BLASTX nr result

ID: Coptis24_contig00009934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009934
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304384.1| neutral amino acid transport protein [Populu...   274   1e-71
ref|XP_002519879.1| amino acid transporter, putative [Ricinus co...   270   2e-70
ref|XP_003631566.1| PREDICTED: uncharacterized transporter lpg16...   270   3e-70
emb|CBI37826.3| unnamed protein product [Vitis vinifera]              270   3e-70
ref|XP_002280603.1| PREDICTED: uncharacterized transporter lpg16...   270   3e-70

>ref|XP_002304384.1| neutral amino acid transport protein [Populus trichocarpa]
           gi|222841816|gb|EEE79363.1| neutral amino acid transport
           protein [Populus trichocarpa]
          Length = 473

 Score =  274 bits (701), Expect = 1e-71
 Identities = 135/176 (76%), Positives = 157/176 (89%)
 Frame = -2

Query: 739 QGASAMSNMGMFVTEMSSDSFQLLGMAERGMLPAFFSKRSRHGTPIIGILFSASGVLLLS 560
           QGA+AMSNMGMFV EMSSDSFQLLGMAERGMLP FF+KRSRHGTP+IGILFSASGV+LLS
Sbjct: 292 QGAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFAKRSRHGTPLIGILFSASGVILLS 351

Query: 559 WLSFQDIVAAENFLYCFGMILEFIAFVRLRMKYPATARPYKIPVGTVGAILMCIPPTILI 380
           WLSFQ+I+AAENFLYCFGMILEFIAFV LR+K P  +RPYKIPVGTVGAILMCIPPTILI
Sbjct: 352 WLSFQEIIAAENFLYCFGMILEFIAFVLLRIKCPVASRPYKIPVGTVGAILMCIPPTILI 411

Query: 379 GVVLALCSLKVFLVSLGAILIGLVLYPCLKQAEKRQWLRFSVNPKLQDINSNSPPR 212
            VVLAL ++KV +VSL A+ IGLV+ PCLK AEK++W++FSV+ +L D++  +  R
Sbjct: 412 CVVLALSTVKVMIVSLFAVAIGLVMQPCLKYAEKKRWMKFSVSGELPDLHEGNQER 467


>ref|XP_002519879.1| amino acid transporter, putative [Ricinus communis]
           gi|223540925|gb|EEF42483.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 486

 Score =  270 bits (691), Expect = 2e-70
 Identities = 135/173 (78%), Positives = 157/173 (90%), Gaps = 1/173 (0%)
 Frame = -2

Query: 739 QGASAMSNMGMFVTEMSSDSFQLLGMAERGMLPAFFSKRSRHGTPIIGILFSASGVLLLS 560
           QGA+AMSNMGMFV EMSSDSFQLLGMAERGMLP FF++RSR+GTP+IGILFSASGV+LLS
Sbjct: 305 QGAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFARRSRYGTPLIGILFSASGVILLS 364

Query: 559 WLSFQDIVAAENFLYCFGMILEFIAFVRLRMKYPATARPYKIPVGTVGAILMCIPPTILI 380
           WLSFQ+IVAAENFLYCFGMILEFIAFV+LR++ PA +RPYKIPVGTVGAILMCIPPTILI
Sbjct: 365 WLSFQEIVAAENFLYCFGMILEFIAFVQLRIRQPAASRPYKIPVGTVGAILMCIPPTILI 424

Query: 379 GVVLALCSLKVFLVSLGAILIGLVLYPCLKQAEKRQWLRFSVNPKLQDI-NSN 224
            VVLAL ++KV +VSL A+ IGLVL PCLK AEK++W++FS   +L D+ N+N
Sbjct: 425 CVVLALSTIKVMVVSLIAVAIGLVLQPCLKYAEKKRWMKFSAREELPDLPNAN 477


>ref|XP_003631566.1| PREDICTED: uncharacterized transporter lpg1691 isoform 2 [Vitis
           vinifera]
          Length = 483

 Score =  270 bits (689), Expect = 3e-70
 Identities = 132/171 (77%), Positives = 153/171 (89%)
 Frame = -2

