BLASTX nr result

ID: Coptis24_contig00009893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009893
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81556.1| hypothetical protein VITISV_040398 [Vitis vinife...   328   2e-87
ref|XP_003635545.1| PREDICTED: UPF0308 protein At2g37240, chloro...   325   2e-86
ref|XP_002263959.2| PREDICTED: UPF0308 protein At2g37240, chloro...   324   3e-86
ref|XP_002533575.1| conserved hypothetical protein [Ricinus comm...   316   7e-84
ref|XP_002320012.1| predicted protein [Populus trichocarpa] gi|2...   313   8e-83

>emb|CAN81556.1| hypothetical protein VITISV_040398 [Vitis vinifera]
            gi|342160848|gb|AEL16460.1| type II peroxiredoxin 1
            [Vitis vinifera]
          Length = 256

 Score =  328 bits (840), Expect = 2e-87
 Identities = 160/226 (70%), Positives = 181/226 (80%)
 Frame = -3

Query: 1027 HLVVRASTTTYESNEAISEILGDVGIFTAAGEPVLFKDLWDQKEGMAVVALLRHFGCPCC 848
            +L+VRAS+++ +    I EILG+V IFTA+GEPVLFKDLWDQ+EGMAVVALLRHFGCPCC
Sbjct: 53   NLLVRASSSSSDFTSTIGEILGEVSIFTASGEPVLFKDLWDQEEGMAVVALLRHFGCPCC 112

Query: 847  WEFASALKDSKSRFDSAGVKLIAVGVGTPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 668
            W+ ASALK+SK RFDSAGVKLIAVGVGTP+K                            A
Sbjct: 113  WDLASALKESKERFDSAGVKLIAVGVGTPDKARIL------------------------A 148

Query: 667  ERLPFPLDCLYCDPDRKAYDVLGLYYGFGRTFFNPASAKVLSRFNTLREAVKNYTIEATP 488
            ERLPFPLDCLY DPDRKAYDVLGLYYGFGRTFFNPASAKVL RF  L++AVKNYTI+ATP
Sbjct: 149  ERLPFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVKNYTIKATP 208

Query: 487  DDRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHAPLSEILDICCTYP 350
            DD+SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHAPL ++ D+CC  P
Sbjct: 209  DDKSSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVP 254


>ref|XP_003635545.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis vinifera]
            gi|296087029|emb|CBI33293.3| unnamed protein product
            [Vitis vinifera]
          Length = 256

 Score =  325 bits (832), Expect = 2e-86
 Identities = 159/226 (70%), Positives = 180/226 (79%)
 Frame = -3

Query: 1027 HLVVRASTTTYESNEAISEILGDVGIFTAAGEPVLFKDLWDQKEGMAVVALLRHFGCPCC 848
            +L+VRAS+++ +    I EIL +V IFTA+GEPVLFKDLWDQ+EGMAVVALLRHFGCPCC
Sbjct: 53   NLLVRASSSSSDFTSTIGEILREVSIFTASGEPVLFKDLWDQEEGMAVVALLRHFGCPCC 112

Query: 847  WEFASALKDSKSRFDSAGVKLIAVGVGTPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 668
            W+ ASALK+SK RFDSAGVKLIAVGVGTP+K                            A
Sbjct: 113  WDLASALKESKERFDSAGVKLIAVGVGTPDKARIL------------------------A 148

Query: 667  ERLPFPLDCLYCDPDRKAYDVLGLYYGFGRTFFNPASAKVLSRFNTLREAVKNYTIEATP 488
            ERLPFPLDCLY DPDRKAYDVLGLYYGFGRTFFNPASAKVL RF  L++AVKNYTI+ATP
Sbjct: 149  ERLPFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVKNYTIKATP 208

Query: 487  DDRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHAPLSEILDICCTYP 350
            DD+SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHAPL ++ D+CC  P
Sbjct: 209  DDKSSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVP 254


>ref|XP_002263959.2| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis vinifera]
          Length = 255

 Score =  324 bits (831), Expect = 3e-86
 Identities = 161/225 (71%), Positives = 180/225 (80%)
 Frame = -3

Query: 1024 LVVRASTTTYESNEAISEILGDVGIFTAAGEPVLFKDLWDQKEGMAVVALLRHFGCPCCW 845
            L+VRAS+T+ + N  I EILG+V +FTA+GE VLFKDLWDQKEGMAVVALLRHFGCPCCW
Sbjct: 54   LLVRASSTS-DFNPDIGEILGEVSVFTASGESVLFKDLWDQKEGMAVVALLRHFGCPCCW 112

Query: 844  EFASALKDSKSRFDSAGVKLIAVGVGTPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE 665
            + ASALK+SK RFDSAGVKLIAVGVGTP+K                            AE
Sbjct: 113  DLASALKESKERFDSAGVKLIAVGVGTPDKARIL------------------------AE 148

