BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009942
         (2262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi...   622   e-175
ref|XP_002526471.1| pentatricopeptide repeat-containing protein,...   621   e-175
ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2...   595   e-167
ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2...   582   e-163
emb|CBI16683.3| unnamed protein product [Vitis vinifera]              566   e-158

>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
            [Vitis vinifera]
          Length = 527

 Score =  622 bits (1604), Expect = e-175
 Identities = 310/532 (58%), Positives = 396/532 (74%), Gaps = 4/532 (0%)
 Frame = -3

Query: 2155 HRPISSTSSYSKPIPWFNPTSIQNPHNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976
            H+ +S   S++ P         ++ + + HSI+C I               E +PL KW 
Sbjct: 12   HQQLSGFPSFTLP---------RSVNYRKHSITCSISQIHSYGTVDY----ERRPLVKWN 58

Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796
             VY+RISL+ENP++GSA VL+Q++ EGK L++WELCRVVKELRKF+RFK+ALEVYEWMN 
Sbjct: 59   AVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNN 118

Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616
            R +RF LSSSDAAIQLDLI+KV GV+S+E+YFS LP TLKDKR +G+LLNAYV+A+M++K
Sbjct: 119  RGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDK 178

Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436
            AE L+E ++NKGYA  PLP+NVMMTLYM  K+ DK  SM++EMM+KNI  DIYSYNIW++
Sbjct: 179  AEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLS 238

Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256
            +C S   TE+ME+V E+MK++ T++PNWTT+STMATMY+ LGQ +KA+  L+ VE  IT 
Sbjct: 239  SCES---TERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITN 295

Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076
            R+R+P+HYL+SLYGS G K EVYR WN YKS FP IPNLGYH++I SLVR+ D+EGA KI
Sbjct: 296  RDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKI 355

Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896
            YEEWL  +S+YDPRI NL+LG YVK+G LEKA  FLD ++E GGK N+ TWE+LAEG+  
Sbjct: 356  YEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTG 415

Query: 895  EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716
             K I +ALSC K+A LAEG  GW+PKP  VS FL LCE  +D A+KE  M LL+Q+GCLE
Sbjct: 416  VKKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLE 475

Query: 715  DEAYMLLVNSNGKADFGLDVSVDKD----GFDSDNDEDSGADMLLNQLEGSL 572
            DE Y  L   +  +  G ++S +KD      D D DED GA+MLLNQ +  L
Sbjct: 476  DEPYASLFGLHTGSVTGNELSNEKDRTGADKDIDEDEDDGAEMLLNQFQSGL 527


>ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534146|gb|EEF35862.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  621 bits (1602), Expect = e-175
 Identities = 303/530 (57%), Positives = 397/530 (74%), Gaps = 2/530 (0%)
 Frame = -3

Query: 2158 QHRPISSTSSYSKPIPWFNP--TSIQNPHNKNHSISCWIPXXXXXXXXXXXXXYESKPLH 1985
            Q   +SST SYS+P+PW NP  T  Q  + +   I+C I               E +P+ 
Sbjct: 11   QQASLSSTISYSRPLPWKNPHYTLHQTVNYRKLPITCSISKVHSYGTVDY----ERRPMI 66

Query: 1984 KWTGVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEW 1805
            KW  VY+RISL+E P++G+A VL++ +K+GK L++WELCRVVKELRK++R K ALEVY+W
Sbjct: 67   KWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDW 126

Query: 1804 MNEREDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARM 1625
            MN RE+RF LS+SDAAIQLDL++KVRGV+S+E+YF  L   +KD+R +G+LLN+YV+ARM
Sbjct: 127  MNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARM 186

Query: 1624 KEKAEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNI 1445
            +EKAE+L+E ++ K Y  H LP+NVMMTLYM  K+YDK   M++EMM KNI  DIYSYNI
Sbjct: 187  REKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNI 246

Query: 1444 WITACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGS 1265
            W+++ GS GS E+MEEV E+MK+DST++PNWTT+STMATMY+ +GQL+KA+  LR VE  
Sbjct: 247  WLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESR 306

Query: 1264 ITGRERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGA 1085
            ITGR+RIP+HYLLSLYG++G KEE+YR+WN YKS F TIPNLGYH++I SLVR+DDIEGA
Sbjct: 307  ITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGA 366

Query: 1084 VKIYEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEG 905
             KIYEEWLP +S+YDPRI NL++GWYV+ G L+KA  F D ++EVGGK N+ TWE+LA+G
Sbjct: 367  EKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADG 426

Query: 904  HINEKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLG 725
            H  EK I EALSC K+A LA+G K W+PKP  +S F  LCE  +D AS  V  DLL Q G
Sbjct: 427  HTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDLLAQSG 486

Query: 724  CLEDEAYMLLVNSNGKADFGLDVSVDKDGFDSDNDEDSGADMLLNQLEGS 575
             LED+ Y  L+ S+  ++   ++S +KD    D +E    +  LNQL+G+
Sbjct: 487  YLEDKTYASLIGSSVPSN---ELSTEKDR-TGDRNEVEENETFLNQLQGN 532


>ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  595 bits (1535), Expect = e-167
 Identities = 290/533 (54%), Positives = 393/533 (73%), Gaps = 8/533 (1%)
 Frame = -3

Query: 2146 ISSTSSYSKPIPWFNPTSIQNP---HNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976
            +SS+ SYS  +PW +P S  +    H K   I C I               E +P+ KW 
Sbjct: 14   LSSSISYSHSVPWKSPKSTLHQTVNHKKLPVIICSISQVHNYGTVDY----ERRPMIKWN 69

Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796
            G+Y+RISL+ENP++GS  VL++++ EGK L++WELCRVVKELRK++R++ ALEVY+WM  
Sbjct: 70   GIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKN 129

Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616
            R++RF LS SDAAIQLDLI+KVRGV+++E++F +LP T KD+R +G+LLNAYV+ RM+EK
Sbjct: 130  RQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREK 189

Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436
            AE L +++++KGY  H LP+NV MTLYM  K+YDK   M++EM +KNI  DIYSYNIW++
Sbjct: 190  AETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLS 249

Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256
            +CGS GS +KME+V E+MK D +++PNWTT+STMATMY+ +GQ +KA+  LR VE  ITG
Sbjct: 250  SCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRITG 309

Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076
            R+RIP+HYLLSLYG++G KEEVYR+WN YKS FP+IPNLGYH++I SLVRLDDIEGA KI
Sbjct: 310  RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKI 369

Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896
            YEEWL  +++YDPRI NL +  YV +G L++A  F D +LE GGK N+ TWE+LA+GHI+
Sbjct: 370  YEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHIS 429

Query: 895  EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716
            E+   EALSC+K+A +  G K W+P P  V+ F  LCE  +D A+KE     L+Q G L+
Sbjct: 430  ERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLK 489

Query: 715  DEAYMLLVNSNGKADFGLDVSVDKDGF-----DSDNDEDSGADMLLNQLEGSL 572
            D+AY  L+   G    G ++S  +DG      + ++DED GA+ML++ L+GSL
Sbjct: 490  DKAYASLL---GMPVTGDELSTKEDGTGDQIDNEEDDEDDGAEMLVSHLQGSL 539


>ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  582 bits (1501), Expect = e-163
 Identities = 276/488 (56%), Positives = 366/488 (75%), Gaps = 3/488 (0%)
 Frame = -3

Query: 2146 ISSTSSYSKPIPWFNPTSIQNP---HNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976
            +SST SYS P+PW NP    +    + K   I+C I               E +P+ KW 
Sbjct: 14   LSSTISYSHPLPWKNPNFTLHQTVNYKKLPVITCSISQIHNYGTVDY----ERRPMMKWN 69

Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796
             +Y+RISL+ENP++GS  VL+Q++ +GK L++WELCRVVKELRK++R++ ALEVY+WMN 
Sbjct: 70   AIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNN 129

Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616
            R++RF LS SDAAIQLDLI+KVRGV+S+E++F  LP T KD+R +G+LLNAYVR RM+EK
Sbjct: 130  RQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREK 189

Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436
            AE+L+++++ K Y  H LPYNVMMTLYM   +YDK   +++EM +KNI  DIYSYNIW++
Sbjct: 190  AESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLS 249

Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256
            +CG  GS +KME+V E+MK D +++PNWTT+STMATMY+ +G+ +KA+  LR VE  ITG
Sbjct: 250  SCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRITG 309

Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076
            R+RIP+HYLLSLYG++G KEEVYR+WN YKS FP+IPNLGYH+MI SLVR+DDIEGA KI
Sbjct: 310  RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKI 369

Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896
            YEEWL  +++YDPRI NL +  +V +G L+KA  F D +LE GGK N+++WE+LA+GHI+
Sbjct: 370  YEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHIS 429

Query: 895  EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716
            E+   EALSC+K+A    G K W+P P  VS F  LCE   D ASKE     L+Q G L+
Sbjct: 430  ERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHLK 489

Query: 715  DEAYMLLV 692
            D+AY LL+
Sbjct: 490  DKAYALLL 497


>emb|CBI16683.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  566 bits (1458), Expect = e-158
 Identities = 271/419 (64%), Positives = 340/419 (81%)
 Frame = -3

Query: 1951 LENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNEREDRFALS 1772
            +ENP++GSA VL+Q++ EGK L++WELCRVVKELRKF+RFK+ALEVYEWMN R +RF LS
Sbjct: 1    MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 60

Query: 1771 SSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEKAEALVEDI 1592
            SSDAAIQLDLI+KV GV+S+E+YFS LP TLKDKR +G+LLNAYV+A+M++KAE L+E +
Sbjct: 61   SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 120

Query: 1591 KNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWITACGSMGST 1412
            +NKGYA  PLP+NVMMTLYM  K+ DK  SM++EMM+KNI  DIYSYNIW+++C S   T
Sbjct: 121  RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCES---T 177

Query: 1411 EKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITGRERIPFHY 1232
            E+ME+V E+MK++ T++PNWTT+STMATMY+ LGQ +KA+  L+ VE  IT R+R+P+HY
Sbjct: 178  ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHY 237

Query: 1231 LLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKIYEEWLPHR 1052
            L+SLYGS G K EVYR WN YKS FP IPNLGYH++I SLVR+ D+EGA KIYEEWL  +
Sbjct: 238  LISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVK 297

Query: 1051 STYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHINEKHIYEAL 872
            S+YDPRI NL+LG YVK+G LEKA  FLD ++E GGK N+ TWE+LAEG+   K I +AL
Sbjct: 298  SSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDAL 357

Query: 871  SCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLEDEAYMLL 695
            SC K+A LAEG  GW+PKP  VS FL LCE  +D A+KE  M LL+Q+G  +D A MLL
Sbjct: 358  SCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEMLL 416