BLASTX nr result

ID: Coptis24_contig00010051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010051
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [S...    73   2e-10
ref|NP_001053826.1| Os04g0610000 [Oryza sativa Japonica Group] g...    73   2e-10
emb|CAE03561.2| OSJNBa0085I10.6 [Oryza sativa Japonica Group] gi...    73   2e-10
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    73   2e-10
ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [S...    71   7e-10

>ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [Sorghum bicolor]
            gi|241939686|gb|EES12831.1| hypothetical protein
            SORBIDRAFT_06g028070 [Sorghum bicolor]
          Length = 909

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 3/178 (1%)
 Frame = -2

Query: 1408 VEFDADGQPVGDRSTDYVSFLGRITKK--YCSIVYESFKDVTDQTRDLIWKCITDEYDVP 1235
            V  ++ GQP+G  +    SFLG + +      + Y ++K V ++ +D++   +  ++D+ 
Sbjct: 639  VSLNSSGQPIGKEAATLTSFLGALARDGILAPLTYHNWKLVPEKNKDVMCHIVKLKFDIA 698

Query: 1234 ESYRKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPX 1055
               +    K +AK +R +K +L+ +H+D ++ +E+R  +   RV +E W   V   S   
Sbjct: 699  PFPKSWILKSLAKKWRTWKFQLKQQHFDTHETEEERLADRNPRVLKEHWRFLVAYWSTEK 758

Query: 1054 XXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKKDPTAN-VTRTDSYMAINTCKDG 884
                       +  +    TSG +  AR + + K+K P  +  T  D ++  +T KDG
Sbjct: 759  AQALSAQNKAIQAKVTTYQTSGTKSFARRIEEEKQKWPNKDEPTVEDLFILTHTPKDG 816


>ref|NP_001053826.1| Os04g0610000 [Oryza sativa Japonica Group]
            gi|113565397|dbj|BAF15740.1| Os04g0610000, partial [Oryza
            sativa Japonica Group]
          Length = 767

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 57/285 (20%), Positives = 125/285 (43%), Gaps = 4/285 (1%)
 Frame = -2

Query: 1408 VEFDADGQPVGDRSTDYVSFLGRITKK--YCSIVYESFKDVTDQTRDLIWKCITDEYDVP 1235
            V  +A G+PVG  +    +FLG + +      + ++ ++ V ++ +D+++  +  ++D+ 
Sbjct: 435  VLLNASGEPVGKEAGTLSTFLGALARDGILAPLTHQDWRRVPEKNKDVMYHIVKLKFDIA 494

Query: 1234 ESYRKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPX 1055
             +      K I + ++ +K  L+ KHYD ++  E+   +   RV +E W+  V       
Sbjct: 495  PAAEFWIMKCIGRKWKSWKALLKQKHYDTHETVEECLADQNPRVLKEQWQYLVAYWGTEK 554

Query: 1054 XXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKKDP-TANVTRTDSYMAINTCKDGSF 878
                       R ++ A HT+G +  AR + + K+K P     T  D ++  +T ++G  
Sbjct: 555  AKAVSSRNKACRANVTATHTAGTKSFARIIEEEKQKRPNNEEPTAADLFLLTHTHRNGKP 614

Query: 877  FAPEKMEQIKAIIEKDPSSINLDIDHDPVAQVFXXXXXXXXXXXXXXVSKSTLLYS-APA 701
               EK + I  + E+               +V                 K+ L  S   A
Sbjct: 615  MKKEKADIIARVREQSHKQAECSGSDSAAHKVGLESCSIGLRGKRGHRRKAVLQASFKEA 674

Query: 700  KEHLRQEKEKRILEQERVGALEKQVVTLEQMMMDMKDQINTRQSS 566
            +E  R+ +++    ++++ A+E+    L++ + +MK  ++  Q +
Sbjct: 675  EEAKRKAEDEAATLRKKMVAMEESQKKLQEDLANMKSTVSAMQKT 719


>emb|CAE03561.2| OSJNBa0085I10.6 [Oryza sativa Japonica Group]
            gi|90265080|emb|CAH67753.1| H0702G05.12 [Oryza sativa
            Indica Group] gi|116309963|emb|CAH66992.1|
            OSIGBa0152L12.1 [Oryza sativa Indica Group]
            gi|218195543|gb|EEC77970.1| hypothetical protein
            OsI_17339 [Oryza sativa Indica Group]
            gi|222629524|gb|EEE61656.1| hypothetical protein
            OsJ_16109 [Oryza sativa Japonica Group]
          Length = 969

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 57/285 (20%), Positives = 125/285 (43%), Gaps = 4/285 (1%)
 Frame = -2

Query: 1408 VEFDADGQPVGDRSTDYVSFLGRITKK--YCSIVYESFKDVTDQTRDLIWKCITDEYDVP 1235
            V  +A G+PVG  +    +FLG + +      + ++ ++ V ++ +D+++  +  ++D+ 
Sbjct: 637  VLLNASGEPVGKEAGTLSTFLGALARDGILAPLTHQDWRRVPEKNKDVMYHIVKLKFDIA 696

