BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009894
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis...   374   e-101
ref|XP_002526504.1| protein with unknown function [Ricinus commu...   372   e-101
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...   368   1e-99
ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group] g...   367   2e-99
tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, parti...   367   3e-99

>ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
          Length = 208

 Score =  374 bits (959), Expect = e-101
 Identities = 191/195 (97%), Positives = 192/195 (98%)
 Frame = +3

Query: 3   FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 182
           FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS
Sbjct: 14  FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

Query: 183 LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 362
           LIPSYIRDSSVAVIVYDVASRQSFLNT+KWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 363 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 542
           IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN
Sbjct: 134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 193

Query: 543 ANTSQSQPQGGGCSC 587
            N SQSQPQ GGCSC
Sbjct: 194 TNASQSQPQAGGCSC 208


>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
           gi|223534179|gb|EEF35895.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score =  372 bits (955), Expect = e-101
 Identities = 190/195 (97%), Positives = 191/195 (97%)
 Frame = +3

Query: 3   FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 182
           FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS
Sbjct: 14  FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

Query: 183 LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 362
           LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 363 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 542
           IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS KQEDMVDVNLKSSN
Sbjct: 134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSN 193

Query: 543 ANTSQSQPQGGGCSC 587
            N SQSQPQ GGC+C
Sbjct: 194 TNASQSQPQSGGCAC 208


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  368 bits (944), Expect = 1e-99
 Identities = 188/195 (96%), Positives = 192/195 (98%)
 Frame = +3

Query: 3   FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 182
           FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS
Sbjct: 14  FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

Query: 183 LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 362
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVR+ERGSDVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 363 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 542
           IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+KQEDMVDVNLKSSN
Sbjct: 134 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSKQEDMVDVNLKSSN 193

Query: 543 ANTSQSQPQGGGCSC 587
           AN SQSQ Q GGC+C
Sbjct: 194 ANASQSQQQSGGCAC 208


>ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
           gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6
           [Oryza sativa Japonica Group]
           gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa
           Japonica Group]
          Length = 208

 Score =  367 bits (942), Expect = 2e-99
 Identities = 188/195 (96%), Positives = 191/195 (97%)
 Frame = +3

Query: 3   FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 182
           FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS
Sbjct: 14  FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

Query: 183 LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 362
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 363 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 542
           IEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN
Sbjct: 134 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 193

Query: 543 ANTSQSQPQGGGCSC 587
           AN+SQSQ Q GGCSC
Sbjct: 194 ANSSQSQAQAGGCSC 208


>tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
          Length = 249

 Score =  367 bits (941), Expect = 3e-99
 Identities = 194/231 (83%), Positives = 201/231 (87%), Gaps = 9/231 (3%)
 Frame = +3

Query: 3   FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 182
           FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS
Sbjct: 14  FLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

Query: 183 LIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVDKRQVS 362
           LIPSYIRDSSVAVIV+DVASRQSFLNTSKWI+EVRTERGSDVIIVLVGNKTDLVDKRQVS
Sbjct: 74  LIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVDKRQVS 133

Query: 363 IEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSN 542
           IEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNL+S N
Sbjct: 134 IEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAKQEDMVDVNLRSGN 193

Query: 543 ANTSQSQPQGGGCSC*CEMLSQDSHVS---------TTFCSFGFATSFLSC 668
           AN+SQSQ Q GGCSC    LS  + VS           FC      + LSC
Sbjct: 194 ANSSQSQAQAGGCSCYSPSLSYSTIVSLLLYPIYHYRVFCRVTVFRTVLSC 244