Query: 664  RLPFPLDCLYCDPDRKAYDVLGLYYGFGRTFFNPASAKVLSRFNTLREAVKNYTIEATPD 485
            RLPFPLDCLY DPDRKAYDVLGLYYGFGRTFFNPASAKVL RF  L++AVKNYTI+ATPD
Sbjct: 149  RLPFPLDCLYADPDRKAYDVLGLYYGFGRTFFNPASAKVLLRFEALQKAVKNYTIKATPD 208

Query: 484  DRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHAPLSEILDICCTYP 350
            D+SSVLQQGGMFVFKGKQL+Y+RKDEGTGDHAPL ++ D+CC  P
Sbjct: 209  DKSSVLQQGGMFVFKGKQLVYARKDEGTGDHAPLDDVFDVCCKVP 253


>ref|XP_002533575.1| conserved hypothetical protein [Ricinus communis]
            gi|223526552|gb|EEF28810.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 255

 Score =  316 bits (810), Expect = 7e-84
 Identities = 153/225 (68%), Positives = 178/225 (79%)
 Frame = -3

Query: 1024 LVVRASTTTYESNEAISEILGDVGIFTAAGEPVLFKDLWDQKEGMAVVALLRHFGCPCCW 845
            L++RAS++ Y  N  I ++LGDV IFTAAGEPV+FK+LWDQ EG+AVVALLRHFGCPCCW
Sbjct: 55   LIMRASSSDYAGN--IGDVLGDVTIFTAAGEPVMFKNLWDQNEGIAVVALLRHFGCPCCW 112

Query: 844  EFASALKDSKSRFDSAGVKLIAVGVGTPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE 665
            E AS LK++KS+FDSAGVKLIA+GVG PNK                            A+
Sbjct: 113  ELASVLKEAKSKFDSAGVKLIAIGVGAPNKARML------------------------AD 148

Query: 664  RLPFPLDCLYCDPDRKAYDVLGLYYGFGRTFFNPASAKVLSRFNTLREAVKNYTIEATPD 485
            RLPFP+DCLY DP+R+AY+VLGLYYGFGRTFFNPASAKV SRF++LR+AVKNYTIEATPD
Sbjct: 149  RLPFPMDCLYADPNREAYNVLGLYYGFGRTFFNPASAKVFSRFDSLRQAVKNYTIEATPD 208

Query: 484  DRSSVLQQGGMFVFKGKQLLYSRKDEGTGDHAPLSEILDICCTYP 350
            DRS VLQQGGMFVFKGKQLLY+RKDEGTGDHA L ++ D+CC  P
Sbjct: 209  DRSGVLQQGGMFVFKGKQLLYARKDEGTGDHASLDDVFDVCCKVP 253


>ref|XP_002320012.1| predicted protein [Populus trichocarpa] gi|222860785|gb|EEE98327.1|
            predicted protein [Populus trichocarpa]
          Length = 199

 Score =  313 bits (801), Expect = 8e-83
 Identities = 152/221 (68%), Positives = 173/221 (78%)
 Frame = -3

Query: 1012 ASTTTYESNEAISEILGDVGIFTAAGEPVLFKDLWDQKEGMAVVALLRHFGCPCCWEFAS 833
            AS +++ ++  I E+L DV IFT AG+PV+FKDLWDQ EG+AVVALLRHFGCPCCWE AS
Sbjct: 3    ASASSFSAD--IGEVLSDVSIFTTAGQPVMFKDLWDQNEGIAVVALLRHFGCPCCWELAS 60

Query: 832  ALKDSKSRFDSAGVKLIAVGVGTPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERLPF 653
            +LK+SK +FDS+GVKLIA+GVGTPNK                            AERLPF
Sbjct: 61   SLKESKEKFDSSGVKLIAIGVGTPNKARLL------------------------AERLPF 96

Query: 652  PLDCLYCDPDRKAYDVLGLYYGFGRTFFNPASAKVLSRFNTLREAVKNYTIEATPDDRSS 473
            P+DCLY DP+RKAYDVLGLYYG GRTFFNPASAKV SRF+ LR+AVKNYTIEATPDDRS 
Sbjct: 97   PMDCLYADPERKAYDVLGLYYGLGRTFFNPASAKVFSRFDALRKAVKNYTIEATPDDRSG 156

Query: 472  VLQQGGMFVFKGKQLLYSRKDEGTGDHAPLSEILDICCTYP 350
            VLQQGGMFVFKGKQLLY+RKDEGTGDHAPL +I +ICC  P
Sbjct: 157  VLQQGGMFVFKGKQLLYARKDEGTGDHAPLDDIFEICCKVP 197


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