BLASTX nr result
ID: Coptis24_contig00009918
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009918 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3... 113 1e-23 ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3... 111 7e-23 ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3... 110 1e-22 ref|XP_002312645.1| multidrug resistance protein ABC transporter... 110 1e-22 ref|XP_002515003.1| multidrug resistance-associated protein 2, 6... 109 3e-22 >ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1454 Score = 113 bits (283), Expect = 1e-23 Identities = 54/79 (68%), Positives = 62/79 (78%) Frame = +2 Query: 2 SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181 SSTDQSTVDTDIPY+L GLVFAL+QLLSI++LMS +AWQ S+WYQAYYIT Sbjct: 988 SSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFVVFAISIWYQAYYIT 1047 Query: 182 AARELARMAGTSKSPIVHH 238 ARELARM G K+PI+HH Sbjct: 1048 TARELARMVGIRKAPILHH 1066 >ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1452 Score = 111 bits (277), Expect = 7e-23 Identities = 53/79 (67%), Positives = 61/79 (77%) Frame = +2 Query: 2 SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181 SSTDQS VDTDIPY+L GLVFAL+QLLSI++LMS +AWQ S+WYQAYYIT Sbjct: 986 SSTDQSIVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILLFFAVLPISIWYQAYYIT 1045 Query: 182 AARELARMAGTSKSPIVHH 238 ARELARM G K+PI+HH Sbjct: 1046 TARELARMVGIRKAPILHH 1064 >ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1462 Score = 110 bits (275), Expect = 1e-22 Identities = 52/79 (65%), Positives = 60/79 (75%) Frame = +2 Query: 2 SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181 SSTDQSTVDTDIPY+L GL FAL+QLLSI++LMS +AWQ S+WYQAYYI Sbjct: 998 SSTDQSTVDTDIPYRLAGLAFALIQLLSIIVLMSQVAWQVFLLFVSILAISIWYQAYYIA 1057 Query: 182 AARELARMAGTSKSPIVHH 238 ARELARM G K+PI+HH Sbjct: 1058 TARELARMVGVRKAPILHH 1076 >ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222852465|gb|EEE90012.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1361 Score = 110 bits (275), Expect = 1e-22 Identities = 52/79 (65%), Positives = 60/79 (75%) Frame = +2 Query: 2 SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181 SSTDQSTVDTDIPY+L GL FAL+QLL I++LMS +AWQ S+WYQAYYIT Sbjct: 903 SSTDQSTVDTDIPYRLAGLAFALIQLLCIVILMSQVAWQVFPIFLVILGISIWYQAYYIT 962 Query: 182 AARELARMAGTSKSPIVHH 238 ARELARM G K+PI+HH Sbjct: 963 TARELARMVGIRKAPILHH 981 >ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] gi|223546054|gb|EEF47557.1| multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis] Length = 1464 Score = 109 bits (272), Expect = 3e-22 Identities = 52/79 (65%), Positives = 60/79 (75%) Frame = +2 Query: 2 SSTDQSTVDTDIPYKLVGLVFALVQLLSIMLLMSYIAWQXXXXXXXXXXXSVWYQAYYIT 181 SS DQSTVDTDIPY+L GL FAL+QLLSI++LMS +AWQ S+WYQAYYIT Sbjct: 999 SSMDQSTVDTDIPYRLAGLAFALIQLLSIIILMSQVAWQIFILFLVILGISLWYQAYYIT 1058 Query: 182 AARELARMAGTSKSPIVHH 238 ARELARM G K+PI+HH Sbjct: 1059 TARELARMVGIRKAPILHH 1077