BLASTX nr result

ID: Coptis24_contig00009939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009939
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23432.3| unnamed protein product [Vitis vinifera]              180   9e-43
ref|XP_002270302.1| PREDICTED: uncharacterized protein LOC100249...   180   9e-43
ref|XP_002316412.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-41
ref|XP_002532917.1| conserved hypothetical protein [Ricinus comm...   167   1e-38
ref|XP_003555468.1| PREDICTED: uncharacterized protein LOC100791...   151   6e-34

>emb|CBI23432.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score =  180 bits (457), Expect = 9e-43
 Identities = 106/190 (55%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
 Frame = -3

Query: 1634 MYAVKVGWVGQTFAXXXXXXXXXXXXGGKKSRIRRSKEDRKTMVESFIKRYQNSNHGSFP 1455
            M+A+K GWVGQTFA            G +KSRIRRSKE+RK MVESFIK+YQ SN G+FP
Sbjct: 1    MHAIKGGWVGQTFALAKGNDS-----GRRKSRIRRSKEERKEMVESFIKKYQKSNDGNFP 55

Query: 1454 SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKQAEDEQGVDQLHEQYPLGSMSIDPQN 1275
            SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAK   +EQ + +L EQYPLGS+S++PQ 
Sbjct: 56   SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKLTPEEQHMVELSEQYPLGSISLEPQV 115

Query: 1274 HVSVSLNGTQFVCIDHQSISEELDGTLNGK-IGXXXQRIDRGRYVNGITVDKDYKEAHAS 1098
            H+S S+  T  V   HQ  SEEL    + K  G      D G  +NG  ++K  +E   S
Sbjct: 116  HLSSSVE-TDSVPDHHQIRSEELVLDSSRKYTGSEHHIFDNGWIINGSHMEKKNEE---S 171

Query: 1097 EDPRHVDVEI 1068
            + P + ++E+
Sbjct: 172  DMPIYAELEV 181



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 16/233 (6%)
 Frame = -2

Query: 897 IHTDVQISQNLEPKEDI---VEISPSKVTRIATDVVVETFPISKVTR-----DMDVRSTE 742
           I+ ++++++    K  +   VE++ +KVT IA DVVVETFP+   T+     D ++  + 
Sbjct: 175 IYAELEVAETSGAKNALLEEVEVTAAKVTDIAADVVVETFPLRSFTKPSYSLDGELGKSS 234

Query: 741 AMKLVENLEHH--ALEKVEVTS---KLSESGYSRPLDEKLVQHLGDQLIETLXXXXXXXX 577
            +    ++E     +++  VTS    L E   S  +DE+ V+++ D L+E+         
Sbjct: 235 VLDGKNSVEDPFGLVDEKAVTSPGGSLLEMN-SGLIDEEAVKNVADPLLESSNITSINKD 293

Query: 576 XXXXXXXSN-LEADVALIEDLRLQTIKQDLAATGMEPKSDAENVYIKN--SKSTSSNQEE 406
                     LE  ++  + L   T +Q       +       ++ +N    STSS   E
Sbjct: 294 VVHDDQDGTVLEVKISHGDCLSSDTFEQSQEIAENKNLDSPNGIHSENMTGSSTSSACSE 353

Query: 405 SLSQEAAAIKTEGDMQKPNALSTKEGKSSTLNRIKLESWEGSSRKTAEAGSNP 247
           ++S+EA  I+ + +++  +    ++G S TL+RI LESWEG+S+K+ E  +NP
Sbjct: 354 TISEEAIVIEKKPNIEDGSI--PQKGSSPTLDRINLESWEGASKKSTEPETNP 404


>ref|XP_002270302.1| PREDICTED: uncharacterized protein LOC100249674 [Vitis vinifera]
          Length = 444

 Score =  180 bits (457), Expect = 9e-43
 Identities = 106/190 (55%), Positives = 130/190 (68%), Gaps = 1/190 (0%)
 Frame = -3

