BLASTX nr result

ID: Coptis24_contig00010022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010022
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254...   217   7e-54
emb|CAN77490.1| hypothetical protein VITISV_010725 [Vitis vinifera]   202   1e-49
ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263...   196   1e-47
ref|XP_002526897.1| ATP binding protein, putative [Ricinus commu...   191   3e-46
ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-45

>ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254532 [Vitis vinifera]
          Length = 516

 Score =  217 bits (552), Expect = 7e-54
 Identities = 148/356 (41%), Positives = 183/356 (51%), Gaps = 50/356 (14%)
 Frame = +3

Query: 231  RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTT---SSAKNSTPTDRPTL 401
            R  T +G P +P +SKS++ + PTSRA LPS K T    RS+T   S+A++STPT RP++
Sbjct: 159  RPATPTGRPTLPATSKSSRPSTPTSRATLPSTKLTAPPVRSSTPTRSTARSSTPTTRPSV 218

Query: 402  APCMSKSRSGTTNEESTTQL--TAYRVSVPHGRSSSVGKLAPKTTPHPTLPNGSSTM-RS 572
                S SRS T +  S+T    +A R S P  RSSSV K  P     P    GSS + +S
Sbjct: 219  TASKSTSRSATPSRRSSTPTPSSATRASAPPARSSSVAKSGPTAAAPPVPSRGSSPIVKS 278

Query: 573  RPQIASEMHGLSTDASSNPSTSLTKREVSASKRR-------------------------- 674
            RPQ  SE  G S DA  N  TS+ +R  SAS+ R                          
Sbjct: 279  RPQKPSEKPGFSLDAPPNLKTSMPERPASASRGRAGAASGRSTSTEAGSDARLRRQSCSP 338

Query: 675  -----------------PVVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCS 803
                             P + RA+SN  DN+SP +IGTKMVERVVNMRKLAPP+QD+  S
Sbjct: 339  SRGRGSLGSSSSNGNSIPAMRRAHSNGSDNVSPVLIGTKMVERVVNMRKLAPPKQDDHRS 398

Query: 804  IHPARK-XXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKSG 980
             HPA K        GFGRTLSK SLDMALRHMDI R I   LRP +TN+  SS Y+++SG
Sbjct: 399  AHPAGKSSSAPDSSGFGRTLSKKSLDMALRHMDIRRSIQGNLRPLMTNIPASSMYSVRSG 458

Query: 981  PXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSSQE 1148
            P                  T SE SV   +     SE  DD     RG  S +S++
Sbjct: 459  PTKSSTASVSGSPLATSSITSSEPSVNENSHCFYGSEIEDDELGSDRGHSSPASRQ 514


>emb|CAN77490.1| hypothetical protein VITISV_010725 [Vitis vinifera]
          Length = 569

 Score =  202 bits (515), Expect = 1e-49
 Identities = 142/350 (40%), Positives = 180/350 (51%), Gaps = 44/350 (12%)
 Frame = +3

Query: 231  RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTT---SSAKNSTPTDRPTL 401
            R  T +G P +P +SKS++ + PTSRA LPS K T    RS+T   S+A++STPT RP++
Sbjct: 174  RPATPTGRPTLPATSKSSRPSTPTSRATLPSTKLTAPPVRSSTPTRSTARSSTPTTRPSV 233

Query: 402  APCMSKSRSGTTNEESTTQL--TAYRVSVPHGRSSSVGKLAPKTTPHP------------ 539
                S SRS T +  S+T    +A R S P  RSSSV K  P     P            
Sbjct: 234  TASKSTSRSATPSRRSSTPTPSSATRASAPPARSSSVAKSGPTAAAPPGRSSSVAKSGPT 293

Query: 540  ----TLPN-GSSTMRSRPQI--------ASEMHGLSTDASSNPSTSLTKREVSASKRR-- 674
                T+P+ GSS + S P+         A    G ST   +     L ++  S S+ R  
Sbjct: 294  ASKSTVPSRGSSPITSMPERPASASRGRAGAASGRSTSTEAGSDARLRRQSCSPSRGRGS 353

Query: 675  -----------PVVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCSIHPARK 821
                       P + RA+SN  DN+SP +IGTKMVERVVNMRKLAPP+QD+  S HPA K
Sbjct: 354  LGSSSSNGNSIPAMRRAHSNGSDNVSPVLIGTKMVERVVNMRKLAPPKQDDHRSAHPAGK 413

