BLASTX nr result

ID: Coptis24_contig00010009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010009
         (1237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279713.1| PREDICTED: CASP-like protein At2g36330 [Viti...   228   2e-57
gb|AFK43639.1| unknown [Medicago truncatula]                          214   4e-53
ref|XP_003550739.1| PREDICTED: CASP-like protein At2g36330-like ...   211   4e-52
ref|NP_181174.2| uncharacterized protein [Arabidopsis thaliana] ...   204   4e-50
ref|XP_002511409.1| conserved hypothetical protein [Ricinus comm...   204   5e-50

>ref|XP_002279713.1| PREDICTED: CASP-like protein At2g36330 [Vitis vinifera]
          Length = 314

 Score =  228 bits (582), Expect = 2e-57
 Identities = 114/163 (69%), Positives = 128/163 (78%)
 Frame = +1

Query: 463 VSSILWRERRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCIS 642
           V+SI+ R RR  MVKRA LGFRV  VVFCLISFSVMAADKTQGW+GDSF RYKEYRYC+S
Sbjct: 150 VTSIVRRSRREDMVKRAELGFRVCEVVFCLISFSVMAADKTQGWSGDSFDRYKEYRYCLS 209

Query: 643 VTVIGFVYAGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXXRVDD 822
           +TVI FVY+GFQA DLAY L+T KH+  +H RY  +F MDQ+L Y           RVDD
Sbjct: 210 MTVIAFVYSGFQACDLAYHLVTQKHMFSNHSRYHLNFFMDQVLAYLLMSASSSAATRVDD 269

Query: 823 WVSNFGKDDFTVMASASTGMSFLAFVTFAFSSLISGYNLCTRS 951
           W SN+GKD+FT MASAS GMSFLAFV FAFSSLISGYNLC R+
Sbjct: 270 WQSNWGKDEFTEMASASIGMSFLAFVAFAFSSLISGYNLCNRN 312


>gb|AFK43639.1| unknown [Medicago truncatula]
          Length = 288

 Score =  214 bits (545), Expect = 4e-53
 Identities = 102/150 (68%), Positives = 116/150 (77%)
 Frame = +1

Query: 499 MVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIGFVYAGFQ 678
           M  + ALGFR+  VV CLISFSVMAADKTQGW+GDSF RYKEYRYC+S+TVIGFVYAGFQ
Sbjct: 137 MTGKVALGFRISEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGFVYAGFQ 196

Query: 679 AYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXXRVDDWVSNFGKDDFTV 858
           A +L Y LIT KHI+ HH R+ FDF MDQ+L Y           RVDDW SN+GKD+FT 
Sbjct: 197 ACELGYQLITGKHIVNHHLRFHFDFLMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTE 256

Query: 859 MASASTGMSFLAFVTFAFSSLISGYNLCTR 948
           MASAS  ++FLAF+ FA SSLISGYNLC R
Sbjct: 257 MASASIALAFLAFIAFAISSLISGYNLCNR 286


>ref|XP_003550739.1| PREDICTED: CASP-like protein At2g36330-like [Glycine max]
          Length = 262

 Score =  211 bits (536), Expect = 4e-52
 Identities = 103/153 (67%), Positives = 116/153 (75%)
 Frame = +1

Query: 487 RRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIGFVY 666
           +R  M K+ ALGFR+  VV CLISFSVMAADKT+GW+GDSF RYKEYRYC+SV VI FVY
Sbjct: 107 KREMMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVY 166

Query: 667 AGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXXRVDDWVSNFGKD 846
           A FQA DLAY ++T + II HH RY FDF MDQ+L Y           RVDDW SN+GKD
Sbjct: 167 AAFQACDLAYQVVTGRRIINHHLRYHFDFFMDQVLAYLLVSAASSAATRVDDWQSNWGKD 226

Query: 847 DFTVMASASTGMSFLAFVTFAFSSLISGYNLCT 945
           DFT MASAS  ++FLAFV FA SSLISGYNLCT
Sbjct: 227 DFTEMASASIALTFLAFVAFAISSLISGYNLCT 259


>ref|NP_181174.2| uncharacterized protein [Arabidopsis thaliana]
           gi|75148783|sp|Q84WP5.1|CSPL8_ARATH RecName:
           Full=CASP-like protein At2g36330
           gi|27754604|gb|AAO22748.1| unknown protein [Arabidopsis
           thaliana] gi|330254140|gb|AEC09234.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 283

 Score =  204 bits (519), Expect = 4e-50
 Identities = 102/159 (64%), Positives = 121/159 (76%)
 Frame = +1

Query: 463 VSSILWRERRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCIS 642
           VS+IL R RR  +VK +ALGFR+  VV  LISFS+MAADKT+GW+GDSF RYKEYR+C+S
Sbjct: 119 VSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLS 178

Query: 643 VTVIGFVYAGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXXRVDD 822
           V V+ FVY+ FQA DLAY L+  KH+I HH R  F+F +DQ+L Y           RVDD
Sbjct: 179 VNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTRVDD 238

Query: 823 WVSNFGKDDFTVMASASTGMSFLAFVTFAFSSLISGYNL 939
           WVSN+GKD+FT MASAS  MSFLAF+ FAFSSLISGYNL
Sbjct: 239 WVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNL 277


>ref|XP_002511409.1| conserved hypothetical protein [Ricinus communis]
           gi|223550524|gb|EEF52011.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score =  204 bits (518), Expect = 5e-50
 Identities = 100/160 (62%), Positives = 115/160 (71%)
 Frame = +1

Query: 478 WRERRLGMVKRAALGFRVLGVVFCLISFSVMAADKTQGWAGDSFYRYKEYRYCISVTVIG 657
           WR  R   +K A LGFR+  VV CLISFSVMAADKTQGW+GDS+ RY+EYRYC+SV VI 
Sbjct: 147 WRSGREEKMKVAELGFRISEVVLCLISFSVMAADKTQGWSGDSYDRYREYRYCLSVNVIA 206

Query: 658 FVYAGFQAYDLAYDLITAKHIIQHHFRYSFDFSMDQILTYXXXXXXXXXXXRVDDWVSNF 837
           FVY+GFQAYDL+Y L T KH+I HH R  F+F MDQIL Y           RVDDW SN+
Sbjct: 207 FVYSGFQAYDLSYHLATGKHVIGHHLRRHFNFFMDQILAYLLISASSSAATRVDDWQSNW 266

Query: 838 GKDDFTVMASASTGMSFLAFVTFAFSSLISGYNLCTRSET 957
           GKD+FT MA+AS  M+ LAF+ FA SSLISGYNL     T
Sbjct: 267 GKDEFTEMATASVAMALLAFIAFAVSSLISGYNLYNNGST 306


Top