BLASTX nr result

ID: Coptis24_contig00009994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009994
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis...   321   2e-85
ref|XP_002327167.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85
gb|ABK93839.1| unknown [Populus trichocarpa]                          318   2e-84
ref|XP_002301170.1| predicted protein [Populus trichocarpa] gi|2...   308   2e-81
ref|XP_002510184.1| transcription factor, putative [Ricinus comm...   305   8e-81

>ref|XP_002284927.1| PREDICTED: WUSCHEL-related homeobox 4 [Vitis vinifera]
           gi|147773642|emb|CAN76463.1| hypothetical protein
           VITISV_017034 [Vitis vinifera]
           gi|302142285|emb|CBI19488.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  321 bits (822), Expect = 2e-85
 Identities = 163/210 (77%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
 Frame = -3

Query: 955 KVHQLTRGFWEHEPSLSLGCKRLRPLAPKLTNSDSSVTTLDLKSFIKSDCGPRKVGCYDE 776
           KVHQ  RGFWEHEPSL+LGCKRLRPLAPKL NSDS V   DLKSFI+ + GPRK+GC D+
Sbjct: 5   KVHQFARGFWEHEPSLTLGCKRLRPLAPKLANSDS-VAAFDLKSFIRPESGPRKLGCSDD 63

Query: 775 KRDSPPQVEAHSGGTRWNPTQEQIGILEMLYKGGMRTPNAHQIEHITAQLGKYGKIEGKN 596
           KRDSP QVE H GGTRWNPTQEQIGILEMLYK GMRTPNA QIE ITAQLGKYGKIEGKN
Sbjct: 64  KRDSP-QVETHPGGTRWNPTQEQIGILEMLYKSGMRTPNAQQIEQITAQLGKYGKIEGKN 122

Query: 595 VFYWFQNHKARERQKQKRNSLGLMHSPRT-LGATTINSDASGEGEREEDSHYKRKHRSWV 419
           VFYWFQNHKARERQKQKRNSLGL H PRT    TTI  D   E  REEDS  KRK +SW 
Sbjct: 123 VFYWFQNHKARERQKQKRNSLGLGHCPRTPTSITTITLDTRVEVGREEDSPNKRKCKSWT 182

Query: 418 IECFEEDNRLYEEQGKDKTLELFPLHPEGR 329
            E  EE+NR Y E+G DKTLELFPLHPEGR
Sbjct: 183 FETVEENNRYYREEG-DKTLELFPLHPEGR 211


>ref|XP_002327167.1| predicted protein [Populus trichocarpa] gi|222835482|gb|EEE73917.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  320 bits (821), Expect = 2e-85
 Identities = 161/211 (76%), Positives = 176/211 (83%), Gaps = 2/211 (0%)
 Frame = -3

Query: 955 KVHQLTRGFWEHEPSLSLGCKRLRPLAPKLTNSDSSVTTLDLKSFIKSDCGPRKVGCYDE 776
           KVHQL RGFWEHEPSL+LGCKRLRPLAPKL N+D SVT+ DLKSFI+ D GPRK+   DE
Sbjct: 5   KVHQLARGFWEHEPSLTLGCKRLRPLAPKLANTDHSVTSFDLKSFIRPDSGPRKLASSDE 64

Query: 775 KRDSPPQVEAHSGGTRWNPTQEQIGILEMLYKGGMRTPNAHQIEHITAQLGKYGKIEGKN 596
           K+DSP Q E H GGTRWNPTQEQIGILEMLY+GGMRTPN  QIE ITAQL +YGKIEGKN
Sbjct: 65  KKDSP-QGETHPGGTRWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKN 123

Query: 595 VFYWFQNHKARERQKQKRNSLGLMHSPRTLGATTINS-DASGEGEREEDSHYKRKHRSWV 419
           VFYWFQNHKARERQKQKRNSLGL HSPRT    TI S D  GE E++EDS YKRK RSW 
Sbjct: 124 VFYWFQNHKARERQKQKRNSLGLSHSPRTPSPITIISLDTRGEVEKDEDSPYKRKCRSWS 183

Query: 418 IECFE-EDNRLYEEQGKDKTLELFPLHPEGR 329
            ECFE E++R  +E+G D+TLELFPLHPEGR
Sbjct: 184 FECFELEESRSCKEEG-DRTLELFPLHPEGR 213


>gb|ABK93839.1| unknown [Populus trichocarpa]
          Length = 213

 Score =  318 bits (814), Expect = 2e-84
 Identities = 160/211 (75%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
 Frame = -3

Query: 955 KVHQLTRGFWEHEPSLSLGCKRLRPLAPKLTNSDSSVTTLDLKSFIKSDCGPRKVGCYDE 776
           KVHQL RGFWEHEPSL+LGCKRLRPLAPKL N+D SVT+ DLKSFI+ D GPRK+   DE
Sbjct: 5   KVHQLARGFWEHEPSLTLGCKRLRPLAPKLANTDHSVTSFDLKSFIRPDSGPRKLASSDE 64

