BLASTX nr result
ID: Coptis24_contig00009944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009944
(1702 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003384917.1| PREDICTED: protein RIC1 homolog [Amphimedon ... 122 2e-25
gb|ACA50099.1| reverse transcriptase-like protein [Ectropis obli... 101 4e-22
gb|AFI41156.1| reverse transcriptase [Magnaporthe oryzae] gi|385... 80 9e-21
ref|XP_571046.1| hypothetical protein [Cryptococcus neoformans v... 89 6e-20
ref|XP_775279.1| hypothetical protein CNBE2970 [Cryptococcus neo... 89 6e-20
>ref|XP_003384917.1| PREDICTED: protein RIC1 homolog [Amphimedon queenslandica]
Length = 2244
Score = 122 bits (307), Expect = 2e-25
Identities = 81/207 (39%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Frame = +2
Query: 1100 PARLYVGDGYIWSATG-----VQQGDPLGPLLFALVLHPLILWIQSSCQ-LLLQAWYLDD 1261
P LYV D Y + VQQGDPLGPL F+++LHP+I +Q LLL AWYLDD
Sbjct: 11 PEILYVDDVYPSNVCKLPPQRVQQGDPLGPLAFSILLHPIIERVQREVPGLLLNAWYLDD 70
Query: 1262 GTLVGDTEQVATALGMIQE-GPSYGLVLNVAKTEIFWPS-LDPRRSTPGLFPSDLSHPQQ 1435
G L G + +AL +I++ GP GL LN +K+ +F PS +D +S+ PSD+
Sbjct: 71 GILTGPPADLLSALNIIEDMGPPCGLHLNHSKSLLFLPSGVDSSQSS---LPSDIPVTSL 127
Query: 1436 GVRLLGGAVSTDASFVMGLVRKRIDKAMTLMDCLAVLEDPQCELALLRACVGLSKLVFTI 1615
G LLG + F + KR+DKA + L++LED Q E +LLR+C+ L K+ +
Sbjct: 128 GFVLLGSPIGPP-EFCCESISKRLDKAKESVKLLSLLEDSQFEYSLLRSCLSLQKISCAL 186
Query: 1616 RTCPPSFFREAAQTFDRHLRSVLQGIV 1696
RT P Q FD + + +V
Sbjct: 187 RTTTPDILVSVIQDFDNFMFHCISDLV 213
>gb|ACA50099.1| reverse transcriptase-like protein [Ectropis obliqua]
Length = 646
Score = 101 bits (252), Expect(2) = 4e-22
Identities = 63/180 (35%), Positives = 91/180 (50%)
Frame = +2
Query: 827 LVSKIAMRGVSRDVVGYLQDFQYGVGVSGGAEAILHAVNRMVYANSDNSSLSMLLVDFQN 1006
L +K+ R + Q Q G G GG EA +H+V ++ N +L VD +N
Sbjct: 41 LAAKVGCRKKVALLSSLFQPIQLGFGSRGGCEAAVHSVRTFLHQNCGEV---LLKVDVKN 97
Query: 1007 AFNMVDRTIMLKEVRIRCPAIAPWVEYLYCQPARLYVGDGYIWSATGVQQGDPLGPLLFA 1186
AFN VDR +L +V+ + P + ++ Y +P +L + ++ S+ G QQGDP GP FA
Sbjct: 98 AFNSVDRGALLAQVKDKIPDLYNFLWQCYGEPTKLTYQNNHMLSSVGCQQGDPFGPATFA 157
Query: 1187 LVLHPLILWIQSSCQLLLQAWYLDDGTLVGDTEQVATALGMIQEGPSYGLVLNVAKTEIF 1366
L +HP+I +QS L WYLDDGTL ++ L P GL L+ E F
Sbjct: 158 LAIHPIIQRLQSK----LNVWYLDDGTLGHARSKILQGL------PVVGLSLHGESCEFF 207
Score = 31.2 bits (69), Expect(2) = 4e-22
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 720 LQGRCPQPLAEFIASAPLTPLLKPDNSIRPIAVGMVW 830
L GR + E + A L L K D IRPIAVG +
Sbjct: 2 LSGRVSSDIVEVLYGANLCALSKKDGGIRPIAVGTTY 38
>gb|AFI41156.1| reverse transcriptase [Magnaporthe oryzae]
gi|385137408|gb|AFI41157.1| reverse transcriptase
[Magnaporthe oryzae] gi|385137410|gb|AFI41158.1| reverse
transcriptase [Magnaporthe oryzae]
Length = 1070
Score = 80.5 bits (197), Expect(2) = 9e-21
Identities = 58/180 (32%), Positives = 84/180 (46%), Gaps = 3/180 (1%)
Frame = +2
Query: 827 LVSKIAMRGVSRDV--VGYLQDFQYGVGVSGGAEAILHAVNRMVYANSDNSSLSMLLVDF 1000
