BLASTX nr result

ID: Coptis24_contig00009970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009970
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633622.1| PREDICTED: uncharacterized protein LOC100855...    86   7e-15
emb|CBI39695.3| unnamed protein product [Vitis vinifera]               86   7e-15
emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]    82   8e-14
ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230...    61   2e-07

>ref|XP_003633622.1| PREDICTED: uncharacterized protein LOC100855297 [Vitis vinifera]
          Length = 185

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
 Frame = -3

Query: 536 RRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQKCGNGSLAFGSSMVEKVMNARKLGG 357
           RRQ CSPS++R RK +F KQE +G++TT  +K   +  NG+   GS MV+KVMNARK G 
Sbjct: 68  RRQLCSPSVARNRKVQF-KQESEGNLTT--QKGRTQTANGAQVLGSRMVDKVMNARKSGA 124

Query: 356 EELERKPKFGTPSNENSGLGRFASKGCMDIALKNKHVEK-MSDANPVMMNIKTASMNSSS 180
           EE E KP       EN   GR  SK  +D+ALK+  +++  S++  + +  +  +  S+S
Sbjct: 125 EERETKPNLRGLITENPAYGRTTSKSSLDMALKHMDIKREQSNSRNISLGRRFKTSGSTS 184


>emb|CBI39695.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
 Frame = -3

Query: 536 RRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQKCGNGSLAFGSSMVEKVMNARKLGG 357
           RRQ CSPS++R RK +F KQE +G++TT  +K   +  NG+   GS MV+KVMNARK G 
Sbjct: 277 RRQLCSPSVARNRKVQF-KQESEGNLTT--QKGRTQTANGAQVLGSRMVDKVMNARKSGA 333

Query: 356 EELERKPKFGTPSNENSGLGRFASKGCMDIALKNKHVEK-MSDANPVMMNIKTASMNSSS 180
           EE E KP       EN   GR  SK  +D+ALK+  +++  S++  + +  +  +  S+S
Sbjct: 334 EERETKPNLRGLITENPAYGRTTSKSSLDMALKHMDIKREQSNSRNISLGRRFKTSGSTS 393


>emb|CAN77579.1| hypothetical protein VITISV_015345 [Vitis vinifera]
          Length = 1494

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 46/94 (48%), Positives = 60/94 (63%)
 Frame = -3

Query: 536 RRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQKCGNGSLAFGSSMVEKVMNARKLGG 357
           +RQ CSPS++R RK +F KQE +G++TT  +K   +  NG+   GS MV+KVMNARK G 
Sbjct: 277 KRQLCSPSVARNRKVQF-KQESEGNLTT--QKGRTQTANGAQILGSRMVDKVMNARKSGA 333

Query: 356 EELERKPKFGTPSNENSGLGRFASKGCMDIALKN 255
           EE E KP       EN   GR  SK  +D+ALK+
Sbjct: 334 EERETKPNLRGLITENPAYGRTTSKSSLDMALKH 367


>ref|XP_002315099.1| predicted protein [Populus trichocarpa] gi|222864139|gb|EEF01270.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
 Frame = -3

Query: 554 EDPI-QTRRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQKCGNGSLAFGSSMVEKVM 378
           +DP  + RRQSCSPS++RGRK      E + +  T +K K     NG+  FGS MV+KVM
Sbjct: 275 QDPAPRPRRQSCSPSVTRGRK------ESNEENLTTSKGKTVTGNNGAQIFGSRMVDKVM 328

Query: 377 NARKLGGEELERKPK-FGTPSNENS--------GLGR--FASKGCMDIALKNKHVEK 240
           NARKLG EE E KPK  G   + NS        G GR    +K  MD+A K+  + K
Sbjct: 329 NARKLGAEEREAKPKQQGATKSANSSANASPSHGFGRMMMTTKSQMDMAFKHMVIAK 385


>ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230836, partial [Cucumis
           sativus]
          Length = 435

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
 Frame = -3

Query: 536 RRQSCSPSMSRGRKPEFSKQERDGDVTTITKKKNQKCGNGS-LAFGSSMVEKVMNARKLG 360
           RRQSCSP  SRGR P  +     G V  I +  ++   N S +  G+ MVE+V+N RKL 
Sbjct: 250 RRQSCSP--SRGRAPNGNIHLSGGSVPAINRMHSKANDNISPVLIGTKMVERVINMRKLV 307

Query: 359 GEELERKPKF-------GTPSNENSGLGRFASKGCMDIALKNKHVEKMSDAN--PVMMNI 207
             + + K           + S ++SG GR  SK  +D+A+++  + +    N  P+M NI
Sbjct: 308 PPKQDDKHSSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGNLRPLMTNI 367

Query: 206 KTASMNS-SSDPSKRTTQS 153
             +SM S  S PS+  T S
Sbjct: 368 PASSMYSVRSGPSRSRTIS 386


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