Query: 775 KRDSPPQVEAHSGGTRWNPTQEQIGILEMLYKGGMRTPNAHQIEHITAQLGKYGKIEGKN 596
           K+DSP Q E H GGTRWNPTQEQIGILEMLY+GGMRTPN  QIE ITAQL +YGKIEGKN
Sbjct: 65  KKDSP-QGETHPGGTRWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKN 123

Query: 595 VFYWFQNHKARERQKQKRNSLGLMHSPRTLGATTINS-DASGEGEREEDSHYKRKHRSWV 419
           VFYWFQNHKARERQKQKRNSLGL HSPRT    TI S D  GE E++EDS YK K RSW 
Sbjct: 124 VFYWFQNHKARERQKQKRNSLGLSHSPRTPSPITIISLDTRGEVEKDEDSPYKGKCRSWS 183

Query: 418 IECFE-EDNRLYEEQGKDKTLELFPLHPEGR 329
            ECFE E++R  +E+G D+TLELFPLHPEGR
Sbjct: 184 FECFELEESRSCKEEG-DRTLELFPLHPEGR 213


>ref|XP_002301170.1| predicted protein [Populus trichocarpa] gi|222842896|gb|EEE80443.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  308 bits (788), Expect = 2e-81
 Identities = 157/211 (74%), Positives = 168/211 (79%), Gaps = 2/211 (0%)
 Frame = -3

Query: 955 KVHQLTRGFWEHEPSLSLGCKRLRPLAPKLTNSDSSVTTLDLKSFIKSDCGPRKVGCYDE 776
           KVHQL RGFWEHEP L+LG KRLRPLAPKL N+D S  + DLKSFI+ D GPR +   DE
Sbjct: 5   KVHQLARGFWEHEPFLTLGFKRLRPLAPKLANTDHSAASFDLKSFIRPDSGPRNLASSDE 64

Query: 775 KRDSPPQVEAHSGGTRWNPTQEQIGILEMLYKGGMRTPNAHQIEHITAQLGKYGKIEGKN 596
           K+DSP Q E H GGTRWNPTQEQIGILEMLY+GGMRTPN  QIE ITAQL +YGKIEGKN
Sbjct: 65  KKDSP-QGETHPGGTRWNPTQEQIGILEMLYRGGMRTPNGQQIEDITAQLSRYGKIEGKN 123

Query: 595 VFYWFQNHKARERQKQKRNSLGLMHSPRTLGATTINS-DASGEGEREEDSHYKRKHRSWV 419
           VFYWFQNHKARERQKQKRNSLGL HSPRT    TI S D  GE E EEDS YKRK RSW 
Sbjct: 124 VFYWFQNHKARERQKQKRNSLGLSHSPRTPSPVTIISLDTRGEVEGEEDSPYKRKCRSWT 183

Query: 418 IECFE-EDNRLYEEQGKDKTLELFPLHPEGR 329
            EC E ED+R   E+G D+TLELFPLHPEGR
Sbjct: 184 FECLELEDSRSCREKG-DRTLELFPLHPEGR 213


>ref|XP_002510184.1| transcription factor, putative [Ricinus communis]
           gi|223550885|gb|EEF52371.1| transcription factor,
           putative [Ricinus communis]
          Length = 228

 Score =  305 bits (782), Expect = 8e-81
 Identities = 158/224 (70%), Positives = 178/224 (79%), Gaps = 15/224 (6%)
 Frame = -3

Query: 955 KVHQLTRGFWEHEP-SLSLGCKRLRPLAPKL-----------TNSDSSVTTLDLKSFIKS 812
           KVHQL RGFWEHE  SLSLGCKRLRPLAPKL           TN+ +SV++ DLKSFI+ 
Sbjct: 5   KVHQLARGFWEHEQTSLSLGCKRLRPLAPKLANNTTTTATEITNTITSVSSFDLKSFIRP 64

Query: 811 DCGPRKVGCYDEKRDSPPQVEAHSGGTRWNPTQEQIGILEMLYKGGMRTPNAHQIEHITA 632
           + GPRK+G  ++K+DSPPQVE H GGTRWNPTQEQIGILEMLY+GGMRTPNA QIE ITA
Sbjct: 65  ESGPRKLGSSEDKKDSPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITA 124

Query: 631 QLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLMHSPRTLG-ATTINSDASGEG-ERE 458
           QL +YGKIEGKNVFYWFQNHKARERQKQKRNSLGL HSPRT G  TTI+ +  GE  E++
Sbjct: 125 QLSRYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPGPITTISLETKGEVLEKD 184

Query: 457 EDSHYKRKHRSWVIECFE-EDNRLYEEQGKDKTLELFPLHPEGR 329
           EDS YKRK RSW  EC E E++R    +  D+TLELFPLHPEGR
Sbjct: 185 EDSPYKRKCRSWGFECLELEESRSSCREEGDRTLELFPLHPEGR 228


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