L+ KIA + + + L +Q GV GG E + + + + N S+ +D
Sbjct: 448 LLYKIAFKAILNTLWSPNCLLPYQLGVNSIGGVEPAIFTLEEAIMGPNINGIKSITSLDL 507
Query: 1001 QNAFNMVDRTIMLKEVRIRCPAIAPWVEYLYCQPARLYVGDGYIW-SATGVQQGDPLGPL 1177
+NAFN V R + V P + Y QP+ L +G + SA G++QGDPLGPL
Sbjct: 508 KNAFNSVSRAAIASSVAKYAPTFYRSTCWAYNQPSILITENGSVLASAQGIRQGDPLGPL 567
Query: 1178 LFALVLHPLILWIQSSCQLLLQAWYLDDGTLVGDTEQVATALGMIQEGPSYGLVLNVAKT 1357
LF+L P + IQ S A YLDD ++ T +I++ P LN AKT
Sbjct: 568 LFSLAFRPTLETIQKSLPYTYIAAYLDDVYILSKTPVKDKIAKIIEKSP---FTLNSAKT 624
Score = 47.8 bits (112), Expect(2) = 9e-21
Identities = 41/149 (27%), Positives = 66/149 (44%)
Frame = +3
Query: 375 NVRRCLQKVADGHFTAAVKVLSSSGVAPNSAETIQALEEKHXXXXXXXXXXXXFAEPPLF 554
N ++ L+K G AA ++ + VAP + E++ L EKH
Sbjct: 305 NAKKLLEKGYIGR--AAKAIIDPTPVAPETPESLNILREKHPIGQNNPFNTKSQPISGRQ 362
Query: 555 VERNTLLSCIRSFPKGTSCGRDGLRAQHLLDAMSGAAVAISSDLLDALTPVVNLWLQGRC 734
+ +L I S + + G G + LLDA + +D++ AL + ++ QG
Sbjct: 363 ITEKAILLAISSIGREKAPGLSGW-TRSLLDA--AIKIPTQNDVIPALRLLTDMIRQGTA 419
Query: 735 PQPLAEFIASAPLTPLLKPDNSIRPIAVG 821
P E + ++ L L KPD +RPIAVG
Sbjct: 420 PG--RELLCASRLIGLSKPDGGVRPIAVG 446
>ref|XP_571046.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57227280|gb|AAW43739.1| conserved hypothetical protein
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1059
Score = 89.4 bits (220), Expect(2) = 6e-20
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Frame = +2
Query: 875 YLQDFQYGVGVSGGAEAILHAVNRMVYANSDNSSLSMLLVDFQNAFNMVDRTIMLKEVRI 1054
+L FQ GV GG E I+ R++ ++ + +D NAFN VDR M V+
Sbjct: 481 FLLPFQLGVKSIGGVEPIVRLTERVLEGSAGAEFSFLASLDASNAFNRVDRAEMAAAVKT 540
Query: 1055 RCPAIAPWVEYLYCQPARLYVGDGYIWSATGVQQGDPLGPLLFALVLHPLILWIQSSCQL 1234
P + ++ Y + L GD + S+ GV+QGDP GPL F++ L P + + S
Sbjct: 541 HAPTLWRTCKWAYGDSSDLVCGDKILQSSQGVRQGDPFGPLFFSITLRPTLNALSQSLGP 600
Query: 1235 LLQAW-YLDDGTLVGDTEQVATALGMIQEGPSYGLVLNVAKTEIFWPSLDPRRSTPGLFP 1411
QA YLDD L + QV + + + LN K ++ S D R
Sbjct: 601 STQALAYLDDIYLFSNDSQVLSKTTQFLADKQHIIKLNEKKCKLI--SFDEIR------- 651
Query: 1412 SDLSHPQQGVRLLG---GAVSTDASFVMGLVRKRIDKAMTLMDCLAVLEDPQCELALLRA 1582
Q+G ++LG G A F+ G +RK + K L D Q L LLR
Sbjct: 652 ------QEGFKMLGTMVGGKEKRAEFLEGRIRKEMAKVGKLKDL-----PHQHALLLLRF 700
Query: 1583 CV 1588
C+
Sbjct: 701 CI 702
Score = 36.2 bits (82), Expect(2) = 6e-20
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
Frame = +3
Query: 360 SVSTQNVRRCLQKVADGHFTAAVKVLSS-SGVAPNSAETIQALEEKHXXXXXXXXXXXXF 536
++ ++ ++ V +G AA +VL + VA I L KH
Sbjct: 315 NIRPDTTKQVIKLVENGRLGAAERVLEEDASVAELDQGVIDQLIAKHPKGPSCPFGNAVG 374
Query: 537 AEPPLFVERNTLLSCIRSFPKGTSCGRDGLRAQHLLDAMSGAAVAISSDLLDALTPVVNL 716
P + +T+ + SF T+ G G L A V LL A + N
Sbjct: 375 PTPGKAPDIDTIQKALDSFKPDTAPGVSGWSVPLLKTAAKREPVKQFLQLLCAA--IANN 432
Query: 717 WLQGRCPQPLAEFIASAPLTPLLKPDNSIRPIAVG 821
GR + ++ L PL K D SIRPIAVG
Sbjct: 433 TAPGR------SMLRTSRLIPLKKDDGSIRPIAVG 461
>ref|XP_775279.1| hypothetical protein CNBE2970 [Cryptococcus neoformans var.
