BLASTX nr result

ID: Coptis24_contig00010042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010042
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-...   466   e-129
ref|XP_002285553.1| PREDICTED: DNA-damage-repair/toleration prot...   465   e-128
ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|1...   465   e-128
gb|ABK94260.1| unknown [Populus trichocarpa]                          462   e-128
ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127

>ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-like precursor [Glycine
            max] gi|223452540|gb|ACM89597.1| leucine rich repeat
            protein [Glycine max]
          Length = 368

 Score =  466 bits (1198), Expect = e-129
 Identities = 230/345 (66%), Positives = 267/345 (77%)
 Frame = +2

Query: 137  SCTPSDRXXXXXXXXXXXEPYLGIFNTWTGTDCCNNWYGVHCDPTNQRVADINLRGESED 316
            SC PSDR           EPYLGIFN+WTG DCC+ WYGV CD   +RVADINLRGESE+
Sbjct: 24   SCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETRRVADINLRGESEE 83

Query: 317  PIFEKAHRSGYMTGVISPAICKLDRLSNVIIADWKGISGTIPACITTLKYLRNFDLVGNR 496
            PIFE+AHR+GYMTG ISPAICKL RLS++ IADWKGISG IP CITTL +LR  DL+GNR
Sbjct: 84   PIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTLPFLRIVDLIGNR 143

Query: 497  LTGSLPVDIDKLQELAVLNVADNLITGSIPSSIVRLPELKHVDLRNNRLTGNIPALCGNM 676
            L+GS+P  I +L  L VLNVADNLI+G+IP+S+  L  L H+DLRNN  +G IP   G++
Sbjct: 144  LSGSIPAGIGRLHRLTVLNVADNLISGTIPTSLANLSSLMHLDLRNNLFSGPIPRNFGSL 203

Query: 677  KMXXXXXXXXNQLSGPIPSSISKIYRLADLDLASNLISGSIPAALGKMPVLSTLYLDNNR 856
             M        N+LSG IPSS+S+IYRLADLDL+ N ISG IP +LGKM VLSTL LD N+
Sbjct: 204  SMLSRALLSGNRLSGAIPSSVSQIYRLADLDLSRNQISGPIPESLGKMAVLSTLNLDMNK 263

Query: 857  ITGTIPSTLLSGSGVSILNLSRNGLEGYIPDVFGPKSYFSELDLSYNMLRGKIPKSISAA 1036
            ++G IP +L S SG+S LNLSRN LEG IPD FG +SYF+ LDLSYN L+G IPKSIS+A
Sbjct: 264  LSGPIPVSLFS-SGISDLNLSRNALEGNIPDAFGVRSYFTALDLSYNNLKGAIPKSISSA 322

Query: 1037 QYIGHLDLRNNHLCGQIPTGSPFDHLEASSFVNNDCLCGPPLKMC 1171
             YIGHLDL +NHLCG+IP GSPFDHLEASSFV NDCLCG PLK C
Sbjct: 323  SYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVYNDCLCGKPLKPC 367


>ref|XP_002285553.1| PREDICTED: DNA-damage-repair/toleration protein DRT100 [Vitis
            vinifera]
          Length = 364

 Score =  465 bits (1196), Expect = e-128
 Identities = 229/345 (66%), Positives = 266/345 (77%)
 Frame = +2

Query: 137  SCTPSDRXXXXXXXXXXXEPYLGIFNTWTGTDCCNNWYGVHCDPTNQRVADINLRGESED 316
            SC P+DR           EPYLGIFN+W+G DCC+NWYGV CDP  +RVADINLRGESED
Sbjct: 21   SCPPTDREALLAFRSALHEPYLGIFNSWSGYDCCHNWYGVSCDPETRRVADINLRGESED 80

Query: 317  PIFEKAHRSGYMTGVISPAICKLDRLSNVIIADWKGISGTIPACITTLKYLRNFDLVGNR 496
            PIFE+A R+GYMTG ISPAICKL RLS++IIADWKGISG IP CIT+L +LR  DL+GN+
Sbjct: 81   PIFERAGRTGYMTGTISPAICKLRRLSSIIIADWKGISGEIPTCITSLPFLRILDLIGNK 140

Query: 497  LTGSLPVDIDKLQELAVLNVADNLITGSIPSSIVRLPELKHVDLRNNRLTGNIPALCGNM 676
            L+G +P  I +LQ L VLNVADNLI+ +IPSS+ R+  L H+DLRNNR++G +P   G +
Sbjct: 141  LSGPIPAGIGRLQRLTVLNVADNLISATIPSSLTRISTLTHLDLRNNRISGELPRDFGRL 200

Query: 677  KMXXXXXXXXNQLSGPIPSSISKIYRLADLDLASNLISGSIPAALGKMPVLSTLYLDNNR 856
             M        NQ SG IPSSIS IYRLADLDL+ N  SG IPA+LGKM VLSTL LD N 
Sbjct: 201  GMLSRALLSRNQFSGTIPSSISNIYRLADLDLSLNRFSGQIPASLGKMAVLSTLNLDGNL 260

