BLASTX nr result

ID: Coptis24_contig00009960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009960
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...   189   2e-46
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...   189   2e-46
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...   184   5e-45
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...   183   1e-44

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/156 (60%), Positives = 121/156 (77%)
 Frame = +2

Query: 8   STICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVG 187
           ST+CHVTNI+LK L+L G +PD+F NLT+L+EIDLTR++L GSIP S A +PLV LS +G
Sbjct: 250 STVCHVTNIQLKGLNLTGIMPDEFGNLTYLQEIDLTRNYLNGSIPTSLAQIPLVTLSALG 309

Query: 188 NLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFA 367
           N + G+IP EIG+I+TLEEL+L+DN L G++P  LG L  L  + L+ NNFTG +PETF 
Sbjct: 310 NRLSGSIPKEIGDIATLEELVLEDNQLEGSLPENLGNLSSLSRLLLTANNFTGTIPETFG 369

Query: 368 NLKNLKDFLIGGSGITGRIPGFIGEWTGLERLDMQG 475
           NLKNL D  + G+  +G+IP FIG WT L+RLDMQG
Sbjct: 370 NLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQG 405



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/142 (26%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
 Frame = +2

Query: 20  HVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVGNLIG 199
           ++T++RL   +  G++PD   N T L  +D+  + + G IP + + L  +    + +L G
Sbjct: 373 NLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISLLTNLTQLRIADLNG 432

Query: 200 GTIPI-EIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFANLK 376
            ++    + N++ +EEL+L++ ++T +IP  +GK+  LK + LS N  +G++ +T+ +L 
Sbjct: 433 SSMAFPNLQNLTKMEELVLRNCSITDSIPDYIGKMASLKTLDLSFNRLSGQVSDTW-SLS 491

Query: 377 NLKDFLIGGSGITGRIPGFIGE 442
            L+   +  + ++G +P +I +
Sbjct: 492 QLEYLFLTNNSLSGTLPSWISD 513


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/156 (57%), Positives = 117/156 (75%)
 Frame = +2

Query: 8   STICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVG 187
           ST+CHVT + LK L+L G  P +F NLT L+E+DLTR+ + G +P S A+ PLVKLSL+G
Sbjct: 48  STLCHVTIVLLKGLNLTGTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLG 107

Query: 188 NLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFA 367
           N + G+IP EIG I TLEEL+L+DN LTG++P  LG L  L+ + LS NNFTGK+P++F 
Sbjct: 108 NRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGNLNSLRRLLLSANNFTGKIPDSFG 167

Query: 368 NLKNLKDFLIGGSGITGRIPGFIGEWTGLERLDMQG 475
            L NL DF + G+G++G+IP FIG W  L+RLDMQG
Sbjct: 168 KLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQG 203



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = +2

Query: 14  ICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVGNL 193
           + ++ + R+    L G++P+   N   L  +D+  + +   IP + + L  +    + +L
Sbjct: 169 LTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTISQLKNLTQLRISDL 228

Query: 194 IGGTIPI-EIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFAN 370
            G  I    + ++  ++EL+L++  + G+IP  +G++  L  + LS N+  G +PETF N
Sbjct: 229 KGSFISFPNLTDMINMKELVLRNCLINGSIPEYIGEMNKLSTLDLSFNHLNGDIPETFQN 288

Query: 371 LKNLK-DFL-IGGSGITGRIPGFI 436
           L   K DF+ +  + ++G +PG+I
Sbjct: 289 LMKRKIDFMFLTNNSLSGEVPGWI 312


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/156 (57%), Positives = 117/156 (75%)
 Frame = +2

Query: 8   STICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVG 187
           ST+CHVT + LK L+L G  P +F NLT L+E+DLTR+ + G +P S A+ PLVKLSL+G
Sbjct: 85  STLCHVTIVLLKGLNLTGTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLG 144

Query: 188 NLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFA 367
           N + G+IP EIG I TLEEL+L+DN LTG++P  LG L  L+ + LS NNFTGK+P++F 
Sbjct: 145 NRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGNLNSLRRLLLSANNFTGKIPDSFG 204

Query: 368 NLKNLKDFLIGGSGITGRIPGFIGEWTGLERLDMQG 475
            L NL DF + G+G++G+IP FIG W  L+RLDMQG
Sbjct: 205 KLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQG 240



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = +2

Query: 14  ICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVGNL 193
           + ++ + R+    L G++P+   N   L  +D+  + +   IP + + L  +    + +L
Sbjct: 206 LTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTISQLKNLTQLRISDL 265

Query: 194 IGGTIPI-EIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFAN 370
            G  I    + ++  ++EL+L++  + G+IP  +G++  L  + LS N+  G +PETF N
Sbjct: 266 KGSFISFPNLTDMINMKELVLRNCLINGSIPEYIGEMNKLSTLDLSFNHLNGDIPETFQN 325

