BLASTX nr result
ID: Coptis24_contig00010022
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010022 (1451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254... 217 7e-54 emb|CAN77490.1| hypothetical protein VITISV_010725 [Vitis vinifera] 202 1e-49 ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263... 196 1e-47 ref|XP_002526897.1| ATP binding protein, putative [Ricinus commu... 191 3e-46 ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|2... 189 2e-45 >ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254532 [Vitis vinifera] Length = 516 Score = 217 bits (552), Expect = 7e-54 Identities = 148/356 (41%), Positives = 183/356 (51%), Gaps = 50/356 (14%) Frame = +3 Query: 231 RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTT---SSAKNSTPTDRPTL 401 R T +G P +P +SKS++ + PTSRA LPS K T RS+T S+A++STPT RP++ Sbjct: 159 RPATPTGRPTLPATSKSSRPSTPTSRATLPSTKLTAPPVRSSTPTRSTARSSTPTTRPSV 218 Query: 402 APCMSKSRSGTTNEESTTQL--TAYRVSVPHGRSSSVGKLAPKTTPHPTLPNGSSTM-RS 572 S SRS T + S+T +A R S P RSSSV K P P GSS + +S Sbjct: 219 TASKSTSRSATPSRRSSTPTPSSATRASAPPARSSSVAKSGPTAAAPPVPSRGSSPIVKS 278 Query: 573 RPQIASEMHGLSTDASSNPSTSLTKREVSASKRR-------------------------- 674 RPQ SE G S DA N TS+ +R SAS+ R Sbjct: 279 RPQKPSEKPGFSLDAPPNLKTSMPERPASASRGRAGAASGRSTSTEAGSDARLRRQSCSP 338 Query: 675 -----------------PVVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCS 803 P + RA+SN DN+SP +IGTKMVERVVNMRKLAPP+QD+ S Sbjct: 339 SRGRGSLGSSSSNGNSIPAMRRAHSNGSDNVSPVLIGTKMVERVVNMRKLAPPKQDDHRS 398 Query: 804 IHPARK-XXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKSG 980 HPA K GFGRTLSK SLDMALRHMDI R I LRP +TN+ SS Y+++SG Sbjct: 399 AHPAGKSSSAPDSSGFGRTLSKKSLDMALRHMDIRRSIQGNLRPLMTNIPASSMYSVRSG 458 Query: 981 PXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSSQE 1148 P T SE SV + SE DD RG S +S++ Sbjct: 459 PTKSSTASVSGSPLATSSITSSEPSVNENSHCFYGSEIEDDELGSDRGHSSPASRQ 514 >emb|CAN77490.1| hypothetical protein VITISV_010725 [Vitis vinifera] Length = 569 Score = 202 bits (515), Expect = 1e-49 Identities = 142/350 (40%), Positives = 180/350 (51%), Gaps = 44/350 (12%) Frame = +3 Query: 231 RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTT---SSAKNSTPTDRPTL 401 R T +G P +P +SKS++ + PTSRA LPS K T RS+T S+A++STPT RP++ Sbjct: 174 RPATPTGRPTLPATSKSSRPSTPTSRATLPSTKLTAPPVRSSTPTRSTARSSTPTTRPSV 233 Query: 402 APCMSKSRSGTTNEESTTQL--TAYRVSVPHGRSSSVGKLAPKTTPHP------------ 539 S SRS T + S+T +A R S P RSSSV K P P Sbjct: 234 TASKSTSRSATPSRRSSTPTPSSATRASAPPARSSSVAKSGPTAAAPPGRSSSVAKSGPT 293 Query: 540 ----TLPN-GSSTMRSRPQI--------ASEMHGLSTDASSNPSTSLTKREVSASKRR-- 674 T+P+ GSS + S P+ A G ST + L ++ S S+ R Sbjct: 294 