Query: 857  ITGTIPSTLLSGSGVSILNLSRNGLEGYIPDVFGPKSYFSELDLSYNMLRGKIPKSISAA 1036
            I+G IP TL++ S VSILNLSRN L+G IPD FG  SYF+ LDLSYN LRG IPKS++ A
Sbjct: 261  ISGQIPITLIN-SAVSILNLSRNALDGEIPDAFGQGSYFTSLDLSYNKLRGPIPKSMAGA 319

Query: 1037 QYIGHLDLRNNHLCGQIPTGSPFDHLEASSFVNNDCLCGPPLKMC 1171
             YIGHLDL +NHLCG+IP GSPFDHLEASSFV NDCLCG PL+ C
Sbjct: 320  AYIGHLDLSHNHLCGRIPGGSPFDHLEASSFVYNDCLCGKPLRAC 364


>ref|XP_002313289.1| predicted protein [Populus trichocarpa] gi|151936646|gb|ABS18952.1|
            DRT100 [Populus deltoides] gi|222849697|gb|EEE87244.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  465 bits (1196), Expect = e-128
 Identities = 221/346 (63%), Positives = 268/346 (77%)
 Frame = +2

Query: 134  NSCTPSDRXXXXXXXXXXXEPYLGIFNTWTGTDCCNNWYGVHCDPTNQRVADINLRGESE 313
            +SCTPSD            EPYLGIFNTW+GT+CC+NWYG+ CDPT  RVADINLRGESE
Sbjct: 20   SSCTPSDLAALLAFKSSLNEPYLGIFNTWSGTNCCSNWYGISCDPTTGRVADINLRGESE 79

Query: 314  DPIFEKAHRSGYMTGVISPAICKLDRLSNVIIADWKGISGTIPACITTLKYLRNFDLVGN 493
            DPIFEKA RSGYMTG I+P++CKLDRLS +I+ADWKG+SG IP C+ +L  LR  DL+GN
Sbjct: 80   DPIFEKAGRSGYMTGSINPSLCKLDRLSTLILADWKGVSGEIPGCVASLSNLRILDLIGN 139

Query: 494  RLTGSLPVDIDKLQELAVLNVADNLITGSIPSSIVRLPELKHVDLRNNRLTGNIPALCGN 673
            +++G +P +I  LQ L VLN+ADN +TG IP+S+  L  +KH+DL +N+LTG +PA  GN
Sbjct: 140  QISGKIPANIGNLQRLTVLNLADNGLTGEIPASLTALANMKHLDLSSNKLTGQLPADFGN 199

Query: 674  MKMXXXXXXXXNQLSGPIPSSISKIYRLADLDLASNLISGSIPAALGKMPVLSTLYLDNN 853
            +KM        NQLSG IP+SIS +YRLADLDL+ N ISGS+P  LG M VLSTL LD+N
Sbjct: 200  LKMLSRALLSKNQLSGAIPNSISGMYRLADLDLSVNKISGSVPGWLGSMRVLSTLNLDSN 259

Query: 854  RITGTIPSTLLSGSGVSILNLSRNGLEGYIPDVFGPKSYFSELDLSYNMLRGKIPKSISA 1033
             I+G +P++LLS +G+ ILNLSRN +EG IPD FGPKSYF  LDLSYN L+G IP S+S+
Sbjct: 260  MISGQLPASLLSSTGLGILNLSRNAIEGNIPDAFGPKSYFMALDLSYNNLKGPIPGSLSS 319

Query: 1034 AQYIGHLDLRNNHLCGQIPTGSPFDHLEASSFVNNDCLCGPPLKMC 1171
            A Y+GHLDL +NHLCG IP G+PFDHLEASSF  NDCLCG PLK C
Sbjct: 320  AAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNPLKTC 365


>gb|ABK94260.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  462 bits (1190), Expect = e-128
 Identities = 220/346 (63%), Positives = 267/346 (77%)
 Frame = +2

Query: 134  NSCTPSDRXXXXXXXXXXXEPYLGIFNTWTGTDCCNNWYGVHCDPTNQRVADINLRGESE 313
            +SCTPSD            EPYLGIFNTW+GT+CC+NWYG+ CDPT  RVADINLRGESE
Sbjct: 20   SSCTPSDLAALLAFKSSLNEPYLGIFNTWSGTNCCSNWYGISCDPTTGRVADINLRGESE 79

Query: 314  DPIFEKAHRSGYMTGVISPAICKLDRLSNVIIADWKGISGTIPACITTLKYLRNFDLVGN 493
            DPIFEKA RSGYMTG I+P++CKLDRLS +I+ADWKG+SG IP C+ +L  LR  DL+GN
Sbjct: 80   DPIFEKAGRSGYMTGSINPSLCKLDRLSTLILADWKGVSGEIPGCVASLSNLRILDLIGN 139