Query: 1634 MYAVKVGWVGQTFAXXXXXXXXXXXXGGKKSRIRRSKEDRKTMVESFIKRYQNSNHGSFP 1455
            M+A+K GWVGQTFA            G +KSRIRRSKE+RK MVESFIK+YQ SN G+FP
Sbjct: 1    MHAIKGGWVGQTFALAKGNDS-----GRRKSRIRRSKEERKEMVESFIKKYQKSNDGNFP 55

Query: 1454 SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKQAEDEQGVDQLHEQYPLGSMSIDPQN 1275
            SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAK   +EQ + +L EQYPLGS+S++PQ 
Sbjct: 56   SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKLTPEEQHMVELSEQYPLGSISLEPQV 115

Query: 1274 HVSVSLNGTQFVCIDHQSISEELDGTLNGK-IGXXXQRIDRGRYVNGITVDKDYKEAHAS 1098
            H+S S+  T  V   HQ  SEEL    + K  G      D G  +NG  ++K  +E   S
Sbjct: 116  HLSSSVE-TDSVPDHHQIRSEELVLDSSRKYTGSEHHIFDNGWIINGSHMEKKNEE---S 171

Query: 1097 EDPRHVDVEI 1068
            + P + ++E+
Sbjct: 172  DMPIYAELEV 181



 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 37/254 (14%)
 Frame = -2

Query: 897 IHTDVQISQNLEPKEDI---VEISPSKVTRIATDVVVETFPISKVTR---DMDVRSTEAM 736
           I+ ++++++    K  +   VE++ +KVT IA DVVVETFP+   T+    +D    EA 
Sbjct: 175 IYAELEVAETSGAKNALLEEVEVTAAKVTDIAADVVVETFPLRSFTKPSYSLDGELGEAS 234

Query: 735 KLVENLEHHALEKVEV-TSKLS----------------ESGYSRP-----------LDEK 640
            +   LE    EKVE  T K S                E   + P           +DE+
Sbjct: 235 IMTGILEEKETEKVETETGKSSVLDGKNSVEDPFGLVDEKAVTSPGGSLLEMNSGLIDEE 294

Query: 639 LVQHLGDQLIETLXXXXXXXXXXXXXXXSN-LEADVALIEDLRLQTIKQDLAATGMEPKS 463
            V+++ D L+E+                   LE  ++  + L   T +Q       +   
Sbjct: 295 AVKNVADPLLESSNITSINKDVVHDDQDGTVLEVKISHGDCLSSDTFEQSQEIAENKNLD 354

Query: 462 DAENVYIKN--SKSTSSNQEESLSQEAAAIKTEGDMQKPNALSTKEGKSSTLNRIKLESW 289
               ++ +N    STSS   E++S+EA  I+ + +++  +    ++G S TL+RI LESW
Sbjct: 355 SPNGIHSENMTGSSTSSACSETISEEAIVIEKKPNIEDGSI--PQKGSSPTLDRINLESW 412

Query: 288 EGSSRKTAEAGSNP 247
           EG+S+K+ E  +NP
Sbjct: 413 EGASKKSTEPETNP 426


>ref|XP_002316412.1| predicted protein [Populus trichocarpa] gi|222865452|gb|EEF02583.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  176 bits (446), Expect = 2e-41
 Identities = 104/198 (52%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
 Frame = -3

Query: 1634 MYAVKVGWVGQTFAXXXXXXXXXXXXGGKKSRIRRSKEDRKTMVESFIKRYQNSNHGSFP 1455
            M+A+K GWVGQTFA            GGKKSRIRRSKE+RK MVESFIK+YQ+ N+G+FP
Sbjct: 1    MHAIKGGWVGQTFALAKSIDS-----GGKKSRIRRSKEERKGMVESFIKKYQSLNNGNFP 55

