BLASTX nr result

ID: Coptis24_contig00009918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009918
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   113   1e-23
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   111   7e-23
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   110   1e-22
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   110   1e-22
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   109   3e-22

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = +2

Query: 2    SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181
            SSTDQSTVDTDIPY+L GLVFAL+QLLSI++LMS +AWQ           S+WYQAYYIT
Sbjct: 988  SSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFVVFAISIWYQAYYIT 1047

Query: 182  AARELARMAGTSKSPIVHH 238
             ARELARM G  K+PI+HH
Sbjct: 1048 TARELARMVGIRKAPILHH 1066


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/79 (67%), Positives = 61/79 (77%)
 Frame = +2

Query: 2    SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181
            SSTDQS VDTDIPY+L GLVFAL+QLLSI++LMS +AWQ           S+WYQAYYIT
Sbjct: 986  SSTDQSIVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFAVLPISIWYQAYYIT 1045

Query: 182  AARELARMAGTSKSPIVHH 238
             ARELARM G  K+PI+HH
Sbjct: 1046 TARELARMVGIRKAPILHH 1064


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = +2

Query: 2    SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181
            SSTDQSTVDTDIPY+L GL FAL+QLLSI++LMS +AWQ           S+WYQAYYI 
Sbjct: 998  SSTDQSTVDTDIPYRLAGLAFALIQLLSIIVLMSQVAWQVFLLFVSILAISIWYQAYYIA 1057

Query: 182  AARELARMAGTSKSPIVHH 238
             ARELARM G  K+PI+HH
Sbjct: 1058 TARELARMVGVRKAPILHH 1076


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = +2

Query: 2    SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181
            SSTDQSTVDTDIPY+L GL FAL+QLL I++LMS +AWQ           S+WYQAYYIT
Sbjct: 903  SSTDQSTVDTDIPYRLAGLAFALIQLLCIVILMSQVAWQVFPIFLVILGISIWYQAYYIT 962

Query: 182  AARELARMAGTSKSPIVHH 238
             ARELARM G  K+PI+HH
Sbjct: 963  TARELARMVGIRKAPILHH 981


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = +2

Query: 2    SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181
            SS DQSTVDTDIPY+L GL FAL+QLLSI++LMS +AWQ           S+WYQAYYIT
Sbjct: 999  SSMDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQVAWQIFILFLVILGISLWYQAYYIT 1058

Query: 182  AARELARMAGTSKSPIVHH 238
             ARELARM G  K+PI+HH
Sbjct: 1059 TARELARMVGIRKAPILHH 1077


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