BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009919
         (2435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   116   2e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   115   4e-23
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-22
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   110   1e-21
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...   107   2e-20

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  116 bits (291), Expect = 2e-23
 Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 52/325 (16%)
 Frame = -3

Query: 1833 IRLPFNSHCI---GSSQGWLAIEEAQGIKQTSSIRLLNPFLAVNNEIRLPLLTPTPS--- 1672
            ++LP  SH     GSS GWL I     + +   I LLNP     +++ LP L+  P+   
Sbjct: 78   LQLPEASHRRRRRGSSHGWLLI-----LDEAPEIFLLNPL--TRSKVHLPPLSTFPNVVR 130

Query: 1671 -------------------------EPWSSKINKIVLSANPASTSDYVVMAIHSALSVLA 1567
                                     +   S I K +LS++PA+ SD++ + I +    LA
Sbjct: 131  FNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLA 190

Query: 1566 FWRFGDEAWTRINCLEAFY-DIIYYKHQFYAVNSSGQVLLCDISSPHPVVRLVAESPPLT 1390
              R  D++WT +   +++  D+I+++  FYAVN  G + +CD+S   P V ++ E P   
Sbjct: 191  LCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII-EMPQQF 249

Query: 1389 GPNAKNYLVELSGNLLCIFREVQ----------DFKWKTTGCKVFKLDPSKLVWKKLESL 1240
            G + + YLVE    LL + R +              ++TT  +V +LD     W+ + SL
Sbjct: 250  GGDLQ-YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSL 308

Query: 1239 CGHILFLGGISSMSVSTSHFPGCCKSNCIY----FGYDACSKLGWKASCFDTIVFYLEDG 1072
                LFLG   S+S+S+  FPG CK NCIY    +  D    +G +    D  +F LEDG
Sbjct: 309  GDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDYSEDNYDGIGGEQ---DLGIFNLEDG 364

Query: 1071 SFERLVPPMCKH------SPLWIEP 1015
            S E   P  C H       PLW+ P
Sbjct: 365  SIE---PLPCSHFRIRWPPPLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  115 bits (289), Expect = 4e-23
 Identities = 100/325 (30%), Positives = 151/325 (46%), Gaps = 52/325 (16%)
 Frame = -3

Query: 1833 IRLPFNSHCI---GSSQGWLAIEEAQGIKQTSSIRLLNPFLAVNNEIRLPLLTPTPS--- 1672
            ++LP  SH     GSS GWL I     + +   I LLNP     +++ LP L+  P+   
Sbjct: 78   LQLPEASHRRRRRGSSHGWLLI-----LDEAPEIFLLNPL--TRSKVHLPPLSTFPNVVR 130

Query: 1671 -------------------------EPWSSKINKIVLSANPASTSDYVVMAIHSALSVLA 1567
                                     +   S I K +LS++PA+ SD++ + I +    LA
Sbjct: 131  FNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLA 190

Query: 1566 FWRFGDEAWTRINCLEAFY-DIIYYKHQFYAVNSSGQVLLCDISSPHPVVRLVAESPPLT 1390
              R  D++WT +   +++  D+I+++  FYAVN  G + +CD+S   P V ++ E P   
Sbjct: 191  LCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII-EMPQQF 249

Query: 1389 GPNAKNYLVELSGNLLCIFREVQ----------DFKWKTTGCKVFKLDPSKLVWKKLESL 1240
            G + + YLVE    LL + R +              ++TT  +V +LD     W+ + SL
Sbjct: 250  GGDLQ-YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSL 308

Query: 1239 CGHILFLGGISSMSVSTSHFPGCCKSNCIY----FGYDACSKLGWKASCFDTIVFYLEDG 1072
                LFLG   S+S+S+  FPG CK NCIY    +  D    +G +    D  +F LEDG
Sbjct: 309  GDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDYSEDNYDGIGGEQ---DLGIFNLEDG 364

Query: 1071 SFERLVPPMCKH------SPLWIEP 1015
            S E   P  C H       PLW+ P
Sbjct: 365  SIE---PLPCSHFRIRWPPPLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  114 bits (284), Expect = 2e-22
 Identities = 100/327 (30%), Positives = 151/327 (46%), Gaps = 49/327 (14%)
 Frame = -3

Query: 1848 YDLEEIRLPFNSHC---IGSSQGWLAIEEAQGIKQTSSIRLLNPFLAVNNEIRLPLLTPT 1678
            Y    + LP  SH     GSS GWL I     +  + SI ++NP      +I LP ++  
Sbjct: 75   YKFHSLNLPEASHRKKHCGSSHGWLII-----LDDSPSILVINPL--TRRKIHLPAISSF 127

Query: 1677 PS----------------EPWSSK------------INKIVLSANPASTSD--YVVMAIH 1588
            P+                 P   +            I K+V+S++P       +V MAI 
Sbjct: 128  PNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAIL 187

Query: 1587 SALSVLAFWRFGDEAWTRINCLEAFY-DIIYYKHQFYAVNSSGQVLLCDISSPHPVVRLV 1411
             +   LA+ + GDE W  +    +F  D+IY+   FYAVN +GQ+++CD++   P V  +
Sbjct: 188  CSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFI 247