Query: 1234 ESYRKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPX 1055
             +      K I + ++ +K  L+ KHYD ++  E+   +   RV +E W+  V       
Sbjct: 697  PAAEFWIMKCIGRKWKSWKALLKQKHYDTHETVEECLADQNPRVLKEQWQYLVAYWGTEK 756

Query: 1054 XXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKKDP-TANVTRTDSYMAINTCKDGSF 878
                       R ++ A HT+G +  AR + + K+K P     T  D ++  +T ++G  
Sbjct: 757  AKAVSSRNKACRANVTATHTAGTKSFARIIEEEKQKRPNNEEPTAADLFLLTHTHRNGKP 816

Query: 877  FAPEKMEQIKAIIEKDPSSINLDIDHDPVAQVFXXXXXXXXXXXXXXVSKSTLLYS-APA 701
               EK + I  + E+               +V                 K+ L  S   A
Sbjct: 817  MKKEKADIIARVREQSHKQAECSGSDSAAHKVGLESCSIGLRGKRGHRRKAVLQASFKEA 876

Query: 700  KEHLRQEKEKRILEQERVGALEKQVVTLEQMMMDMKDQINTRQSS 566
            +E  R+ +++    ++++ A+E+    L++ + +MK  ++  Q +
Sbjct: 877  EEAKRKAEDEAATLRKKMVAMEESQKKLQEDLANMKSTVSAMQKT 921


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 6/258 (2%)
 Frame = -2

Query: 1417 KKTVEFDADGQPVGDRSTDYVSFLGRITKKYCSIVYESFKDVTDQTRDLIWKCITDEYDV 1238
            ++ VE+     PVG  S    S++G + +++  I  E++KDV+   + + WK +   +++
Sbjct: 924  RERVEYTIMRDPVGPGSVKLASYVGTLVREHVPITIETWKDVSQDMKTVPWKSMQARFEL 983

Query: 1237 PESY-RKCQFKKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESK 1061
             E + R    K++   +R YK R   K  +   N++ +    P  +   +W  FV+ ++ 
Sbjct: 984  DEEFQRVAVLKQMGSLWRSYKSR-TVKDINLAPNNQQKMNLRPMNISPIEWRKFVKIKTS 1042

Query: 1060 PXXXXXXXXXXXXRNSLKAVHTSGRRGSARTVYDMKKK--DPTANVTRTDSYMAINTCKD 887
                         R + +  HT+ R+G  R   DMK +  DP + VTR   ++   T KD
Sbjct: 1043 AAFKVVSDKYKERRRN-QIPHTTSRKGMVRLAEDMKLESGDP-SEVTRLKFWVKSRTKKD 1100

Query: 886  GSFFAPEKMEQIKAII---EKDPSSINLDIDHDPVAQVFXXXXXXXXXXXXXXVSKSTLL 716
            G+       EQI A +   +  P+S N + DH  ++Q+               +SK+ L 
Sbjct: 1101 GTPVNTNAAEQIAAELVGSDGPPTSANPEEDH--LSQLLGPDNPGRLRAMSRGMSKTKLA 1158

Query: 715  YSAPAKEHLRQEKEKRIL 662
                 ++ +   +EK++L
Sbjct: 1159 CLQVKRKCMTDMEEKQVL 1176


>ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [Sorghum bicolor]
            gi|241940255|gb|EES13400.1| hypothetical protein
            SORBIDRAFT_07g004115 [Sorghum bicolor]
          Length = 565

 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
 Frame = -2

Query: 1390 GQPVGDRSTDYVSFLGRITKKYCSIVYESFKDVTDQTRDLIWKCITDEYDVPESYRKCQF 1211
            GQP+G     + S +G + ++  S+    ++ V  + +D +W+ + + YDV E+ +    
Sbjct: 135  GQPIGQNYRQFSSAIGCLVRRTLSVGCSDWRLVDVEKKDQVWETLKEFYDVDEAAKNWFL 194

Query: 1210 KKIAKCYREYKHRLRNKHYDKYDNDEDRRRNCPERVKQEDWEVFVRNESKPXXXXXXXXX 1031
               A+ ++++K  L+ + +D+    E  +R   +RVK  DW+  +++ + P         
Sbjct: 195  ITAARKWKDFKATLKKEFFDEKITIEALQRKHGDRVKPTDWKFLIKHWTSPEFEARMEIS 254

Query: 1030 XXXRNSLKAVHTSGRRGSARTVYDMKKKDPTANVTRTDS-YMAINTCKDG--SFFAPEKM 860
               R  L+  HTSG +  A + ++M  +     V R D  Y+  +T K+G  S  A   +
Sbjct: 255  KANRTKLRIHHTSGSKSFACSRHEMAIE--LGRVPRRDEIYIRTHTRKNGVPSQQAEPII 312

Query: 859  EQIKAIIEKDPSSINLDIDHDPVAQV 782
             ++++++E  P  I   I    V  V
Sbjct: 313  NKLRSVVEAHPELIERSIQQGDVFTV 338


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