ASKSTVPSRGSSPITSMPERPASASRGRAGAASGRSTSTEAGSDARLRRQSCSPSRGRGS 353 Query: 675 -----------PVVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCSIHPARK 821 P + RA+SN DN+SP +IGTKMVERVVNMRKLAPP+QD+ S HPA K Sbjct: 354 LGSSSSNGNSIPAMRRAHSNGSDNVSPVLIGTKMVERVVNMRKLAPPKQDDHRSAHPAGK 413 Query: 822 -XXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKSGPXXXXX 998 GFGRTLSK SLDMALRHMDI R I LRP +TN+ SS Y+++SGP Sbjct: 414 SSSAPDSSGFGRTLSKKSLDMALRHMDIRRSIQGNLRPLMTNIPASSMYSVRSGPTKSST 473 Query: 999 XXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSSQE 1148 T SE SV + SE DD RG S +S++ Sbjct: 474 ASVSGSPLATSSITSSEPSVNENSHCFYGSEIEDDELGSDRGHSSPASRQ 523 >ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263846 [Vitis vinifera] gi|297736627|emb|CBI25498.3| unnamed protein product [Vitis vinifera] Length = 545 Score = 196 bits (499), Expect = 1e-47 Identities = 136/355 (38%), Positives = 177/355 (49%), Gaps = 51/355 (14%) Frame = +3 Query: 231 RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTI---SKTRSTTSSAKNSTPTDRPTL 401 R T +G P + +++ ++ A PTSRA L S KPT+ S T T S+A++STPT RP++ Sbjct: 187 RPATPTGRPTLTATTRPSRPATPTSRATLTSTKPTVPARSSTPVTRSTARSSTPTSRPSI 246 Query: 402 APCMSKSRSGTTNEESTTQLTAYRVSVPHGRS-SSVGKLAPKTTPHPTLPNGSS-TMRSR 575 SR+ T +T + +S P +S SSV K P T+ +P GSS T++SR Sbjct: 247 PASKPVSRAATPTRRPSTPSSVSNLSAPPIKSTSSVTKSGPATSRNPVPSRGSSPTVKSR 306 Query: 576 PQIASEMHGLSTDASSNPSTSLTKREVSASKRRP-------------------------- 677 P EM G S DA N TS +R VSAS+ RP Sbjct: 307 PWKPLEMPGYSLDAPPNLRTSAPERPVSASRGRPSAPIARSSSVDAAPNGRPRRQSCSPA 366 Query: 678 -----------------VVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCSI 806 VSR S DN+SP +IGTKMVERV+NMRKL PP+Q+++ S Sbjct: 367 RGRPPNGIIHTSGSSVPAVSRGLSKVSDNVSPVLIGTKMVERVINMRKLVPPKQEDKHSP 426 Query: 807 H---PARKXXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKS 977 + GFGRTLSK SLDMA+RHMDI R IP LRP +TN+ SS Y+++S Sbjct: 427 RGNLSGKLASSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGNLRPLMTNIPASSMYSVRS 486 Query: 978 GPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSS 1142 GP SE SV + D E DD+ SER G PS +S Sbjct: 487 GPTRSRTVSVSDSPLATSSNASSEVSVNNNALCVDGGEIEDDIGSERGGRPSPAS 541 >ref|XP_002526897.1| ATP binding protein, putative [Ricinus communis] gi|223533796|gb|EEF35528.1| ATP binding protein, putative [Ricinus communis] Length = 568 Score = 191 bits (486), Expect = 3e-46 Identities = 139/374 (37%), Positives = 183/374 (48%), Gaps = 76/374 (20%) Frame = +3 Query: 231 RRQTLSGNPAIPLSSKSTQSAPPTSRAALPS-------NKPTISKTRSTT---------- 359 R T +G P + ++K ++S+ PTSRA LPS KPTIS T+ T Sbjct: 191 RPATPTGRPTLTSTAKPSRSSTPTSRATLPSPKSSVSATKPTISATKPTPAMKPTSSATK 