Query: 1454 SLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKQAEDEQGVDQLHEQYPLGSMSIDPQN 1275
            SLNLTHKEVGGSFYTVREIVREIIQENRVLGP K   +EQ  D   EQYPLG++S +PQ 
Sbjct: 56   SLNLTHKEVGGSFYTVREIVREIIQENRVLGPGKLPLEEQYNDLFVEQYPLGTISTEPQT 115

Query: 1274 HVSVSLNGTQFVCIDHQSISEELDGTLNGKIGXXXQRIDRGRYVNGITVDKDYKEAHASE 1095
             +S+S NG+      H+S  E LD           Q  + G+ +NG  V    +EA   +
Sbjct: 116  SLSISPNGSP-EHDQHESSGEALDLISEQHAEPEQQGFNNGKIINGSHVIVKNEEA---D 171

Query: 1094 DPRHVDVEII-PMDVQMR 1044
             P+ V+V++  P++ + R
Sbjct: 172  KPKVVEVQVTEPLETEKR 189


>ref|XP_002532917.1| conserved hypothetical protein [Ricinus communis]
            gi|223527310|gb|EEF29459.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 375

 Score =  167 bits (422), Expect = 1e-38
 Identities = 91/167 (54%), Positives = 116/167 (69%)
 Frame = -3

Query: 1640 AIMYAVKVGWVGQTFAXXXXXXXXXXXXGGKKSRIRRSKEDRKTMVESFIKRYQNSNHGS 1461
            +IM A+K GW GQTFA            GG+KSRIR SKE+RK MVESFIK++Q+ N+G+
Sbjct: 17   SIMRAIKGGWAGQTFALAKRNES-----GGRKSRIRISKEERKEMVESFIKKHQSLNNGN 71

Query: 1460 FPSLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKQAEDEQGVDQLHEQYPLGSMSIDP 1281
            FPSLNLTHKEVGGSFYT+REIVREIIQEN+VLGPAK   +EQ  D+L  QYPLG++S +P
Sbjct: 72   FPSLNLTHKEVGGSFYTIREIVREIIQENKVLGPAKSLPEEQNSDKLFIQYPLGTISSEP 131

Query: 1280 QNHVSVSLNGTQFVCIDHQSISEELDGTLNGKIGXXXQRIDRGRYVN 1140
            +    +S NG+ F+   H+  SEE    ++   G   Q  D G+ +N
Sbjct: 132  EASPFMSPNGSAFLSDRHEDTSEEEPYLISK--GLLHQGFDNGKIIN 176


>ref|XP_003555468.1| PREDICTED: uncharacterized protein LOC100791460 [Glycine max]
          Length = 477

 Score =  151 bits (381), Expect = 6e-34
 Identities = 90/177 (50%), Positives = 116/177 (65%)
 Frame = -3

Query: 1637 IMYAVKVGWVGQTFAXXXXXXXXXXXXGGKKSRIRRSKEDRKTMVESFIKRYQNSNHGSF 1458
            +M++VK GW GQTFA             G+K+RIRRSK++RK MVESFIK+YQ  N+G+F
Sbjct: 1    MMHSVKGGW-GQTFALAKHNESE-----GRKTRIRRSKQERKAMVESFIKKYQELNNGNF 54

Query: 1457 PSLNLTHKEVGGSFYTVREIVREIIQENRVLGPAKQAEDEQGVDQLHEQYPLGSMSIDPQ 1278
            PSLNLTHKEVGGSFYTVREIVR+IIQENRVLGPAK   +E   DQ  EQ PLGS++ DPQ
Sbjct: 55   PSLNLTHKEVGGSFYTVREIVRDIIQENRVLGPAKFTLEELNTDQFFEQNPLGSIARDPQ 114

Query: 1277 NHVSVSLNGTQFVCIDHQSISEELDGTLNGKIGXXXQRIDRGRYVNGITVDKDYKEA 1107
              ++ SL       I++    ++L  T +  I      +D+G  ++   VD   KE+
Sbjct: 115  PFLAASL-------IENHCELDKLQDTNSKMISV----VDKGDVISVGHVDVTNKES 160


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