BLASTX nr result

ID: Coptis24_contig00010020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010020
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530997.1| conserved hypothetical protein [Ricinus comm...   262   9e-68
ref|XP_002305388.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_002281105.1| PREDICTED: uncharacterized protein LOC100241...   247   3e-63
emb|CAN66988.1| hypothetical protein VITISV_005164 [Vitis vinifera]   244   2e-62
ref|NP_001242697.1| uncharacterized protein LOC100816841 [Glycin...   243   6e-62

>ref|XP_002530997.1| conserved hypothetical protein [Ricinus communis]
           gi|223529424|gb|EEF31385.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 227

 Score =  262 bits (670), Expect = 9e-68
 Identities = 121/174 (69%), Positives = 145/174 (83%)
 Frame = +1

Query: 196 MGSKQGPPKHQNKFAWKPDAFNPKNETEVGGKRRPFSDITGVCPRCKTQIEWKRKYGKYK 375
           M  +QGPPKHQN+FAW+P+A +  NETEVGGK RP S+ITGVCPRCK QI+WKR+YGKYK
Sbjct: 1   MSKRQGPPKHQNRFAWQPNAGHKINETEVGGKLRPLSEITGVCPRCKEQIDWKRRYGKYK 60

Query: 376 PLSEPAKCQRCSKRAVRQAYHSLCSACAKDSNVCAKCLCHVERIVGRDLSEVEAEKKALE 555
           PLSEPAKCQ+CSKR VRQAYH+LC+ACAK+  VCAKC C V  I+GRD +E+EAE+K LE
Sbjct: 61  PLSEPAKCQQCSKRTVRQAYHNLCTACAKEQKVCAKCRCRVANIIGRDSAEIEAEQKMLE 120

Query: 556 DAIKNSRERDRRTLLRAMNKGTAGSSVIATTGEGKKVEELFTAASVDEYAGLSR 717
           +AIKN+RERDRR+LLRAMNKGT  SS    + EG KV +LF +AS++EYA  SR
Sbjct: 121 EAIKNARERDRRSLLRAMNKGTPKSSEKVASNEGNKVGDLFPSASLEEYAAKSR 174


>ref|XP_002305388.1| predicted protein [Populus trichocarpa] gi|222848352|gb|EEE85899.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  254 bits (650), Expect = 2e-65
 Identities = 115/174 (66%), Positives = 142/174 (81%)
 Frame = +1

Query: 196 MGSKQGPPKHQNKFAWKPDAFNPKNETEVGGKRRPFSDITGVCPRCKTQIEWKRKYGKYK 375
           M +KQGPPKHQN +AWKP+A    NETEVGG+ +P S+ITGVC RCK QI+WKR+YGKYK
Sbjct: 1   MSNKQGPPKHQNNYAWKPNAGRKINETEVGGRLKPLSEITGVCQRCKEQIDWKRRYGKYK 60

Query: 376 PLSEPAKCQRCSKRAVRQAYHSLCSACAKDSNVCAKCLCHVERIVGRDLSEVEAEKKALE 555
           PL+EPAKCQ+CSKR VRQAYH+LC+ACAK+  VCAKC CHV+RI+GRDL++VEAE+K LE
Sbjct: 61  PLTEPAKCQKCSKRTVRQAYHNLCTACAKEQKVCAKCRCHVDRIIGRDLADVEAEQKTLE 120

Query: 556 DAIKNSRERDRRTLLRAMNKGTAGSSVIATTGEGKKVEELFTAASVDEYAGLSR 717
           +AIKN+RERDRR L+RAMNKG         T EG +V +LF ++S++EYA   R
Sbjct: 121 EAIKNARERDRRALIRAMNKGKPMGLTKNPTNEGNRVGDLFPSSSLEEYAAKGR 174


>ref|XP_002281105.1| PREDICTED: uncharacterized protein LOC100241163 [Vitis vinifera]
           gi|298204468|emb|CBI16948.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  247 bits (631), Expect = 3e-63
 Identities = 119/174 (68%), Positives = 139/174 (79%)
 Frame = +1

Query: 196 MGSKQGPPKHQNKFAWKPDAFNPKNETEVGGKRRPFSDITGVCPRCKTQIEWKRKYGKYK 375
           M S++GPPKHQN +AWKP++ + KNETEVGGK RP+S+ITGVC RCK QIEWKR+YGKYK
Sbjct: 1   MSSRRGPPKHQNAYAWKPNSGHKKNETEVGGKLRPYSEITGVCARCKEQIEWKRRYGKYK 60

