BLASTX nr result

ID: Coptis24_contig00009930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009930
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27861.3| unnamed protein product [Vitis vinifera]               99   6e-19
ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249...    99   6e-19
emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]    99   6e-19
gb|AFK47746.1| unknown [Lotus japonicus]                               84   1e-14
ref|XP_003534937.1| PREDICTED: uncharacterized protein LOC100806...    75   5e-12

>emb|CBI27861.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -2

Query: 547 TAATTTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 404
           T+  TTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE
Sbjct: 108 TSPATTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 155


>ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249046 [Vitis vinifera]
          Length = 1152

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -2

Query: 547  TAATTTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 404
            T+  TTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE
Sbjct: 1100 TSPATTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 1147


>emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]
          Length = 1134

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -2

Query: 547  TAATTTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 404
            T+  TTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE
Sbjct: 1082 TSPATTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 1129


>gb|AFK47746.1| unknown [Lotus japonicus]
          Length = 180

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -2

Query: 547 TAATTTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPNE 404
           +A  TT V PGETLWSISSR+ G+GAKWKELAALNPHIRNPNVI PN+
Sbjct: 128 SAPVTTKVPPGETLWSISSRILGSGAKWKELAALNPHIRNPNVIIPND 175


>ref|XP_003534937.1| PREDICTED: uncharacterized protein LOC100806958 [Glycine max]
          Length = 1189

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 34/46 (73%), Positives = 37/46 (80%)
 Frame = -2

Query: 544  AATTTTVQPGETLWSISSRVHGTGAKWKELAALNPHIRNPNVIFPN 407
            A  TT  QPG++LWSISSR+ G   KWKELAALNPHIRNPNVI PN
Sbjct: 1144 APVTTKGQPGDSLWSISSRIDGARGKWKELAALNPHIRNPNVILPN 1189


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