BLASTX nr result

ID: Coptis24_contig00010021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010021
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510520.1| conserved hypothetical protein [Ricinus comm...    67   3e-09
ref|XP_002276474.1| PREDICTED: HVA22-like protein i [Vitis vinif...    60   2e-07
emb|CAN61697.1| hypothetical protein VITISV_039338 [Vitis vinifera]    60   2e-07
ref|XP_003603748.1| HVA22-like protein i [Medicago truncatula] g...    58   9e-07
ref|XP_003523535.1| PREDICTED: HVA22-like protein i-like [Glycin...    57   2e-06

>ref|XP_002510520.1| conserved hypothetical protein [Ricinus communis]
           gi|223551221|gb|EEF52707.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
 Frame = -1

Query: 560 SRTSSTGITQHQQETALDKXXXXXXXXXATVQVEA-AGASQ-----PAAQLSSQPTQTEA 399
           S TSST  +QH  + A +          A+  ++A AGAS         + SSQP+ T+A
Sbjct: 150 SPTSSTSSSQHHTDVAEEVREAPVPPAAASNALKAPAGASSVQKVDAGPETSSQPSSTKA 209

Query: 398 ELMRIEQV-SSTGGNVNPPAQDTVMEEVIRVTRSRLRRNRAAAKS 267
           E+M+IE   SST  N NPP ++T M+E IRVTR+RLR++R+  KS
Sbjct: 210 EVMQIEAAPSSTNENENPPPKETNMDEAIRVTRARLRKSRSGPKS 254


>ref|XP_002276474.1| PREDICTED: HVA22-like protein i [Vitis vinifera]
           gi|302142645|emb|CBI19848.3| unnamed protein product
           [Vitis vinifera]
          Length = 288

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -1

Query: 560 SRTSSTGITQHQQETALDKXXXXXXXXXA-----TVQVEAAGASQPAAQLSSQPTQTEAE 396
           S TSST  +Q+Q+E   ++         A     T+  +    +QPA + +SQ T   AE
Sbjct: 185 SPTSSTTSSQNQEEATQEEPPPSQEPKEAAPPAPTLNAQKTTVTQPATETTSQSTSNGAE 244

Query: 395 LMRIEQVSSTGG-NVNPPAQDTVMEEVIRVTRSRLRRNRA 279
            M+IE VSS    N NP   +TVMEE IRVTRS+ R+ R+
Sbjct: 245 DMQIEPVSSLPNENANPQPPETVMEETIRVTRSKFRKTRS 284


>emb|CAN61697.1| hypothetical protein VITISV_039338 [Vitis vinifera]
          Length = 249

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -1

Query: 560 SRTSSTGITQHQQETALDKXXXXXXXXXA-----TVQVEAAGASQPAAQLSSQPTQTEAE 396
           S TSST  +Q+Q+E   ++         A     T+  +    +QPA + +SQ T   AE
Sbjct: 146 SPTSSTTSSQNQEEATQEEPPPSQEPKEAAPPAPTLNAQKTTVTQPATETTSQSTSNGAE 205

Query: 395 LMRIEQVSSTGG-NVNPPAQDTVMEEVIRVTRSRLRRNRA 279
            M+IE VSS    N NP   +TVMEE IRVTRS+ R+ R+
Sbjct: 206 DMQIEPVSSLPNENANPQPPETVMEETIRVTRSKFRKTRS 245


>ref|XP_003603748.1| HVA22-like protein i [Medicago truncatula]
           gi|355492796|gb|AES73999.1| HVA22-like protein i
           [Medicago truncatula]
          Length = 434

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
 Frame = -1

Query: 554 TSSTGITQHQQETALDKXXXXXXXXXATVQVEAAGASQPAAQLSSQPTQTEAELMRIEQV 375
           TSS+  +QHQ+E A +          +++       + P  +  +Q    EAE M+IE  
Sbjct: 337 TSSSSSSQHQKELAEELGSSQVPKTLSSLAGLNTQKNIPTQESGNQSAPAEAEPMQIEAA 396

Query: 374 --SSTGGNVNPPAQDTVMEEVIRVTRSRLRRNRA 279
             SS+  N NPP+ +T+MEE IRVTR RLR+ R+
Sbjct: 397 LPSSSSANENPPSSETIMEESIRVTRGRLRKTRS 430


>ref|XP_003523535.1| PREDICTED: HVA22-like protein i-like [Glycine max]
          Length = 285

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
 Frame = -1

Query: 560 SRTSSTGITQHQQETALDKXXXXXXXXXATVQVEAAGASQPAAQLSSQPTQTEAELMRIE 381
           S TSS+   Q ++    +           TV   ++  S P  + ++Q    E E M+IE
Sbjct: 184 SPTSSSSSQQQKEVAEEELGSSQVPKAPYTVAGLSSQKSNPIPETANQSVPEEDEPMQIE 243

Query: 380 QV----SSTGGNVNPPAQDTVMEEVIRVTRSRLRRNRAA 276
                 SS   N NPP +DT+MEE IRVTR RLR+NR+A
Sbjct: 244 AAAPSSSSANENENPPLEDTIMEESIRVTRGRLRKNRSA 282


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