BLASTX nr result

ID: Coptis24_contig00009975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009975
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512959.1| beta-galactosidase, putative [Ricinus commun...    56   2e-14
dbj|BAF31234.1| beta-D-galactosidase [Persea americana]                55   3e-14
ref|XP_002274449.2| PREDICTED: beta-galactosidase 3 [Vitis vinif...    56   5e-14
emb|CBI17431.3| unnamed protein product [Vitis vinifera]               56   5e-14
ref|XP_004146490.1| PREDICTED: beta-galactosidase 3-like [Cucumi...    55   3e-13

>ref|XP_002512959.1| beta-galactosidase, putative [Ricinus communis]
           gi|223547970|gb|EEF49462.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 732

 Score = 55.8 bits (133), Expect(2) = 2e-14
 Identities = 22/25 (88%), Positives = 25/25 (100%)
 Frame = -1

Query: 174 YDYDAPIDEYGLVRQPKFGHLKNLH 100
           YDYDAPIDEYGL+RQPK+GHLK+LH
Sbjct: 313 YDYDAPIDEYGLIRQPKYGHLKDLH 337



 Score = 47.8 bits (112), Expect(2) = 2e-14
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -2

Query: 95  AIKLCEGALISVDPVTTSLGSFQQENVFSSN 3
           AIKLCE AL+S DPV T+LGS++Q +VFSSN
Sbjct: 339 AIKLCERALLSSDPVVTTLGSYEQAHVFSSN 369


>dbj|BAF31234.1| beta-D-galactosidase [Persea americana]
          Length = 849

 Score = 55.5 bits (132), Expect(2) = 3e-14
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 174 YDYDAPIDEYGLVRQPKFGHLKNLH 100
           YDYDAPIDEYGL+RQPK+GHLK LH
Sbjct: 315 YDYDAPIDEYGLIRQPKYGHLKELH 339



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -2

Query: 95  AIKLCEGALISVDPVTTSLGSFQQENVFSS 6
           AIKLCE ALIS DP+ TSLG +QQ +VFSS
Sbjct: 341 AIKLCEPALISADPIVTSLGPYQQSHVFSS 370


>ref|XP_002274449.2| PREDICTED: beta-galactosidase 3 [Vitis vinifera]
          Length = 898

 Score = 55.8 bits (133), Expect(2) = 5e-14
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -1

Query: 174 YDYDAPIDEYGLVRQPKFGHLKNLH 100
           YDYDAPIDEYGLVRQPK+GHLK LH
Sbjct: 366 YDYDAPIDEYGLVRQPKYGHLKELH 390



 Score = 46.2 bits (108), Expect(2) = 5e-14
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = -2

Query: 95  AIKLCEGALISVDPVTTSLGSFQQENVFSSN 3
           +IKLCE AL+S DP+ +SLGSFQQ +V+SS+
Sbjct: 392 SIKLCERALVSADPIVSSLGSFQQAHVYSSD 422


>emb|CBI17431.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 55.8 bits (133), Expect(2) = 5e-14
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = -1

Query: 174 YDYDAPIDEYGLVRQPKFGHLKNLH 100
           YDYDAPIDEYGLVRQPK+GHLK LH
Sbjct: 313 YDYDAPIDEYGLVRQPKYGHLKELH 337



 Score = 46.2 bits (108), Expect(2) = 5e-14
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = -2

Query: 95  AIKLCEGALISVDPVTTSLGSFQQENVFSSN 3
           +IKLCE AL+S DP+ +SLGSFQQ +V+SS+
Sbjct: 339 SIKLCERALVSADPIVSSLGSFQQAHVYSSD 369


>ref|XP_004146490.1| PREDICTED: beta-galactosidase 3-like [Cucumis sativus]
           gi|449500002|ref|XP_004160975.1| PREDICTED:
           beta-galactosidase 3-like [Cucumis sativus]
          Length = 846

 Score = 54.7 bits (130), Expect(2) = 3e-13
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -1

Query: 174 YDYDAPIDEYGLVRQPKFGHLKNLH 100
           YDYDAPIDEYGL+RQPK+GHLK LH
Sbjct: 312 YDYDAPIDEYGLLRQPKYGHLKELH 336



 Score = 45.1 bits (105), Expect(2) = 3e-13
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -2

Query: 95  AIKLCEGALISVDPVTTSLGSFQQENVFSS 6
           AIK+CE AL+S DP+ TSLG +QQ +V+SS
Sbjct: 338 AIKMCEPALVSADPIVTSLGDYQQAHVYSS 367


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