Query: 1410 AESPPLTGPNAKNYLVELSGNLLCIFR------EVQDFKWKTTGCKVFKLDPSKLVWKKL 1249
             E+P   G + + YLV     LL + R      E   F +KT   +VFKLD +   W+++
Sbjct: 248  -ETPRQIGGDMQ-YLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERV 305

Query: 1248 ESLCGHILFLGGISSMSVSTSHFPGCCKSNCIYFGYD-ACSKLGWKASCFDTIVFYLEDG 1072
             SL   +LF+G  SS+++S S   G C  +CIY+  D + +         D  +F L DG
Sbjct: 306  TSLGDMMLFIGENSSLALSASGLSG-CMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDG 364

Query: 1071 SFERLVPPMCKHS--------PLWIEP 1015
            S E L P   ++S        PLWI P
Sbjct: 365  SIEPL-PCYPRNSYSRLQWPPPLWISP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  110 bits (276), Expect = 1e-21
 Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 49/315 (15%)
 Frame = -3

Query: 1812 HCIGSSQGWLAIEEAQGIKQTSSIRLLNPFLAVNNEIRLPLLTPTPS------------- 1672
            HC GSS GWL I     +  T +I L+NP      ++ LP L+  P+             
Sbjct: 92   HC-GSSHGWLMI-----LDDTPTILLINPLTRA--KLSLPPLSSFPNVISFNYSDIGREY 143

Query: 1671 ---------------EPWSSKINKIVLSANPASTSDYVVMAIHSALSVLAFWRFGDEAWT 1537
                           +   S I K+VLS++P   +++VV+AI +    LA+ R GD++W+
Sbjct: 144  ALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWS 203

Query: 1536 RINCLEAFY-DIIYYKHQFYAVNSSGQVLLCDISSPHPVVRLVAESPPLTGPNAKNYLVE 1360
             +    +F  D+I+    FYAVN +GQ+++CDISS  P V  + E+P   G + + YLV 
Sbjct: 204  LVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFM-ETPRQAGGDMQ-YLVN 261

Query: 1359 LSGNLLCIFREVQ------------DFKWKTTGCKVFKLDPSKLVWKKLESLCGHILFLG 1216
                LL + R +                ++T   +VF+LD +   W ++ +L    LF+G
Sbjct: 262  SGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIG 321

Query: 1215 GISSMSVSTSHFPGCCKSNCIYFGYDAC-SKLGWKASCFDTIVFYLEDGSFERL------ 1057
              SS+S+S + F G C  NCIY+  D   +         D  +F L D + E L      
Sbjct: 322  ENSSLSLSATDFSG-CMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRN 380

Query: 1056 -VPPMCKHSPLWIEP 1015
               P+    PLW+ P
Sbjct: 381  FTSPLQWSPPLWVSP 395


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
            gi|223551310|gb|EEF52796.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  107 bits (266), Expect = 2e-20
 Identities = 95/295 (32%), Positives = 138/295 (46%), Gaps = 38/295 (12%)
 Frame = -3

Query: 1818 NSHCIGSSQGWLAIEEAQGIKQTSSIRLLNPFLAVNNEIRLPLLTPTPSEPWS------- 1660
            +  C GSS GWL +     ++ T SI LLNP     + I LP L+  P+ P         
Sbjct: 85   DKRCCGSSHGWLVM-----VEDTPSIFLLNPL--TKSRIELPSLSTFPNFPTEVIYQNSR 137

Query: 1659 ----------------SKINKIVLSANPASTSDYVVMAIHSALSV---LAFWRFGDEAW- 1540
                            + I K ++S +P S   ++VMAI+  ++    +AF + GD A  
Sbjct: 138  NLNEYFIRNNKLRIRETYIRKAIVSEDP-SVGSFMVMAIYKTINGSENIAFCKSGDAALF 196

Query: 1539 -TRINCLEAFY-DIIYYKHQFYAVNSSGQVLLCDISSPHPVVRLVAESP--PLTGPNAKN 1372
             T+    E  Y D+++++ +FY VN  G+V +C      P V  VA+ P  PL     + 
Sbjct: 197  TTQETSQEIHYQDVMFHRGKFYMVNDKGRVSICITDINPPSVIHVADPPPVPLLMGYKQW 256

Query: 1371 YLVELSGNLLCIFR----EVQDFKWKTTGCKVFKLDPSKLVWKKLESLCGHILFLGGISS 1204
            YL  L+ +L+ + R     V  ++++T    V+KLD S   W KL+ L   I FLG    
Sbjct: 257  YLATLNEDLILVGRFRNYRVSGYEYQTHKFIVYKLDSSSSNWSKLDGLGDMIFFLGWNCF 316

Query: 1203 MSVSTSHFPGCCKSNCIYFGYD---ACSKLGWKASCFDTIVFYLEDGSFERLVPP 1048
             S+S +H  G C  NCIYF  D     S   W+    D  VF  +DGS  RL PP
Sbjct: 317  DSIS-AHNCGNCSGNCIYFTDDNFIVDSDFSWEG--HDYGVFNFDDGSVRRLDPP 368