BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010059
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...   164   2e-38
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...   156   5e-36
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...   149   6e-34
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...   146   6e-33

>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  164 bits (416), Expect = 2e-38
 Identities = 82/109 (75%), Positives = 92/109 (84%)
 Frame = -3

Query: 602 PAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFIT 423
           P   LI CRG+ASKLFVGGLSFYTTE+ LSE FSQ+GQV+EAKI+ DRVSDRSKGFGF+T
Sbjct: 22  PPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVT 81

Query: 422 FASEDEAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276
           FASE+EAQKA  EM+GK LNGR I+VD AKP R  +  GMPIARGPPEP
Sbjct: 82  FASEEEAQKARTEMDGKELNGRTIFVDYAKP-RADFGGGMPIARGPPEP 129


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score =  156 bits (395), Expect = 5e-36
 Identities = 77/104 (74%), Positives = 89/104 (85%)
 Frame = -3

Query: 587 ISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASED 408
           +S RG+A+KLFVGGLSFYTT++ L+E+FSQ+GQV+EA I+SDRV DRSKGFGF+TFASED
Sbjct: 24  VSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASED 83

Query: 407 EAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276
           EA  A  EMNGK LNGRVIYVD AKP RT   N +PIARGPPEP
Sbjct: 84  EAHNALSEMNGKTLNGRVIYVDYAKP-RTDSRNEVPIARGPPEP 126


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  154 bits (388), Expect = 3e-35
 Identities = 74/101 (73%), Positives = 86/101 (85%)
 Frame = -3

Query: 578 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 399
           RG+ +KLFVGGLS YTTE  LSE+FSQ+GQV+EAKI+ DR  DRSKGFGF+T+ASEDEAQ
Sbjct: 35  RGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQ 94

Query: 398 KACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276
           KA +EMNGK LNGRVIYVD AK  +T +  G+PIARGPPEP
Sbjct: 95  KALDEMNGKALNGRVIYVDYAK-LKTNFGGGIPIARGPPEP 134


>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score =  149 bits (377), Expect = 6e-34
 Identities = 74/101 (73%), Positives = 86/101 (85%)
 Frame = -3

Query: 578 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 399
           RG+A KLFVGGLSFYTTE ALSE+FS +GQVIEAKI++DRVSDRSKGFGF+TFAS+DEA+
Sbjct: 25  RGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAE 84

Query: 398 KACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276
            A E+M GK LNGRVI+VD AKP+       +PIARGPPEP
Sbjct: 85  NAIEDMKGKTLNGRVIFVDYAKPN-INTRGEIPIARGPPEP 124


>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  146 bits (368), Expect = 6e-33
 Identities = 72/108 (66%), Positives = 88/108 (81%)
 Frame = -3

Query: 602 PAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFIT 423
           P   L+S RG+A+KLFVGGLS+YTT++ LSE+FSQ+GQVIEA ++ DRVSD+SKGFGF+T
Sbjct: 23  PPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVT 82

Query: 422 FASEDEAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPE 279
           FAS DEA  A  EMNGK LNGRVI+V+ AKP+ T     +PIARGPPE
Sbjct: 83  FASLDEAHTALSEMNGKPLNGRVIFVNYAKPT-TSSRGAIPIARGPPE 129