Query: 822  -XXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKSGPXXXXX 998
                    GFGRTLSK SLDMALRHMDI R I   LRP +TN+  SS Y+++SGP     
Sbjct: 414  SSSAPDSSGFGRTLSKKSLDMALRHMDIRRSIQGNLRPLMTNIPASSMYSVRSGPTKSST 473

Query: 999  XXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSSQE 1148
                         T SE SV   +     SE  DD     RG  S +S++
Sbjct: 474  ASVSGSPLATSSITSSEPSVNENSHCFYGSEIEDDELGSDRGHSSPASRQ 523


>ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263846 [Vitis vinifera]
            gi|297736627|emb|CBI25498.3| unnamed protein product
            [Vitis vinifera]
          Length = 545

 Score =  196 bits (499), Expect = 1e-47
 Identities = 136/355 (38%), Positives = 177/355 (49%), Gaps = 51/355 (14%)
 Frame = +3

Query: 231  RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTI---SKTRSTTSSAKNSTPTDRPTL 401
            R  T +G P +  +++ ++ A PTSRA L S KPT+   S T  T S+A++STPT RP++
Sbjct: 187  RPATPTGRPTLTATTRPSRPATPTSRATLTSTKPTVPARSSTPVTRSTARSSTPTSRPSI 246

Query: 402  APCMSKSRSGTTNEESTTQLTAYRVSVPHGRS-SSVGKLAPKTTPHPTLPNGSS-TMRSR 575
                  SR+ T     +T  +   +S P  +S SSV K  P T+ +P    GSS T++SR
Sbjct: 247  PASKPVSRAATPTRRPSTPSSVSNLSAPPIKSTSSVTKSGPATSRNPVPSRGSSPTVKSR 306

Query: 576  PQIASEMHGLSTDASSNPSTSLTKREVSASKRRP-------------------------- 677
            P    EM G S DA  N  TS  +R VSAS+ RP                          
Sbjct: 307  PWKPLEMPGYSLDAPPNLRTSAPERPVSASRGRPSAPIARSSSVDAAPNGRPRRQSCSPA 366

Query: 678  -----------------VVSRAYSNDGDNLSPAMIGTKMVERVVNMRKLAPPRQDNQCSI 806
                              VSR  S   DN+SP +IGTKMVERV+NMRKL PP+Q+++ S 
Sbjct: 367  RGRPPNGIIHTSGSSVPAVSRGLSKVSDNVSPVLIGTKMVERVINMRKLVPPKQEDKHSP 426

Query: 807  H---PARKXXXXXXXGFGRTLSKSSLDMALRHMDIGRRIPSTLRPSVTNVADSSTYTLKS 977
                  +        GFGRTLSK SLDMA+RHMDI R IP  LRP +TN+  SS Y+++S
Sbjct: 427  RGNLSGKLASSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGNLRPLMTNIPASSMYSVRS 486

Query: 978  GPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSDDSEPVDDLASERRG*PSHSS 1142
            GP                    SE SV +     D  E  DD+ SER G PS +S
Sbjct: 487  GPTRSRTVSVSDSPLATSSNASSEVSVNNNALCVDGGEIEDDIGSERGGRPSPAS 541


>ref|XP_002526897.1| ATP binding protein, putative [Ricinus communis]
            gi|223533796|gb|EEF35528.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 568

 Score =  191 bits (486), Expect = 3e-46
 Identities = 139/374 (37%), Positives = 183/374 (48%), Gaps = 76/374 (20%)
 Frame = +3

Query: 231  RRQTLSGNPAIPLSSKSTQSAPPTSRAALPS-------NKPTISKTRSTT---------- 359
            R  T +G P +  ++K ++S+ PTSRA LPS        KPTIS T+ T           
Sbjct: 191  RPATPTGRPTLTSTAKPSRSSTPTSRATLPSPKSSVSATKPTISATKPTPAMKPTSSATK 250

Query: 360  ------------SSAKNSTPTDRPTLAPCMSKSRSGTTNEESTTQLTAYRVSVPHGRSS- 500
                        S+A++STPT RP++ P  S SR+ T     +T  +A  VS P  +SS 
Sbjct: 251  PAVPARSSTPTRSTARSSTPTARPSIPPSKSTSRASTPTRRPSTPASAPLVSAPPIKSSP 310

