BLASTX nr result

ID: Coptis24_contig00010023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010023
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]                102   3e-20
ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata] gi...   102   3e-20
ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]...   102   3e-20
gb|ACH78243.1| natural resistance associated macrophage protein ...   101   5e-20
gb|ACH78242.1| natural resistance associated macrophage protein ...   101   5e-20

>gb|AAD41078.1|AF141204_1 Nramp2 [Arabidopsis thaliana]
          Length = 530

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   KLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVLVPKLSSRTIRQAVGVVGCVIMP 174
           KLEAVFAVLIATM   FAWMFGETKPSGKE++IG+L+P+LSS+TIRQAVGVVGCVIMP
Sbjct: 204 KLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGILLPRLSSKTIRQAVGVVGCVIMP 261


>ref|XP_002894035.1| NRAMP2 [Arabidopsis lyrata subsp. lyrata]
           gi|297339877|gb|EFH70294.1| NRAMP2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 532

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   KLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVLVPKLSSRTIRQAVGVVGCVIMP 174
           KLEAVFAVLIATM   FAWMFGETKPSGKE++IG+L+P+LSS+TIRQAVGVVGCVIMP
Sbjct: 206 KLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGILLPRLSSKTIRQAVGVVGCVIMP 263


>ref|NP_175157.1| metal transporter Nramp2 [Arabidopsis thaliana]
           gi|29839611|sp|Q9C6B2.1|NRAM2_ARATH RecName: Full=Metal
           transporter Nramp2; Short=AtNramp2
           gi|12325401|gb|AAG52643.1|AC079677_7 stress response
           protein Nramp2; 19015-21280 [Arabidopsis thaliana]
           gi|15294258|gb|AAK95306.1|AF410320_1 At1g47240/F8G22_4
           [Arabidopsis thaliana] gi|20857010|gb|AAM26695.1|
           At1g47240/F8G22_4 [Arabidopsis thaliana]
           gi|332194021|gb|AEE32142.1| metal transporter Nramp2
           [Arabidopsis thaliana]
          Length = 530

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   KLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVLVPKLSSRTIRQAVGVVGCVIMP 174
           KLEAVFAVLIATM   FAWMFGETKPSGKE++IG+L+P+LSS+TIRQAVGVVGCVIMP
Sbjct: 204 KLEAVFAVLIATMGLSFAWMFGETKPSGKELMIGILLPRLSSKTIRQAVGVVGCVIMP 261


>gb|ACH78243.1| natural resistance associated macrophage protein 4.4 [Brassica
           juncea]
          Length = 450

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/58 (82%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   KLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVLVPKLSSRTIRQAVGVVGCVIMP 174
           KLEAVFAVLIATMA  FAWMFG+TKPSG E+L+G LVPKLSSRTI+QAVG+VGC+IMP
Sbjct: 127 KLEAVFAVLIATMALAFAWMFGQTKPSGTELLVGALVPKLSSRTIKQAVGIVGCIIMP 184


>gb|ACH78242.1| natural resistance associated macrophage protein 4.3 [Brassica
           juncea]
          Length = 374

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/58 (82%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   KLEAVFAVLIATMAKLFAWMFGETKPSGKEVLIGVLVPKLSSRTIRQAVGVVGCVIMP 174
           KLEAVFAVLIATMA  FAWMFG+TKPSG E+L+G LVPKLSSRTI+QAVG+VGC+IMP
Sbjct: 127 KLEAVFAVLIATMALAFAWMFGQTKPSGTELLVGALVPKLSSRTIKQAVGIVGCIIMP 184


Top