neoformans B-3501A] gi|50257935|gb|EAL20632.1|
hypothetical protein CNBE2970 [Cryptococcus neoformans
var. neoformans B-3501A]
Length = 1059
Score = 89.4 bits (220), Expect(2) = 6e-20
Identities = 73/242 (30%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Frame = +2
Query: 875 YLQDFQYGVGVSGGAEAILHAVNRMVYANSDNSSLSMLLVDFQNAFNMVDRTIMLKEVRI 1054
+L FQ GV GG E I+ R++ ++ + +D NAFN VDR M V+
Sbjct: 481 FLLPFQLGVKSIGGVEPIVRLTERVLEGSAGAEFSFLASLDASNAFNRVDRAEMAAAVKT 540
Query: 1055 RCPAIAPWVEYLYCQPARLYVGDGYIWSATGVQQGDPLGPLLFALVLHPLILWIQSSCQL 1234
P + ++ Y + L GD + S+ GV+QGDP GPL F++ L P + + S
Sbjct: 541 HAPTLWRTCKWAYGDSSDLVCGDKILQSSQGVRQGDPFGPLFFSITLRPTLNALSQSLGP 600
Query: 1235 LLQAW-YLDDGTLVGDTEQVATALGMIQEGPSYGLVLNVAKTEIFWPSLDPRRSTPGLFP 1411
QA YLDD L + QV + + + LN K ++ S D R
Sbjct: 601 STQALAYLDDIYLFSNDSQVLSKTTQFLADKQHIIKLNEKKCKLI--SFDEIR------- 651
Query: 1412 SDLSHPQQGVRLLG---GAVSTDASFVMGLVRKRIDKAMTLMDCLAVLEDPQCELALLRA 1582
Q+G ++LG G A F+ G +RK + K L D Q L LLR
Sbjct: 652 ------QEGFKMLGTMVGGKEKRAEFLEGRIRKEMAKVGKLKDL-----PHQHALLLLRF 700
Query: 1583 CV 1588
C+
Sbjct: 701 CI 702
Score = 36.2 bits (82), Expect(2) = 6e-20
Identities = 41/155 (26%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
Frame = +3
Query: 360 SVSTQNVRRCLQKVADGHFTAAVKVLSS-SGVAPNSAETIQALEEKHXXXXXXXXXXXXF 536
++ ++ ++ V +G AA +VL + VA I L KH
Sbjct: 315 NIRPDTTKQVIKLVENGRLGAAERVLEEDASVAELDQGVIDQLIAKHPKGPSCPFGNAVG 374
Query: 537 AEPPLFVERNTLLSCIRSFPKGTSCGRDGLRAQHLLDAMSGAAVAISSDLLDALTPVVNL 716
P + +T+ + SF T+ G G L A V LL A + N
Sbjct: 375 PTPGKAPDIDTIQKALDSFKPDTAPGVSGWSVPLLKTAAKREPVKQFLQLLCAA--IANN 432
Query: 717 WLQGRCPQPLAEFIASAPLTPLLKPDNSIRPIAVG 821
GR + ++ L PL K D SIRPIAVG
Sbjct: 433 TAPGR------SMLRTSRLIPLKKDDGSIRPIAVG 461