Query: 501  SVGKLAPKTTPHPTLPNGSS-TMRSRPQIASEMHGLSTDASSNPSTSLTKREVSASKRRP 677
            SV + A  T  +P    G+S T++SRP   SEM G S DA  N  TSL +R +SA++ RP
Sbjct: 311  SVTRTALTTARNPVPSRGTSPTIKSRPWKPSEMPGFSLDAPPNLRTSLPERPLSATRGRP 370

Query: 678  -------------------------------------------VVSRAYSNDGDNLSPAM 728
                                                        +SR ++   DN+SP +
Sbjct: 371  GAPSSRSSSVEPTPNGRPRRQSCSPARGRAPNGIMHPSGSSVPAISRLHAKANDNVSPVL 430

Query: 729  IGTKMVERVVNMRKLAPPRQDNQCSIHP--ARKXXXXXXXGFGRTLSKSSLDMALRHMDI 902
            IGTKMVERV+NMRKLAPP+QD++ S H   + K       GFGRTLSK SLDMA+RHMDI
Sbjct: 431  IGTKMVERVINMRKLAPPKQDDKLSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDI 490

Query: 903  GRRIPSTLRPSVTNVADSSTYTLKSGPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFSD 1082
             R IP  LRP +TN+  SS Y+++SG                     SE SV +     D
Sbjct: 491  RRSIPGNLRPLMTNIPASSMYSVRSGSARSRTISVSDSPLATSSNGSSEVSVNNNGLCLD 550

Query: 1083 DSEPVDDLASERRG 1124
              E  DD+ SER G
Sbjct: 551  AIELEDDIGSERGG 564


>ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|222864202|gb|EEF01333.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  189 bits (479), Expect = 2e-45
 Identities = 136/375 (36%), Positives = 176/375 (46%), Gaps = 77/375 (20%)
 Frame = +3

Query: 231  RRQTLSGNPAIPLSSKSTQSAPPTSRAALPSNKPTISKTRSTTSSAKN------------ 374
            R  T +G P +    K ++S+ PTSRA L S+KPTIS  + T S+AK+            
Sbjct: 186  RPSTPTGRPTVTTGPKPSRSSTPTSRATLSSSKPTISAAKLTVSAAKSTTSTMKSTVPAR 245

Query: 375  -----------STPTDRPTLAPCMSKSRSGTTNEESTTQLTAYRVSVPHGRSSS------ 503
                       STPT RP++ P  S SR+ T     +T   +  +S    +SSS      
Sbjct: 246  SSTPSRSTARSSTPTARPSIPPSKSTSRAATPTRRPSTPTRSPSLSAAPVKSSSSVTRSA 305

Query: 504  --VGKLAPKTTPHPTLPNGSS-TMRSRPQIASEMHGLSTDASSNPSTSLTKREVSASKRR 674
              V K AP    +P +  GSS T++SRP   SEM G S DA  N  TS  +R +SA++ R
Sbjct: 306  PTVTKSAPTAARNPVMARGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSAPERPLSATRGR 365

Query: 675  P-------------------------------------------VVSRAYSNDGDNLSPA 725
            P                                             SR +S   DN+SP 
Sbjct: 366  PGAPSARSSSVEPTPNGRPRRQSCSPSRGRAPNGIMHPSGSSVPAFSRGHSKINDNVSPV 425

Query: 726  MIGTKMVERVVNMRKLAPPRQDNQCSI--HPARKXXXXXXXGFGRTLSKSSLDMALRHMD 899
            +IGTKMVERV+NMRKLAPP+QD + S   +   K       GFGRTLSK SLDMA+RHMD
Sbjct: 426  IIGTKMVERVINMRKLAPPKQDGKHSPSGNLTGKSSSPDSSGFGRTLSKKSLDMAIRHMD 485

Query: 900  IGRRIPSTLRPSVTNVADSSTYTLKSGPXXXXXXXXXXXXXXXXXXTRSEFSVISTTPFS 1079
            I R IP  LRP +TN+  SS Y+++SGP                    SE S+ +     
Sbjct: 486  IRRTIPGNLRPLMTNIPASSMYSVRSGPARSRTVSVSDSPLATSSNASSEVSINNNGLCL 545

Query: 1080 DDSEPVDDLASERRG 1124
            D  E  DD+ SER G
Sbjct: 546  DGIELEDDIGSERGG 560


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