BLASTX nr result
ID: Coptis24_contig00009942
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009942 (2262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi... 622 e-175 ref|XP_002526471.1| pentatricopeptide repeat-containing protein,... 621 e-175 ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2... 595 e-167 ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2... 582 e-163 emb|CBI16683.3| unnamed protein product [Vitis vinifera] 566 e-158 >ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Vitis vinifera] Length = 527 Score = 622 bits (1604), Expect = e-175 Identities = 310/532 (58%), Positives = 396/532 (74%), Gaps = 4/532 (0%) Frame = -3 Query: 2155 HRPISSTSSYSKPIPWFNPTSIQNPHNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976 H+ +S S++ P ++ + + HSI+C I E +PL KW Sbjct: 12 HQQLSGFPSFTLP---------RSVNYRKHSITCSISQIHSYGTVDY----ERRPLVKWN 58 Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796 VY+RISL+ENP++GSA VL+Q++ EGK L++WELCRVVKELRKF+RFK+ALEVYEWMN Sbjct: 59 AVYRRISLMENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNN 118 Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616 R +RF LSSSDAAIQLDLI+KV GV+S+E+YFS LP TLKDKR +G+LLNAYV+A+M++K Sbjct: 119 RGERFRLSSSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDK 178 Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436 AE L+E ++NKGYA PLP+NVMMTLYM K+ DK SM++EMM+KNI DIYSYNIW++ Sbjct: 179 AEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLS 238 Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256 +C S TE+ME+V E+MK++ T++PNWTT+STMATMY+ LGQ +KA+ L+ VE IT Sbjct: 239 SCES---TERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITN 295 Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076 R+R+P+HYL+SLYGS G K EVYR WN YKS FP IPNLGYH++I SLVR+ D+EGA KI Sbjct: 296 RDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKI 355 Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896 YEEWL +S+YDPRI NL+LG YVK+G LEKA FLD ++E GGK N+ TWE+LAEG+ Sbjct: 356 YEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTG 415 Query: 895 EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716 K I +ALSC K+A LAEG GW+PKP VS FL LCE +D A+KE M LL+Q+GCLE Sbjct: 416 VKKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLE 475 Query: 715 DEAYMLLVNSNGKADFGLDVSVDKD----GFDSDNDEDSGADMLLNQLEGSL 572 DE Y L + + G ++S +KD D D DED GA+MLLNQ + L Sbjct: 476 DEPYASLFGLHTGSVTGNELSNEKDRTGADKDIDEDEDDGAEMLLNQFQSGL 527 >ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 533 Score = 621 bits (1602), Expect = e-175 Identities = 303/530 (57%), Positives = 397/530 (74%), Gaps = 2/530 (0%) Frame = -3 Query: 2158 QHRPISSTSSYSKPIPWFNP--TSIQNPHNKNHSISCWIPXXXXXXXXXXXXXYESKPLH 1985 Q +SST SYS+P+PW NP T Q + + I+C I E +P+ Sbjct: 11 QQASLSSTISYSRPLPWKNPHYTLHQTVNYRKLPITCSISKVHSYGTVDY----ERRPMI 66 Query: 1984 KWTGVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEW 1805 KW VY+RISL+E P++G+A VL++ +K+GK L++WELCRVVKELRK++R K ALEVY+W Sbjct: 67 KWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDW 126 Query: 1804 MNEREDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARM 1625 MN RE+RF LS+SDAAIQLDL++KVRGV+S+E+YF L +KD+R +G+LLN+YV+ARM Sbjct: 127 MNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARM 186 Query: 1624 KEKAEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNI 1445 +EKAE+L+E ++ K Y H