BLASTX nr result

ID: Coptis24_contig00009941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009941
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273972.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   255   1e-65
gb|AEK98590.1| domain rearranged methyltransferase [Vitis amuren...   255   1e-65
gb|AEC12442.1| DNA (cytosine-5)-methyltransferase DRM1/2 [Gossyp...   216   7e-54
gb|AFV99134.1| DRM-type cytosine DNA-methyltransferase 2 [Malus ...   214   4e-53
ref|XP_004141100.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   210   5e-52

>ref|XP_002273972.2| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Vitis
           vinifera]
          Length = 616

 Score =  255 bits (652), Expect = 1e-65
 Identities = 154/302 (50%), Positives = 194/302 (64%), Gaps = 18/302 (5%)
 Frame = -1

Query: 854 GNL-GEESDRLPWDSDEEEEIR-LRSSSFLNSIIPLGPAVADPGEASSSAGPSCSKLVSE 681
           GN+ GEESD + W++D+E E + L  SS    IIP G A    GEASSS GPS SKL++ 
Sbjct: 17  GNISGEESDSIDWNTDDELETQNLPPSSSSTLIIPGGEASIASGEASSSTGPSNSKLINH 76

Query: 680 FVVMGFSRDMVTKAIQENGEGNAEAILETLLTYSALNQ-------SPAQRKXXXXXXXXX 522
           F+ MGFS  MV KAI+++GEGN ++ILE LLTYSAL         SP             
Sbjct: 77  FMGMGFSEKMVVKAIEQDGEGNTDSILEYLLTYSALENCPQELENSPQAEPQVVSDNCSS 136

Query: 521 XSTKDIHDELSDMESDLGNEENMDPLVEKENTLKQLVDMGYPMAEASIAMDRCGPDASVS 342
              +   D+ SD +S   N+EN++ L +KE  L  L DMGY + EASIAMDRCGPD+SV 
Sbjct: 137 DYDESFLDDFSDTDSCHENQENINSLSDKEKKLLFLADMGYTVEEASIAMDRCGPDSSVV 196

Query: 341 VLIDFISAAQMAKAADAYIARPTYPSSNGDEIRRSHISLSQNK-KRRTF--------KEE 189
            L DFISAAQ++KAADA +       S+ ++ R  H+    NK K+R F        K++
Sbjct: 197 ELTDFISAAQISKAADADLGE----LSDEEKPRPKHLYKDYNKQKKRKFLDYRLWERKKQ 252

Query: 188 GRPEKKLWGRSDDGETVCLPNPMIGFGLPSEPRPIFRRTLPEAAVGPPYFYYENVALAPK 9
              EKKL  R++D E + LPNPM+GFG+P+EP P+F RTLPEAAVGPPYFYYENVALAPK
Sbjct: 253 RGYEKKL--RNEDDEPIRLPNPMVGFGVPAEPCPVFHRTLPEAAVGPPYFYYENVALAPK 310

Query: 8   GV 3
           GV
Sbjct: 311 GV 312


>gb|AEK98590.1| domain rearranged methyltransferase [Vitis amurensis]
          Length = 603

 Score =  255 bits (652), Expect = 1e-65
 Identities = 153/302 (50%), Positives = 194/302 (64%), Gaps = 18/302 (5%)
 Frame = -1

Query: 854 GNL-GEESDRLPWDSDEEEEIR-LRSSSFLNSIIPLGPAVADPGEASSSAGPSCSKLVSE 681
           GN+ GEESD + W++D+E E + L  SS    IIP G A    GEASSS GPS SKL++ 
Sbjct: 4   GNISGEESDSIDWNTDDELETQNLPPSSSSTLIIPGGEASIASGEASSSTGPSNSKLINH 63

Query: 680 FVVMGFSRDMVTKAIQENGEGNAEAILETLLTYSALNQ-------SPAQRKXXXXXXXXX 522
           F+ MGFS  MV KAI+++GEGN ++ILE LLTYSAL         SP             
Sbjct: 64  FIGMGFSEKMVVKAIEQDGEGNTDSILEYLLTYSALENCPQELENSPQAEPQVVSDNCSS 123

Query: 521 XSTKDIHDELSDMESDLGNEENMDPLVEKENTLKQLVDMGYPMAEASIAMDRCGPDASVS 342
              +   D+ SD +S   N+EN++ + +KE  L  L DMGY + EASIAMDRCGPD+SV 
Sbjct: 124 DYDESFLDDFSDTDSCHENQENINSMSDKEKKLLFLADMGYTVEEASIAMDRCGPDSSVV 183

