BLASTX nr result

ID: Coptis24_contig00010034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010034
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC97105.1| unknown [Arabidopsis thaliana]                          60   2e-07
ref|NP_567616.1| RNA methylase HUA ENHANCER 1 [Arabidopsis thali...    60   2e-07
pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransfe...    60   2e-07
gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana]                   60   2e-07
emb|CAB45886.1| putative protein [Arabidopsis thaliana] gi|72688...    60   2e-07

>gb|AAC97105.1| unknown [Arabidopsis thaliana]
          Length = 942

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 223  VDFSGVGGSGDLEPGFASQIAIFRNNRFHPAVQFVSTAQCYEVIWEW 83
            V+FSGVGGSG++EPGFASQIAIFR           S+ Q Y+VIWEW
Sbjct: 884  VEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEW 930


>ref|NP_567616.1| RNA methylase HUA ENHANCER 1 [Arabidopsis thaliana]
            gi|334186758|ref|NP_001190782.1| RNA methylase HUA
            ENHANCER 1 [Arabidopsis thaliana]
            gi|75333381|sp|Q9C5Q8.1|HEN1_ARATH RecName: Full=Small
            RNA 2'-O-methyltransferase; AltName: Full=Protein
            CORYMBOSA 2; AltName: Full=Protein HUA ENHANCER 1;
            AltName: Full=S-adenosylmethionine-dependent RNA
            methyltransferase HEN1
            gi|13241746|gb|AAK16435.1|AF327068_1 CORYMBOSA2
            [Arabidopsis thaliana] gi|332658974|gb|AEE84374.1| RNA
            methylase HUA ENHANCER 1 [Arabidopsis thaliana]
            gi|332658975|gb|AEE84375.1| RNA methylase HUA ENHANCER 1
            [Arabidopsis thaliana]
          Length = 942

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 223  VDFSGVGGSGDLEPGFASQIAIFRNNRFHPAVQFVSTAQCYEVIWEW 83
            V+FSGVGGSG++EPGFASQIAIFR           S+ Q Y+VIWEW
Sbjct: 884  VEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEW 930


>pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransferase Hen1
            gi|260099983|pdb|3HTX|D Chain D, Crystal Structure Of
            Small Rna Methyltransferase Hen1
          Length = 950

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 223  VDFSGVGGSGDLEPGFASQIAIFRNNRFHPAVQFVSTAQCYEVIWEW 83
            V+FSGVGGSG++EPGFASQIAIFR           S+ Q Y+VIWEW
Sbjct: 892  VEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEW 938


>gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana]
          Length = 942

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 223  VDFSGVGGSGDLEPGFASQIAIFRNNRFHPAVQFVSTAQCYEVIWEW 83
            V+FSGVGGSG++EPGFASQIAIFR           S+ Q Y+VIWEW
Sbjct: 884  VEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEW 930


>emb|CAB45886.1| putative protein [Arabidopsis thaliana] gi|7268887|emb|CAB79091.1|
            putative protein [Arabidopsis thaliana]
          Length = 957

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 223  VDFSGVGGSGDLEPGFASQIAIFRNNRFHPAVQFVSTAQCYEVIWEW 83
            V+FSGVGGSG++EPGFASQIAIFR           S+ Q Y+VIWEW
Sbjct: 899  VEFSGVGGSGEVEPGFASQIAIFRREASSVENVAESSMQPYKVIWEW 945


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