BLASTX nr result
ID: Coptis24_contig00010059
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010059 (817 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ... 164 2e-38 ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu... 156 5e-36 ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2... 154 3e-35 ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin... 149 6e-34 ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ... 146 6e-33 >ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera] Length = 133 Score = 164 bits (416), Expect = 2e-38 Identities = 82/109 (75%), Positives = 92/109 (84%) Frame = -3 Query: 602 PAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFIT 423 P LI CRG+ASKLFVGGLSFYTTE+ LSE FSQ+GQV+EAKI+ DRVSDRSKGFGF+T Sbjct: 22 PPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVT 81 Query: 422 FASEDEAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276 FASE+EAQKA EM+GK LNGR I+VD AKP R + GMPIARGPPEP Sbjct: 82 FASEEEAQKARTEMDGKELNGRTIFVDYAKP-RADFGGGMPIARGPPEP 129 >ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis] gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis] Length = 127 Score = 156 bits (395), Expect = 5e-36 Identities = 77/104 (74%), Positives = 89/104 (85%) Frame = -3 Query: 587 ISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASED 408 +S RG+A+KLFVGGLSFYTT++ L+E+FSQ+GQV+EA I+SDRV DRSKGFGF+TFASED Sbjct: 24 VSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASED 83 Query: 407 EAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276 EA A EMNGK LNGRVIYVD AKP RT N +PIARGPPEP Sbjct: 84 EAHNALSEMNGKTLNGRVIYVDYAKP-RTDSRNEVPIARGPPEP 126 >ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa] Length = 139 Score = 154 bits (388), Expect = 3e-35 Identities = 74/101 (73%), Positives = 86/101 (85%) Frame = -3 Query: 578 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 399 RG+ +KLFVGGLS YTTE LSE+FSQ+GQV+EAKI+ DR DRSKGFGF+T+ASEDEAQ Sbjct: 35 RGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQ 94 Query: 398 KACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276 KA +EMNGK LNGRVIYVD AK +T + G+PIARGPPEP Sbjct: 95 KALDEMNGKALNGRVIYVDYAK-LKTNFGGGIPIARGPPEP 134 >ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max] gi|255631508|gb|ACU16121.1| unknown [Glycine max] Length = 130 Score = 149 bits (377), Expect = 6e-34 Identities = 74/101 (73%), Positives = 86/101 (85%) Frame = -3 Query: 578 RGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFITFASEDEAQ 399 RG+A KLFVGGLSFYTTE ALSE+FS +GQVIEAKI++DRVSDRSKGFGF+TFAS+DEA+ Sbjct: 25 RGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAE 84 Query: 398 KACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPEP 276 A E+M GK LNGRVI+VD AKP+ +PIARGPPEP Sbjct: 85 NAIEDMKGKTLNGRVIFVDYAKPN-INTRGEIPIARGPPEP 124 >ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like [Cucumis sativus] Length = 134 Score = 146 bits (368), Expect = 6e-33 Identities = 72/108 (66%), Positives = 88/108 (81%) Frame = -3 Query: 602 PAHHLISCRGVASKLFVGGLSFYTTEEALSESFSQFGQVIEAKIISDRVSDRSKGFGFIT 423 P L+S RG+A+KLFVGGLS+YTT++ LSE+FSQ+GQVIEA ++ DRVSD+SKGFGF+T Sbjct: 23 PPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVT 82 Query: 422 FASEDEAQKACEEMNGKVLNGRVIYVDTAKPSRTGYSNGMPIARGPPE 279 FAS DEA A EMNGK LNGRVI+V+ AKP+ T +PIARGPPE Sbjct: 83 FASLDEAHTALSEMNGKPLNGRVIFVNYAKPT-TSSRGAIPIARGPPE 129