Query: 341 VLIDFISAAQMAKAADAYIARPTYPSSNGDEIRRSHISLSQNK-KRRTF--------KEE 189
            L DFISAAQ++KAADA +       S+ ++ R  H+    NK K+R F        K++
Sbjct: 184 ELTDFISAAQISKAADADLGE----LSDEEKPRPKHLYKDYNKQKKRKFLDYRLWERKKQ 239

Query: 188 GRPEKKLWGRSDDGETVCLPNPMIGFGLPSEPRPIFRRTLPEAAVGPPYFYYENVALAPK 9
              EKKL  R++D E + LPNPM+GFG+P+EP P+F RTLPEAAVGPPYFYYENVALAPK
Sbjct: 240 RGYEKKL--RNEDDEPIRLPNPMVGFGVPAEPCPVFHRTLPEAAVGPPYFYYENVALAPK 297

Query: 8   GV 3
           GV
Sbjct: 298 GV 299


>gb|AEC12442.1| DNA (cytosine-5)-methyltransferase DRM1/2 [Gossypium hirsutum]
          Length = 636

 Score =  216 bits (551), Expect = 7e-54
 Identities = 145/342 (42%), Positives = 191/342 (55%), Gaps = 10/342 (2%)
 Frame = -1

Query: 998 DANGEG--SDDFHWDSEEETP--SLPLVPAGEFHWDSDEEVPECVASTSCAVGNLGEESD 831
           D NG G  +D+F WD+E+E    +  +         + E V      +S A     +  D
Sbjct: 2   DQNGSGGDADNFDWDTEDELEIDNYAIASRSGVSLTNGEAVLGTAEVSSSADSPNSKLID 61

Query: 830 RLPWDSDEEEEIR--LRSSSFLNSIIPLGPAVADPGEASSSAGPSCSKLVSEFVVMGFSR 657
                   +E +   +  +   NS + L   +     ASS A  S SKL+  FV MGFS 
Sbjct: 62  HFVGMGFSQELVTKAIEENGEENSNLILEALLQY--SASSLASSSNSKLIDHFVGMGFSE 119

Query: 656 DMVTKAIQENGEGNAEAILETLLTYSALNQSPAQRKXXXXXXXXXXSTKDIHDELSDMES 477
           +MV KA+QENGEGN + ILETLLTYSAL +S   ++             +  D+ +D++S
Sbjct: 120 EMVLKAVQENGEGNTDTILETLLTYSALEKSAPVQQHADSDDFSSDYEGNFLDDFTDIDS 179

Query: 476 DLGNEENMDPLVEKENTLKQLVDMGYPMAEASIAMDRCGPDASVSVLIDFISAAQMAKAA 297
               EE ++P  ++E+ L  L  MGY  AEAS+AM+RCGPD+S++ L DFI AAQMAKAA
Sbjct: 180 SSDTEEIINPGSDEESKLLYLTKMGYSEAEASVAMERCGPDSSIAELTDFICAAQMAKAA 239

Query: 296 DAYIA----RPTYPSSNGDEIRRSHISLSQNKKRRTFKEEGRPEKKLWGRSDDGETVCLP 129
           DA       +P    SN ++ R     L + KK+         EKKL    DD   + LP
Sbjct: 240 DALFPVEDRKPFCNGSNYNKRRNLGYDLWKRKKQMKL------EKKLLNEVDDA--LHLP 291

Query: 128 NPMIGFGLPSEPRPIFRRTLPEAAVGPPYFYYENVALAPKGV 3
           NPMIGFG+P+EP  I +RTLPEAAVGPPYFYYENVALAPKGV
Sbjct: 292 NPMIGFGVPTEPDLITQRTLPEAAVGPPYFYYENVALAPKGV 333


>gb|AFV99134.1| DRM-type cytosine DNA-methyltransferase 2 [Malus x domestica]
          Length = 930

 Score =  214 bits (544), Expect = 4e-53
 Identities = 135/324 (41%), Positives = 179/324 (55%), Gaps = 43/324 (13%)
 Frame = -1

Query: 845  GEESDRLPWDSDEEEEIRLRSSSFLNSIIPLGPAVADPGEASSSAGPSCSKLVSEFVVMG 666
            GE+S+   W++D+E EI   + S  +S+   G A+   GE+SSSAGPS +K++  FV MG
Sbjct: 164  GEDSNDFDWNTDDELEIENFTLSTSSSLTVGGEAIVRSGESSSSAGPSNTKVLDHFVAMG 223

