BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010027
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274426.1| PREDICTED: WD repeat domain-containing prote...   246   2e-63
ref|XP_004171068.1| PREDICTED: WD repeat domain-containing prote...   241   4e-62
ref|XP_004151629.1| PREDICTED: WD repeat domain-containing prote...   241   4e-62
ref|XP_004141980.1| PREDICTED: WD repeat domain-containing prote...   241   4e-62
gb|ACR33097.1| WD-repeat protein [Carica papaya]                      239   2e-61

>ref|XP_002274426.1| PREDICTED: WD repeat domain-containing protein 83 [Vitis vinifera]
           gi|297743030|emb|CBI35897.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  246 bits (627), Expect = 2e-63
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = +3

Query: 30  LPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREVRD 209
           LPK+EANVLRGHEGAVLA RFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGREVRD
Sbjct: 6   LPKKEANVLRGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRD 65

Query: 210 VHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYDRS 389
           VHV PDNSKLCSCGGDRQ++YWDV++GRVIRKFRGHDSEVNAVKFNEY+SVVVSAGYDRS
Sbjct: 66  VHVAPDNSKLCSCGGDRQLFYWDVSTGRVIRKFRGHDSEVNAVKFNEYASVVVSAGYDRS 125

Query: 390 VR 395
           +R
Sbjct: 126 LR 127


>ref|XP_004171068.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 177

 Score =  241 bits (615), Expect = 4e-62
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = +3

Query: 21  MSELPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGRE 200
           +SELP +E+NVL+GHEG VLA RFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGRE
Sbjct: 3   VSELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62

Query: 201 VRDVHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGY 380
           VRDVHVTPDNSKLCSCGGDRQV+YWDV++GRVIRKFRGHD EVNAVKFNEY+SVVVSAGY
Sbjct: 63  VRDVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGY 122

Query: 381 DRSVR 395
           D+S+R
Sbjct: 123 DQSLR 127


>ref|XP_004151629.1| PREDICTED: WD repeat domain-containing protein 83-like, partial
           [Cucumis sativus]
          Length = 212

 Score =  241 bits (615), Expect = 4e-62
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = +3

Query: 21  MSELPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGRE 200
           +SELP +E+NVL+GHEG VLA RFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGRE
Sbjct: 3   VSELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62

Query: 201 VRDVHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGY 380
           VRDVHVTPDNSKLCSCGGDRQV+YWDV++GRVIRKFRGHD EVNAVKFNEY+SVVVSAGY
Sbjct: 63  VRDVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGY 122

Query: 381 DRSVR 395
           D+S+R
Sbjct: 123 DQSLR 127


>ref|XP_004141980.1| PREDICTED: WD repeat domain-containing protein 83-like [Cucumis
           sativus]
          Length = 299

 Score =  241 bits (615), Expect = 4e-62
 Identities = 109/125 (87%), Positives = 119/125 (95%)
 Frame = +3

Query: 21  MSELPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGRE 200
           +SELP +E+NVL+GHEG VLA RFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGRE
Sbjct: 3   VSELPTKESNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGRE 62

Query: 201 VRDVHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGY 380
           VRDVHVTPDNSKLCSCGGDRQV+YWDV++GRVIRKFRGHD EVNAVKFNEY+SVVVSAGY
Sbjct: 63  VRDVHVTPDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKFNEYASVVVSAGY 122

Query: 381 DRSVR 395
           D+S+R
Sbjct: 123 DQSLR 127



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
 Frame = +3

Query: 12  GREMSELPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGH 191
           GRE+S+   Q  N +            + D N  L+   D T+RL +   G  ++ YKGH
Sbjct: 176 GREISDNLGQTVNCIS----------MSNDANCILASCLDSTLRLLDRSSGELLQEYKGH 225

Query: 192 GREVRDVHVTPDNSKLCSCGG--DRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVV 365
             +   +     N+     GG  D  VY+WD+    V+ KFR H S V +V ++     +
Sbjct: 226 TCKSYKLDCCLTNTDAHVTGGSEDGFVYFWDLVDASVVSKFRAHSSVVTSVSYHPKDKCM 285

Query: 366 VSAGYDRSVR 395
           ++A  D ++R
Sbjct: 286 ITASVDGTIR 295


>gb|ACR33097.1| WD-repeat protein [Carica papaya]
          Length = 259

 Score =  239 bits (610), Expect = 2e-61
 Identities = 108/124 (87%), Positives = 117/124 (94%)
 Frame = +3

Query: 24  SELPKQEANVLRGHEGAVLATRFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKGHGREV 203
           SELP++EANVL+GHEGAVLA RFN DGNYCLSCGKDRTIRLWNPHRGIHIKTYK HGREV
Sbjct: 6   SELPRKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREV 65

Query: 204 RDVHVTPDNSKLCSCGGDRQVYYWDVASGRVIRKFRGHDSEVNAVKFNEYSSVVVSAGYD 383
           RDVHVT DNSK CSCGGDRQ++YWDVA+GRVIRKFRGHD EVNAVKFNEY+ VVVSAGYD
Sbjct: 66  RDVHVTSDNSKFCSCGGDRQIFYWDVATGRVIRKFRGHDGEVNAVKFNEYAGVVVSAGYD 125

Query: 384 RSVR 395
           +S+R
Sbjct: 126 QSLR 129