEYM 195


>ref|XP_002309253.1| predicted protein [Populus trichocarpa] gi|222855229|gb|EEE92776.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  177 bits (449), Expect = 3e-42
 Identities = 91/193 (47%), Positives = 124/193 (64%), Gaps = 7/193 (3%)
 Frame = -1

Query: 860 KLGDRSSSDVIVRLKNREGRPEWIYCHSLILKEKSKFFADQLSR-------LESTNCIEV 702
           ++GDRS+SDV+VRL+  EGR +W YCHS IL EKSK+F D+LS        L+S NC+EV
Sbjct: 8   RIGDRSTSDVVVRLRTHEGRDDWFYCHSFILIEKSKYFGDRLSENWPTCQILDSRNCVEV 67

Query: 701 QCSESXXXXXXXXXXXXXXXXXXXXXDSWDSIRTALGVLQAAVSLCCEEISQSCIRYLEA 522
            C ES                     D W  ++ ALG+L+ AV L C +I  +C+ YLEA
Sbjct: 68  YCEESDFDHHVNFLRLLYVVIDGSLEDIWHGVKNALGILRVAVELGCPQIVNACVNYLEA 127

Query: 521 VPWEDKEEEEILKAVSGLGSLAMPILARIQPVNLNATKNVFISAIQVATSIGGSHPPLCD 342
           +PWE+ EE+EILK + G+GS + PILAR+QPVN +A   +F+SAI+ ATS   S P   +
Sbjct: 128 MPWEEAEEDEILKIIPGMGSKSQPILARVQPVNPSAVLRIFLSAIKFATS---SPPSPMN 184

Query: 341 GLKTSAQEQVKQL 303
            LKT+AQEQ++ +
Sbjct: 185 DLKTTAQEQLEYM 197


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