Query: 665  FSRDMVTKAIQEN--------------------------GEGNAEAILETLLTYSALNQS 564
            FS  MV KAIQE+                          GE N ++ILETLLTYSAL  S
Sbjct: 224  FSEKMVVKAIQEHGKSIVSFHFSKRFHTNGSITALMEYPGEENTDSILETLLTYSALESS 283

Query: 563  PAQR-----------------KXXXXXXXXXXSTKDIHDELSDMESDLGNEENMDPLVEK 435
            P ++                 +            +   D+ SD++S    EE ++P  EK
Sbjct: 284  PEEKQEVETLQEVEPQEVEPQEADSDDFSLDDYDESFLDDFSDLDSCSDTEEIINPTSEK 343

Query: 434  ENTLKQLVDMGYPMAEASIAMDRCGPDASVSVLIDFISAAQMAKAADAYIARPTYPSSNG 255
               ++ LV+MGY M EASIA++RCG D++V  L DFI AAQMA+A DA +     P S+ 
Sbjct: 344  -GKIRSLVNMGYTMEEASIAIERCGTDSTVVELTDFICAAQMARAEDALLPIEEKPGSHS 402

Query: 254  DEIRRSHISLSQNKKRRTFKEEGRPEKKLWGRSDDGETVCLPNPMIGFGLPSEPRPIFRR 75
             + R+        KK+R  +  G        + DD ETV LPNPM+GFG P++P  +  R
Sbjct: 403  YKKRKLLEYEILKKKKRQMRLCG-------NQGDDDETVHLPNPMVGFGTPTDPYVLTHR 455

Query: 74   TLPEAAVGPPYFYYENVALAPKGV 3
            TLPEAAVGPPYFYYENVALAPKGV
Sbjct: 456  TLPEAAVGPPYFYYENVALAPKGV 479


>ref|XP_004141100.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Cucumis
           sativus] gi|449515567|ref|XP_004164820.1| PREDICTED: DNA
           (cytosine-5)-methyltransferase DRM2-like [Cucumis
           sativus]
          Length = 586

 Score =  210 bits (535), Expect = 5e-52
 Identities = 129/293 (44%), Positives = 170/293 (58%), Gaps = 10/293 (3%)
 Frame = -1

Query: 851 NLGEESDRLPWDSDEEEEIRLRSSSFLNSIIPLGP--AVADPGE----ASSSAGPSCSKL 690
           + G E D + WD+++E EI           IPLG   ++A PG     ASSSAGPS SK 
Sbjct: 5   DFGVEVDNIDWDTEDELEIEN---------IPLGSHASLAFPGVEANMASSSAGPSNSKT 55

Query: 689 VSEFVVMGFSRDMVTKAIQENGEGNAEAILETLLTYSALNQSPAQRKXXXXXXXXXXSTK 510
           V  F+ MGFS  MV KAI++NGE N ++ILETLLT SAL  SP +++             
Sbjct: 56  VDYFIGMGFSAKMVAKAIEDNGEENTDSILETLLTLSALENSPPKQQHVDTDDSFSDYEG 115

Query: 509 DIHDELSDMESDLGNEENMDPLVEKENTLKQLVDMGYPMAEASIAMDRCGPDASVSVLID 330
              D+ SD++SD  NE    P+ + +N +  LVDMGY   EA  A++RCG  +S + L D
Sbjct: 116 SFLDDFSDLDSDYENEATAKPVSDADNKMTFLVDMGYSEDEAYAAIERCGVHSSFAELTD 175

Query: 329 FISAAQMAKAADAYIA----RPTYPSSNGDEIRRSHISLSQNKKRRTFKEEGRPEKKLWG 162
           FISAAQ++KAAD  +     RP   + NG            NK+R    +  + +K    
Sbjct: 176 FISAAQISKAADVLLGDLPVRPKPKNLNGCS--------KLNKRRHYDDDTWKKKKPRCF 227

Query: 161 RSDDGETVCLPNPMIGFGLPSEPRPIFRRTLPEAAVGPPYFYYENVALAPKGV 3
             +D +T+ LPNPMIGFG+P+E      R +PEAA+GPPYFYYENVALAPKGV
Sbjct: 228 EDEDDDTIRLPNPMIGFGVPNELCLTVHRKIPEAAMGPPYFYYENVALAPKGV 280


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