Query: 494  RLTGSLPVDIDKLQELAVLNVADNLITGSIPSSIVRLPELKHVDLRNNRLTGNIPALCGN 673
            +++G +P +I  LQ L VLN+ADN +TG IP+S+  L  +KH+D  +N+LTG +PA  GN
Sbjct: 140  QISGKIPANIGNLQRLTVLNLADNGLTGEIPASLTALANMKHLDRSSNKLTGQLPADFGN 199

Query: 674  MKMXXXXXXXXNQLSGPIPSSISKIYRLADLDLASNLISGSIPAALGKMPVLSTLYLDNN 853
            +KM        NQLSG IP+SIS +YRLADLDL+ N ISGS+P  LG M VLSTL LD+N
Sbjct: 200  LKMLSRALLSKNQLSGAIPNSISGMYRLADLDLSVNKISGSVPGWLGSMRVLSTLNLDSN 259

Query: 854  RITGTIPSTLLSGSGVSILNLSRNGLEGYIPDVFGPKSYFSELDLSYNMLRGKIPKSISA 1033
             I+G +P++LLS +G+ ILNLSRN +EG IPD FGPKSYF  LDLSYN L+G IP S+S+
Sbjct: 260  MISGQLPASLLSSTGLGILNLSRNAIEGNIPDAFGPKSYFMALDLSYNNLKGPIPGSLSS 319

Query: 1034 AQYIGHLDLRNNHLCGQIPTGSPFDHLEASSFVNNDCLCGPPLKMC 1171
            A Y+GHLDL +NHLCG IP G+PFDHLEASSF  NDCLCG PLK C
Sbjct: 320  AAYVGHLDLSHNHLCGTIPVGTPFDHLEASSFSFNDCLCGNPLKTC 365


>ref|XP_002299953.1| predicted protein [Populus trichocarpa] gi|222847211|gb|EEE84758.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  460 bits (1183), Expect = e-127
 Identities = 218/346 (63%), Positives = 265/346 (76%)
 Frame = +2

Query: 134  NSCTPSDRXXXXXXXXXXXEPYLGIFNTWTGTDCCNNWYGVHCDPTNQRVADINLRGESE 313
            +SCTPSD            EPYLGIFNTW GT+CC+NWYG+ CDPT  RVADINLRGESE
Sbjct: 21   SSCTPSDLAALQAFKSTLDEPYLGIFNTWAGTNCCSNWYGISCDPTTGRVADINLRGESE 80

Query: 314  DPIFEKAHRSGYMTGVISPAICKLDRLSNVIIADWKGISGTIPACITTLKYLRNFDLVGN 493
            DPIFEKA RSGYMTG I+P+ICKLDRLS  I+ADWKG+SG IP C+ +L  LR  DL+GN
Sbjct: 81   DPIFEKAGRSGYMTGSINPSICKLDRLSTFILADWKGVSGEIPECVVSLSNLRILDLIGN 140

Query: 494  RLTGSLPVDIDKLQELAVLNVADNLITGSIPSSIVRLPELKHVDLRNNRLTGNIPALCGN 673
            +++G +P +I  LQ L VLN+ADN +TG IPSS+ +L  +KH+DL NN LTG +P+  GN
Sbjct: 141  KISGKIPANIGNLQRLTVLNLADNGLTGEIPSSLTKLENMKHLDLSNNMLTGQLPSDFGN 200

Query: 674  MKMXXXXXXXXNQLSGPIPSSISKIYRLADLDLASNLISGSIPAALGKMPVLSTLYLDNN 853
            +KM        NQLSG IPSSIS +YRLADLDL+ N ISG +P  +G MPVLSTL LD+N
Sbjct: 201  LKMLSRALLSKNQLSGAIPSSISVMYRLADLDLSVNQISGWLPDWIGSMPVLSTLNLDSN 260

Query: 854  RITGTIPSTLLSGSGVSILNLSRNGLEGYIPDVFGPKSYFSELDLSYNMLRGKIPKSISA 1033
             I+G +P +LLS +G+ +LNLS+N +EG IPD FGPK+YF  LDLSYN L+G IP S+S+
Sbjct: 261  MISGPLPQSLLSSTGLGMLNLSKNAIEGNIPDAFGPKTYFMALDLSYNNLKGPIPSSLSS 320

Query: 1034 AQYIGHLDLRNNHLCGQIPTGSPFDHLEASSFVNNDCLCGPPLKMC 1171
            A Y+GHLDL +N+LCG IP GSPFDHLEASS+  NDCLCG PL+ C
Sbjct: 321  AAYVGHLDLSHNYLCGPIPVGSPFDHLEASSYSFNDCLCGNPLRAC 366


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