BLASTX nr result

ID: Coptis24_contig00009896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009896
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271683.1| PREDICTED: uncharacterized protein LOC100256...   115   1e-23
ref|XP_004134646.1| PREDICTED: uncharacterized protein LOC101211...   102   9e-20
gb|ACU19248.1| unknown [Glycine max]                                  102   2e-19
gb|AFK39268.1| unknown [Lotus japonicus]                              101   3e-19
ref|XP_002867998.1| hypothetical protein ARALYDRAFT_493019 [Arab...    96   1e-17

>ref|XP_002271683.1| PREDICTED: uncharacterized protein LOC100256572 [Vitis vinifera]
           gi|147841804|emb|CAN62206.1| hypothetical protein
           VITISV_002207 [Vitis vinifera]
           gi|297740753|emb|CBI30935.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  115 bits (289), Expect = 1e-23
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = +2

Query: 227 RFDPSRMIGIIRRKALIKDLAAVYHAECLACCQDLLELQRKWEETNMEIKASEEMRKEIM 406
           RFDPSRMIGIIRRKALIKDLAAVYHAECLA CQ+LLELQRKWEE  + IK +E+ RKE M
Sbjct: 50  RFDPSRMIGIIRRKALIKDLAAVYHAECLAYCQELLELQRKWEEPFVNIKTTEDSRKETM 109

Query: 407 RQPKRLKKTR 436
           R PKR+KK+R
Sbjct: 110 RPPKRIKKSR 119


>ref|XP_004134646.1| PREDICTED: uncharacterized protein LOC101211064 [Cucumis sativus]
          Length = 98

 Score =  102 bits (255), Expect = 9e-20
 Identities = 49/70 (70%), Positives = 58/70 (82%)
 Frame = +2

Query: 227 RFDPSRMIGIIRRKALIKDLAAVYHAECLACCQDLLELQRKWEETNMEIKASEEMRKEIM 406
           RFDPSRMIGIIRRKALIK+LAA YHAECL  CQ+LLELQRKW+E  +E+KA ++ RKE  
Sbjct: 29  RFDPSRMIGIIRRKALIKELAAAYHAECLVYCQELLELQRKWDEPYIELKAPDDPRKETT 88

Query: 407 RQPKRLKKTR 436
           +  KR KK+R
Sbjct: 89  KPSKRQKKSR 98


>gb|ACU19248.1| unknown [Glycine max]
          Length = 85

 Score =  102 bits (253), Expect = 2e-19
 Identities = 49/71 (69%), Positives = 57/71 (80%)
 Frame = +2

Query: 224 LRFDPSRMIGIIRRKALIKDLAAVYHAECLACCQDLLELQRKWEETNMEIKASEEMRKEI 403
           L FDPSR +GII+RKALIKDLAAVYHAECLA CQ+LLELQ KWEE  +++K  EE +KE 
Sbjct: 15  LSFDPSRTVGIIKRKALIKDLAAVYHAECLAYCQELLELQTKWEEPYIDLKTPEESKKET 74

Query: 404 MRQPKRLKKTR 436
            R  KR+KK R
Sbjct: 75  ARPSKRVKKLR 85


>gb|AFK39268.1| unknown [Lotus japonicus]
          Length = 92

 Score =  101 bits (251), Expect = 3e-19
 Identities = 46/70 (65%), Positives = 59/70 (84%)
 Frame = +2

Query: 227 RFDPSRMIGIIRRKALIKDLAAVYHAECLACCQDLLELQRKWEETNMEIKASEEMRKEIM 406
           RFDPSRM+G+I+RKALIKDLAAVYHAECL+ CQ+LLELQ KW+E  +++K  E+ +KE +
Sbjct: 23  RFDPSRMVGVIKRKALIKDLAAVYHAECLSYCQELLELQSKWDEPFIDLKPIEDSKKETV 82

Query: 407 RQPKRLKKTR 436
           R  KR+KK R
Sbjct: 83  RPSKRIKKLR 92


>ref|XP_002867998.1| hypothetical protein ARALYDRAFT_493019 [Arabidopsis lyrata subsp.
           lyrata] gi|297313834|gb|EFH44257.1| hypothetical protein
           ARALYDRAFT_493019 [Arabidopsis lyrata subsp. lyrata]
          Length = 107

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = +2

Query: 227 RFDPSRMIGIIRRKALIKDLAAVYHAECLACCQDLLELQRKWEETNMEIKASEEMRKEIM 406
           RFDPSRMIGII+RKALIKDLAA YHAECLA C++LLELQ++ +E  ++ KA+E+MRKE +
Sbjct: 37  RFDPSRMIGIIKRKALIKDLAAAYHAECLALCRELLELQKRKDEPFLDTKATEDMRKETV 96

Query: 407 R-QPKRLKKTR 436
           R   KR KK R
Sbjct: 97  RSSSKRAKKKR 107


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