Query: 376 PLSEPAKCQRCSKRAVRQAYHSLCSACAKDSNVCAKCLCHVERIVGRDLSEVEAEKKALE 555
           PL EPAKCQRCSKRAVRQA+H LCSACAK+ N CAKC   V+ I+GRD SEVEAE+K LE
Sbjct: 61  PLIEPAKCQRCSKRAVRQAHHKLCSACAKEQNACAKCCSRVDNIIGRDCSEVEAEQKLLE 120

Query: 556 DAIKNSRERDRRTLLRAMNKGTAGSSVIATTGEGKKVEELFTAASVDEYAGLSR 717
           +AIKN+RERDRRTLLRAMNK  + SS    T +  KV E+  AAS+    G SR
Sbjct: 121 EAIKNARERDRRTLLRAMNKSISRSSAKNPTNKEDKVGEINPAASLGTCNGPSR 174


>emb|CAN66988.1| hypothetical protein VITISV_005164 [Vitis vinifera]
          Length = 713

 Score =  244 bits (624), Expect = 2e-62
 Identities = 116/166 (69%), Positives = 136/166 (81%)
 Frame = +1

Query: 196 MGSKQGPPKHQNKFAWKPDAFNPKNETEVGGKRRPFSDITGVCPRCKTQIEWKRKYGKYK 375
           M S++GPPKHQN +AWKP++ + KNETEVGGK RP+S+ITGVC RCK QIEWKR+YGKYK
Sbjct: 57  MSSRRGPPKHQNAYAWKPNSGHKKNETEVGGKLRPYSEITGVCARCKEQIEWKRRYGKYK 116

Query: 376 PLSEPAKCQRCSKRAVRQAYHSLCSACAKDSNVCAKCLCHVERIVGRDLSEVEAEKKALE 555
           PL EPAKCQRCSKRAVRQA+H LCSACAK+ N CAKC   V+ I+GRD SEVEAE+K LE
Sbjct: 117 PLIEPAKCQRCSKRAVRQAHHKLCSACAKEQNACAKCCSRVDNIIGRDCSEVEAEQKLLE 176

Query: 556 DAIKNSRERDRRTLLRAMNKGTAGSSVIATTGEGKKVEELFTAASV 693
           +AIKN+RERDRRTLLRAMNK  + SS    T +  KV E+  AAS+
Sbjct: 177 EAIKNARERDRRTLLRAMNKXISRSSAKNPTNKEDKVGEINPAASL 222


>ref|NP_001242697.1| uncharacterized protein LOC100816841 [Glycine max]
           gi|255636525|gb|ACU18601.1| unknown [Glycine max]
          Length = 248

 Score =  243 bits (620), Expect = 6e-62
 Identities = 117/172 (68%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
 Frame = +1

Query: 205 KQGPPKHQNKFAWKPDAFNPKNETEVGGKRRPFSDITGVCPRCKTQIEWKRKYGKYKPLS 384
           + GPPKHQNK+AWKP+A    NETEVGG+ RP S+ITGVC RCK QIEWKR+YGKYKPL 
Sbjct: 8   RSGPPKHQNKYAWKPNAGRKINETEVGGRFRPLSEITGVCSRCKDQIEWKRRYGKYKPLL 67

Query: 385 EPAKCQRCSKRAVRQAYHSLCSACAKDSNVCAKCLCHVERIVGRDLSEVEAEKKALEDAI 564
           +PAKCQ CSKRAVRQAYH+LC  CAK+  VCAKC C  ++IVGRD+SEVEAE+K LE+AI
Sbjct: 68  QPAKCQGCSKRAVRQAYHNLCPGCAKEHGVCAKCCCSTKQIVGRDISEVEAEQKMLEEAI 127

Query: 565 KNSRERDRRTLLRAMNKGTAGSSVIATTG-EGKKVEELFTAASVDEYAGLSR 717
           KNSRER+RR+LLRAMNK  + SS  A T  +G KV +LF  AS+++YA L+R
Sbjct: 128 KNSRERERRSLLRAMNKDKSKSSNSAPTDTKGNKVGQLFPNASLEDYAKLNR 179


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