BLASTX nr result

ID: Coptis24_contig00010000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010000
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250...    89   1e-15
ref|XP_003634307.1| PREDICTED: uncharacterized protein LOC100853...    81   3e-13

>ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250232 [Vitis vinifera]
          Length = 223

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
 Frame = +1

Query: 121 RENVMPLELAIKRELDYRMRVE----SLQGKINVEASLLSQXXXXXXXXSIVGRKRR--T 282
           R  VMPLELA+KREL YR +V+     L G ++ E  + S            G KR+  T
Sbjct: 5   RGEVMPLELAMKRELAYRKKVDRLLLQLHGGVSRENPVPSSSPRPSSGSKFSGIKRKAPT 64

Query: 283 MSSNLRSFSTQQPRSSNGS-----SPLLCTLCQVAFSSKSALRQHRLDSKHKAKLAENHK 447
            S N +     QP   + +       L C +CQV  S  ++L+QH L  KHK +L +N  
Sbjct: 65  SSFNCQPRQMLQPVDHSNTLKTQRDDLFCKVCQVPCSGANSLKQHLLGQKHKDRL-QNLT 123

Query: 448 KS----KQGKNKPQWCKLCRISCSDERAFTQHLAGKKHAASVHAIE 573
            S    ++G  +  WC+LC+I C ++ +F  HL GKKH +   A+E
Sbjct: 124 PSMGIGEEGAKQRLWCELCKIWCMNKNSFKDHLKGKKHQSRAQAVE 169


>ref|XP_003634307.1| PREDICTED: uncharacterized protein LOC100853199 [Vitis vinifera]
           gi|297733926|emb|CBI15173.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
 Frame = +1

Query: 121 RENVMPLELAIKRELDYRMRVE----SLQGKINVEASLLSQ--XXXXXXXXSIVGRKRRT 282
           R +VMPLELA+KRE  YR +VE     L G  + E    SQ          S+ G KR+T
Sbjct: 6   RGDVMPLELAMKRESAYRKKVEMMLSQLYGGESREDPFSSQVPSSSPSSGPSLSGPKRKT 65

Query: 283 MSSNLRSFSTQQPR-------SSNGSSPLLCTLCQVAFSSKSALRQHRLDSKHK--AKLA 435
            +   +    QQ +         N    L C +CQVA  S   L+QH +  KHK    L 
Sbjct: 66  PTRTSQCLPPQQLQLLYSSHTLGNRKDDLFCKVCQVACPSSFHLKQHLIGQKHKDTLDLK 125

Query: 436 ENHKKSKQGKNKPQWCKLCRISCSDERAFTQHLAGKKHAASVHAIE 573
                 ++  N  +WC LC+I C ++ +  QH  GKKH  +V  +E
Sbjct: 126 SGRNIREEDANTRKWCDLCKIWCINKYSLEQHFKGKKHQDNVQELE 171


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