Query: 739 QGASAMSNMGMFVTEMSSDSFQLLGMAERGMLPAFFSKRSRHGTPIIGILFSASGVLLLS 560
           QGASA+SNMGMFV EMSSDSFQLLGMAERGMLP FF+KRSR+GTP+ GILFSASGV+LLS
Sbjct: 302 QGASALSNMGMFVAEMSSDSFQLLGMAERGMLPDFFAKRSRYGTPLTGILFSASGVILLS 361

Query: 559 WLSFQDIVAAENFLYCFGMILEFIAFVRLRMKYPATARPYKIPVGTVGAILMCIPPTILI 380
           WLSFQ+IVAAENFLYCFGMI+EFIAFV+LRM+YPA +RPY IPVGT GAILMCIPPT+LI
Sbjct: 362 WLSFQEIVAAENFLYCFGMIMEFIAFVKLRMRYPAASRPYMIPVGTTGAILMCIPPTLLI 421

Query: 379 GVVLALCSLKVFLVSLGAILIGLVLYPCLKQAEKRQWLRFSVNPKLQDINS 227
            VVLAL S KV ++SL A++IGLV+ PCL  AEK++WLRFS++  L D +S
Sbjct: 422 CVVLALASFKVMVISLLAVMIGLVMQPCLLYAEKKRWLRFSMSSDLPDFHS 472


>emb|CBI37826.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score =  270 bits (689), Expect = 3e-70
 Identities = 132/171 (77%), Positives = 153/171 (89%)
 Frame = -2

Query: 739 QGASAMSNMGMFVTEMSSDSFQLLGMAERGMLPAFFSKRSRHGTPIIGILFSASGVLLLS 560
           QGASA+SNMGMFV EMSSDSFQLLGMAERGMLP FF+KRSR+GTP+ GILFSASGV+LLS
Sbjct: 323 QGASALSNMGMFVAEMSSDSFQLLGMAERGMLPDFFAKRSRYGTPLTGILFSASGVILLS 382

Query: 559 WLSFQDIVAAENFLYCFGMILEFIAFVRLRMKYPATARPYKIPVGTVGAILMCIPPTILI 380
           WLSFQ+IVAAENFLYCFGMI+EFIAFV+LRM+YPA +RPY IPVGT GAILMCIPPT+LI
Sbjct: 383 WLSFQEIVAAENFLYCFGMIMEFIAFVKLRMRYPAASRPYMIPVGTTGAILMCIPPTLLI 442

Query: 379 GVVLALCSLKVFLVSLGAILIGLVLYPCLKQAEKRQWLRFSVNPKLQDINS 227
            VVLAL S KV ++SL A++IGLV+ PCL  AEK++WLRFS++  L D +S
Sbjct: 443 CVVLALASFKVMVISLLAVMIGLVMQPCLLYAEKKRWLRFSMSSDLPDFHS 493


>ref|XP_002280603.1| PREDICTED: uncharacterized transporter lpg1691 isoform 1 [Vitis
           vinifera]
          Length = 469

 Score =  270 bits (689), Expect = 3e-70
 Identities = 132/171 (77%), Positives = 153/171 (89%)
 Frame = -2

Query: 739 QGASAMSNMGMFVTEMSSDSFQLLGMAERGMLPAFFSKRSRHGTPIIGILFSASGVLLLS 560
           QGASA+SNMGMFV EMSSDSFQLLGMAERGMLP FF+KRSR+GTP+ GILFSASGV+LLS
Sbjct: 288 QGASALSNMGMFVAEMSSDSFQLLGMAERGMLPDFFAKRSRYGTPLTGILFSASGVILLS 347

Query: 559 WLSFQDIVAAENFLYCFGMILEFIAFVRLRMKYPATARPYKIPVGTVGAILMCIPPTILI 380
           WLSFQ+IVAAENFLYCFGMI+EFIAFV+LRM+YPA +RPY IPVGT GAILMCIPPT+LI
Sbjct: 348 WLSFQEIVAAENFLYCFGMIMEFIAFVKLRMRYPAASRPYMIPVGTTGAILMCIPPTLLI 407

Query: 379 GVVLALCSLKVFLVSLGAILIGLVLYPCLKQAEKRQWLRFSVNPKLQDINS 227
            VVLAL S KV ++SL A++IGLV+ PCL  AEK++WLRFS++  L D +S
Sbjct: 408 CVVLALASFKVMVISLLAVMIGLVMQPCLLYAEKKRWLRFSMSSDLPDFHS 458


Top