250 Query: 360 ------------SSAKNSTPTDRPTLAPCMSKSRSGTTNEESTTQLTAYRVSVPHGRSS- 500 S+A++STPT RP++ P S SR+ T +T +A VS P +SS Sbjct: 251 PAVPARSSTPTRSTARSSTPTARPSIPPSKSTSRASTPTRRPSTPASAPLVSAPPIKSSP 310 Query: 501 SVGKLAPKTTPHPTLPNGSS-TMRSRPQIASEMHGLSTDASSNPSTSLTKREVSASKRRP 677 SV + A T +P G+S T++SRP SEM G S DA N TSL +R +SA++ RP Sbjct: 311 SVTRTALTTARNPVPSRGTSPTIKSRPWKPSEMPGFSLDAPPNLRTSLPERPLSATRGRP 370 Query: 678 -------------------------------------------VVSRAYSNDGDNLSPAM 728 +SR ++ DN+SP + Sbjct: 371 GAPSSRSSSVEPTPNGRPRRQSCSPARGRAPNGIMHPSGSSVPAISRLHAKANDNVSPVL 430 Query: 729 IGTKMVERVVNMRKLAPPRQDNQCSIHP--ARKXXXXXXXGFGRTLSKSSLDMALRHMDI 902 IGTKMVERV+NMRKLAPP+QD++ S H + K GFGRTLSK SLDMA+RHMDI Sbjct: 431 IGTKMVERVINMRKLAPPKQDDKLSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDI 490 Query: 903 GRRIPSTLRPSVTNVADSSTYTLKSGPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSD 1082 R IP LRP +TN+ SS Y+++SG SE SV + D Sbjct: 491 RRSIPGNLRPLMTNIPASSMYSVRSGSARSRTISVSDSPLATSSNGSSEVSVNNNGLCLD 550 Query: 1083 DSEPVDDLASERRG 1124 E DD+ SER G Sbjct: 551 AIELEDDIGSERGG 564 >ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|222864202|gb|EEF01333.1| predicted protein [Populus trichocarpa] Length = 567 Score = 189 bits (479), Expect = 2e-45 Identities = 136/375 (36%), Positives = 176/375 (46%), Gaps = 77/375 (20%) Frame = +3 Query: 231 RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTTSSAKN------------ 374 R T +G P + K ++S+ PTSRA L S+KPTIS + T S+AK+ Sbjct: 186 RPSTPTGRPTVTTGPKPSRSSTPTSRATLSSSKPTISAAKLTVSAAKSTTSTMKSTVPAR 245 Query: 375 -----------STPTDRPTLAPCMSKSRSGTTNEESTTQLTAYRVSVPHGRSSS------ 503 STPT RP++ P S SR+ T +T + +S +SSS Sbjct: 246 SSTPSRSTARSSTPTARPSIPPSKSTSRAATPTRRPSTPTRSPSLSAAPVKSSSSVTRSA 305 Query: 504 --VGKLAPKTTPHPTLPNGSS-TMRSRPQIASEMHGLSTDASSNPSTSLTKREVSASKRR 674 V K AP +P + GSS T++SRP SEM G S DA N TS +R +SA++ R Sbjct: 306 PTVTKSAPTAARNPVMARGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSAPERPLSATRGR 365 Query: 675 P-------------------------------------------VVSRAYSNDGDNLSPA 725 P SR +S DN+SP Sbjct: 366 PGAPSARSSSVEPTPNGRPRRQSCSPSRGRAPNGIMHPSGSSVPAFSRGHSKINDNVSPV 425 Query: 726 MIGTKMVERVVNMRKLAPPRQDNQCSI--HPARKXXXXXXXGFGRTLSKSSLDMALRHMD 899 +IGTKMVERV+NMRKLAPP+QD + S + K GFGRTLSK SLDMA+RHMD Sbjct: 426 IIGTKMVERVINMRKLAPPKQDGKHSPSGNLTGKSSSPDSSGFGRTLSKKSLDMAIRHMD 485 Query: 900 IGRRIPSTLRPSVTNVADSSTYTLKSGPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFS 1079 I R IP LRP +TN+ SS Y+++SGP SE S+ + Sbjct: 486 IRRTIPGNLRPLMTNIPASSMYSVRSGPARSRTVSVSDSPLATSSNASSEVSINNNGLCL 545 Query: 1080 DDSEPVDDLASERRG 1124 D E DD+ SER G Sbjct: 546 DGIELEDDIGSERGG 560