Query: 371 LKNLK-DFL-IGGSGITGRIPGFI 436
           L   K DF+ +  + ++G +PG+I
Sbjct: 326 LMKRKIDFMFLTNNSLSGEVPGWI 349


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/156 (57%), Positives = 120/156 (76%)
 Frame = +2

Query: 8   STICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVG 187
           +T+C VT+IRLK L+L G LP  FANLT L++IDLTR+ ++GSIPK +A +PLV LS++G
Sbjct: 87  TTVCRVTSIRLKGLNLTGTLPAAFANLTQLQKIDLTRNLISGSIPKEFAQIPLVDLSMLG 146

Query: 188 NLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFA 367
           N + G IP EIG+I+TLE L+L+DN LTG +P  LG+L  L+ + LS NNF G +P ++ 
Sbjct: 147 NRLSGPIPQEIGDIATLEHLVLEDNLLTGNLPESLGRLSRLQRLLLSVNNFNGTIPRSYG 206

Query: 368 NLKNLKDFLIGGSGITGRIPGFIGEWTGLERLDMQG 475
           NLKNL DF I G+ ++GR+P FIG WT LERLD+QG
Sbjct: 207 NLKNLTDFRIDGNDVSGRLPEFIGNWTKLERLDLQG 242



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
 Frame = +2

Query: 20  HVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVKLSLVGNLIG 199
           ++T+ R+    + G LP+   N T L  +DL  + +   IP+  + L  +    + +L G
Sbjct: 210 NLTDFRIDGNDVSGRLPEFIGNWTKLERLDLQGTSMETPIPRGISDLKNLTELRITDLKG 269

Query: 200 GTIPIEIGNIS---TLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPETFAN 370
             +P    N++   +L+EL+L++  +   IP  +G   GLK + LS N  +G +P+TF N
Sbjct: 270 --LPTSFPNLTQLTSLKELVLRNCLIRDRIPEYIGLFSGLKTLDLSFNELSGPIPDTFQN 327

Query: 371 LKNLKDFL-IGGSGITGRIPGFI 436
           L+ +  FL +  + ++G++P +I
Sbjct: 328 LERVTQFLFLTNNSLSGQVPSWI 350


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/159 (56%), Positives = 117/159 (73%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   NASTICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLP-LVKLS 178
           N+ST+CHVT I LK L++ G  P +F NLT L+ +DLTR+++ GSIPKS   L  LV LS
Sbjct: 87  NSSTVCHVTMIFLKGLNISGIFPSEFGNLTHLKTLDLTRNYINGSIPKSLGGLSSLVTLS 146

Query: 179 LVGNLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLSGNNFTGKLPE 358
           L+GN + G IP EIG+ISTL+E+ ++DN L G +P  LG L+ L+ + LS NNFTG +PE
Sbjct: 147 LLGNRLSGPIPSEIGDISTLQEMNVEDNQLEGNLPPNLGNLKNLQKLMLSANNFTGTIPE 206

Query: 359 TFANLKNLKDFLIGGSGITGRIPGFIGEWTGLERLDMQG 475
            F NLKNL +F I GS ++G+IP FIG WT LERLD+QG
Sbjct: 207 AFGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQG 245



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
 Frame = +2

Query: 14  ICHVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLP-LVKLSLVGN 190
           I  +  + ++   LEG LP +  NL  L+++ L+ +  TG+IP+++ +L  L    + G+
Sbjct: 163 ISTLQEMNVEDNQLEGNLPPNLGNLKNLQKLMLSANNFTGTIPEAFGNLKNLTNFRIDGS 222

Query: 191 LIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKLRGLKVVHLS---GNN-------- 337
            + G IP  IGN + LE L LQ  +L G IP  +  L+ LK + +S   GN         
Sbjct: 223 SLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPAVSVLKNLKELRISDLKGNTTMTFPDLK 282

Query: 338 --------------FTGKLPETFANLKNLKDFLIGGSGITGRIPG 430
                          TG +P+    L+NLK   +  + +TG IPG
Sbjct: 283 DLKRMQRLELRNCLITGPIPDYIGELENLKTIDLSSNRLTGPIPG 327



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
 Frame = +2

Query: 20  HVTNIRLKSLSLEGELPDDFANLTFLREIDLTRSFLTGSIPKSWASLPLVK--------- 172
           ++TN R+   SL G++P    N T L  +DL  + L G IP + + L  +K         
Sbjct: 213 NLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPAVSVLKNLKELRISDLKG 272

Query: 173 -----------------LSLVGNLIGGTIPIEIGNISTLEELLLQDNNLTGTIPGELGKL 301
                            L L   LI G IP  IG +  L+ + L  N LTG IPG L  L
Sbjct: 273 NTTMTFPDLKDLKRMQRLELRNCLITGPIPDYIGELENLKTIDLSSNRLTGPIPGSLEDL 332

Query: 302 RGLKVVHLSGNNFTGKLP 355
             +  V L+ N+  G +P
Sbjct: 333 ESINFVFLTNNSLNGTIP 350


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