LP+NVMMTLYM K+YDK M++EMM KNI DIYSYNI Sbjct: 187 REKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNI 246 Query: 1444 WITACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGS 1265 W+++ GS GS E+MEEV E+MK+DST++PNWTT+STMATMY+ +GQL+KA+ LR VE Sbjct: 247 WLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESR 306 Query: 1264 ITGRERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGA 1085 ITGR+RIP+HYLLSLYG++G KEE+YR+WN YKS F TIPNLGYH++I SLVR+DDIEGA Sbjct: 307 ITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEGA 366 Query: 1084 VKIYEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEG 905 KIYEEWLP +S+YDPRI NL++GWYV+ G L+KA F D ++EVGGK N+ TWE+LA+G Sbjct: 367 EKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADG 426 Query: 904 HINEKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLG 725 H EK I EALSC K+A LA+G K W+PKP +S F LCE +D AS V DLL Q G Sbjct: 427 HTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDLLAQSG 486 Query: 724 CLEDEAYMLLVNSNGKADFGLDVSVDKDGFDSDNDEDSGADMLLNQLEGS 575 LED+ Y L+ S+ ++ ++S +KD D +E + LNQL+G+ Sbjct: 487 YLEDKTYASLIGSSVPSN---ELSTEKDR-TGDRNEVEENETFLNQLQGN 532 >ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa] Length = 539 Score = 595 bits (1535), Expect = e-167 Identities = 290/533 (54%), Positives = 393/533 (73%), Gaps = 8/533 (1%) Frame = -3 Query: 2146 ISSTSSYSKPIPWFNPTSIQNP---HNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976 +SS+ SYS +PW +P S + H K I C I E +P+ KW Sbjct: 14 LSSSISYSHSVPWKSPKSTLHQTVNHKKLPVIICSISQVHNYGTVDY----ERRPMIKWN 69 Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796 G+Y+RISL+ENP++GS VL++++ EGK L++WELCRVVKELRK++R++ ALEVY+WM Sbjct: 70 GIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKN 129 Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616 R++RF LS SDAAIQLDLI+KVRGV+++E++F +LP T KD+R +G+LLNAYV+ RM+EK Sbjct: 130 RQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREK 189 Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436 AE L +++++KGY H LP+NV MTLYM K+YDK M++EM +KNI DIYSYNIW++ Sbjct: 190 AETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLS 249 Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256 +CGS GS +KME+V E+MK D +++PNWTT+STMATMY+ +GQ +KA+ LR VE ITG Sbjct: 250 SCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRITG 309 Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076 R+RIP+HYLLSLYG++G KEEVYR+WN YKS FP+IPNLGYH++I SLVRLDDIEGA KI Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEGAEKI 369 Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896 YEEWL +++YDPRI NL + YV +G L++A F D +LE GGK N+ TWE+LA+GHI+ Sbjct: 370 YEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHIS 429 Query: 895 EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716 E+ EALSC+K+A + G K W+P P V+ F LCE +D A+KE L+Q G L+ Sbjct: 430 ERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLK 489 Query: 715 DEAYMLLVNSNGKADFGLDVSVDKDGF-----DSDNDEDSGADMLLNQLEGSL 572 D+AY L+ G G ++S +DG + ++DED GA+ML++ L+GSL Sbjct: 490 DKAYASLL---GMPVTGDELSTKEDGTGDQIDNEEDDEDDGAEMLVSHLQGSL 539 >ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa] Length = 497 Score = 582 bits (1501), Expect = e-163 Identities = 276/488 (56%), Positives = 366/488 (75%), Gaps = 3/488 (0%) Frame = -3 Query: 2146 ISSTSSYSKPIPWFNPTSIQNP---HNKNHSISCWIPXXXXXXXXXXXXXYESKPLHKWT 1976 +SST SYS P+PW NP + + K I+C I E +P+ KW Sbjct: 14 LSSTISYSHPLPWKNPNFTLHQTVNYKKLPVITCSISQIHNYGTVDY----ERRPMMKWN 69 Query: 1975 GVYKRISLLENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNE 1796 +Y+RISL+ENP++GS VL+Q++ +GK L++WELCRVVKELRK++R++ ALEVY+WMN Sbjct: 70 AIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNN 129 Query: 1795 REDRFALSSSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEK 1616 R++RF LS SDAAIQLDLI+KVRGV+S+E++F LP T KD+R +G+LLNAYVR RM+EK Sbjct: 130 RQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREK 189 Query: 1615 AEALVEDIKNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWIT 1436 AE+L+++++ K Y H LPYNVMMTLYM +YDK +++EM +KNI DIYSYNIW++ Sbjct: 190 AESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLS 249 Query: 1435 ACGSMGSTEKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITG 1256 +CG GS +KME+V E+MK D +++PNWTT+STMATMY+ +G+ +KA+ LR VE ITG Sbjct: 250 SCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRITG 309 Query: 1255 RERIPFHYLLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKI 1076 R+RIP+HYLLSLYG++G KEEVYR+WN YKS FP+IPNLGYH+MI SLVR+DDIEGA KI Sbjct: 310 RDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEGAEKI 369 Query: 1075 YEEWLPHRSTYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHIN 896 YEEWL +++YDPRI NL + +V +G L+KA F D +LE GGK N+++WE+LA+GHI+ Sbjct: 370 YEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHIS 429 Query: 895 EKHIYEALSCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLE 716 E+ EALSC+K+A G K W+P P VS F LCE D ASKE L+Q G L+ Sbjct: 430 ERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHLK 489 Query: 715 DEAYMLLV 692 D+AY LL+ Sbjct: 490 DKAYALLL 497 >emb|CBI16683.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 566 bits (1458), Expect = e-158 Identities = 271/419 (64%), Positives = 340/419 (81%) Frame = -3 Query: 1951 LENPDVGSAFVLDQFDKEGKSLSRWELCRVVKELRKFRRFKLALEVYEWMNEREDRFALS 1772 +ENP++GSA VL+Q++ EGK L++WELCRVVKELRKF+RFK+ALEVYEWMN R +RF LS Sbjct: 1 MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 60 Query: 1771 SSDAAIQLDLISKVRGVASSEEYFSNLPGTLKDKRTHGSLLNAYVRARMKEKAEALVEDI 1592 SSDAAIQLDLI+KV GV+S+E+YFS LP TLKDKR +G+LLNAYV+A+M++KAE L+E + Sbjct: 61 SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 120 Query: 1591 KNKGYALHPLPYNVMMTLYMKHKDYDKAISMVTEMMDKNISPDIYSYNIWITACGSMGST 1412 +NKGYA PLP+NVMMTLYM K+ DK SM++EMM+KNI DIYSYNIW+++C S T Sbjct: 121 RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSCES---T 177 Query: 1411 EKMEEVLERMKMDSTVSPNWTTYSTMATMYMNLGQLDKAKASLRMVEGSITGRERIPFHY 1232 E+ME+V E+MK++ T++PNWTT+STMATMY+ LGQ +KA+ L+ VE IT R+R+P+HY Sbjct: 178 ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHY 237 Query: 1231 LLSLYGSIGEKEEVYRIWNTYKSSFPTIPNLGYHSMIGSLVRLDDIEGAVKIYEEWLPHR 1052 L+SLYGS G K EVYR WN YKS FP IPNLGYH++I SLVR+ D+EGA KIYEEWL + Sbjct: 238 LISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVK 297 Query: 1051 STYDPRICNLVLGWYVKKGMLEKAGDFLDQVLEVGGKANAYTWELLAEGHINEKHIYEAL 872 S+YDPRI NL+LG YVK+G LEKA FLD ++E GGK N+ TWE+LAEG+ K I +AL Sbjct: 298 SSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDAL 357 Query: 871 SCVKKATLAEGGKGWRPKPTFVSCFLSLCEHHSDNASKEVFMDLLKQLGCLEDEAYMLL 695 SC K+A LAEG GW+PKP VS FL LCE +D A+KE M LL+Q+G +D A MLL Sbjct: 358 SCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGYEDDGAEMLL 416