BLASTX nr result
ID: Coptis24_contig00009891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009891
(1544 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 615 e-174
ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 610 e-172
ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|2... 595 e-168
ref|XP_002312937.1| f-box family protein [Populus trichocarpa] g... 594 e-167
ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like ... 593 e-167
>ref|XP_003631537.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
Length = 719
Score = 615 bits (1587), Expect = e-174
Identities = 312/453 (68%), Positives = 365/453 (80%)
Frame = +1
Query: 4 GCSLLESLSLMFDVSLVLRYSFARLWLVASTHLTTLEIGYIPSVMVTESXXXXXXXXXXX 183
GC+ L++LSLMFD+SL RY+FAR W +AS +LT+LEIGY+ SVMVTE
Sbjct: 153 GCTELKTLSLMFDISLFPRYNFARAWSLASENLTSLEIGYVSSVMVTELLSPNVGPHQPP 212
Query: 184 XXXXXXXIPSIQKLCLSVDYITDNMVGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGL 363
+PS+Q+LCLSVDYITD MV T+SKCL+NL HLDLRDAP++EP FDLTNSG
Sbjct: 213 NHLQPSILPSLQRLCLSVDYITDTMVETVSKCLINLTHLDLRDAPIIEPRVTFDLTNSGF 272
Query: 364 QQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFR 543
QQINQ GKLK LSLVRSQE+L TYFKRVNDLG+LLMAD+CS+MESICLGGFCRVTD+GF+
Sbjct: 273 QQINQRGKLKHLSLVRSQEFLITYFKRVNDLGILLMADRCSSMESICLGGFCRVTDSGFK 332
Query: 544 AILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDL 723
ILH CS+L KL++ HG LT+LVF DISATSLSL +VSLRWCNLL NQAV+ LA N+DL
Sbjct: 333 TILHSCSTLYKLRVSHGMLLTNLVFLDISATSLSLTHVSLRWCNLLRNQAVISLASNLDL 392
Query: 724 RVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCR 903
RVLDLR CRN+GDEAL+AI +L KL +LLLDGSDI+D GL YL + V+ SLV+LSIR C+
Sbjct: 393 RVLDLRDCRNLGDEALQAISTLHKLKILLLDGSDITDAGLSYLREGVIGSLVSLSIRGCK 452
Query: 904 RLTDKCISAIFDGTSGKALQSLDLSNIPNLTDNVILLLAKSRVPISELRLRECPRISDMS 1083
RLTDKCISA+FD +S + LQ LDLSN+PNL+DN I LAKSRVPI ELR+R+CP I D S
Sbjct: 453 RLTDKCISALFDPSSKQELQELDLSNLPNLSDNGIFSLAKSRVPILELRMRQCPLIGDTS 512
Query: 1084 VMALASMQVEYGGWHGSRLCLLDLYGCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLV 1263
+MALASMQV+ HGS L +LDLY C GIT L+FRW K PYFPRLRW G+TGS+NRD+V
Sbjct: 513 IMALASMQVDDHRSHGSSLRVLDLYNCGGITSLSFRWLKNPYFPRLRWLGVTGSVNRDMV 572
Query: 1264 DALARSRPFLHMACRGEELGTRYGDSLDGLERH 1362
DALARSRPFLH+AC GEELGT D DGL H
Sbjct: 573 DALARSRPFLHVACHGEELGT---DHWDGLYMH 602
>ref|XP_003631565.1| PREDICTED: F-box/LRR-repeat protein 10-like [Vitis vinifera]
Length = 640
Score = 610 bits (1573), Expect = e-172
Identities = 312/456 (68%), Positives = 365/456 (80%), Gaps = 3/456 (0%)
Frame = +1
Query: 4 GCSLLESLSLMFDVSLVLRYSFARLWLVASTHLTTLEI---GYIPSVMVTESXXXXXXXX 174
GC+ L++LSLMFD+SL RY+FAR W +AS +LT+LEI GY+ SVMVTE
Sbjct: 153 GCTELKTLSLMFDISLFPRYNFARAWSLASKNLTSLEIAYIGYVSSVMVTELLSPNVGPH 212
Query: 175 XXXXXXXXXXIPSIQKLCLSVDYITDNMVGTISKCLVNLIHLDLRDAPVLEPTGAFDLTN 354
+PS+Q+LCLSVDYITD MV T+SKCL+NL HLDLRDAP++EP FDLTN
Sbjct: 213 QPPNHLRPSILPSLQRLCLSVDYITDTMVETVSKCLINLTHLDLRDAPIIEPRVTFDLTN 272
Query: 355 SGLQQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMADKCSNMESICLGGFCRVTDT 534
SG QQINQ GKLK LSLVRSQE+L TYFKRVNDLG+LLMAD+CS+MESICLGGFCRVTD+
Sbjct: 273 SGFQQINQRGKLKHLSLVRSQEFLITYFKRVNDLGILLMADRCSSMESICLGGFCRVTDS 332
Query: 535 GFRAILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINVSLRWCNLLTNQAVVRLAYN 714
GF+ ILH CS+L KL++ HG LT+LVF DISATSLSL +VSLRWCNLL NQAV+ LA N
Sbjct: 333 GFKTILHSCSTLYKLRVSHGMLLTNLVFLDISATSLSLTHVSLRWCNLLRNQAVISLASN 392
Query: 715 MDLRVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDTGLLYLGQRVMRSLVTLSIR 894
+DLRVLDLR CRN+GDEAL+AI +L KL +LLLDGSDI+D GL YL + V+ SLV+LSIR
Sbjct: 393 LDLRVLDLRDCRNLGDEALQAISTLHKLKILLLDGSDITDAGLSYLREGVIGSLVSLSIR 452
Query: 895 SCRRLTDKCISAIFDGTSGKALQSLDLSNIPNLTDNVILLLAKSRVPISELRLRECPRIS 1074
C+RLTDKCISA+FD +S + LQ LDLSN+PNL+DN I LAKSRVPI ELR+R+CP I
Sbjct: 453 GCKRLTDKCISALFDPSSKQELQELDLSNLPNLSDNGIFSLAKSRVPILELRMRQCPLIG 512
Query: 1075 DMSVMALASMQVEYGGWHGSRLCLLDLYGCKGITPLAFRWFKKPYFPRLRWFGLTGSLNR 1254
D S+MALASMQV+ HGS L +LDLY C GIT L+FRW K PYFPRLRW G+TGS+NR
Sbjct: 513 DSSIMALASMQVDDHRSHGSSLRVLDLYNCGGITSLSFRWLKNPYFPRLRWLGVTGSVNR 572
Query: 1255 DLVDALARSRPFLHMACRGEELGTRYGDSLDGLERH 1362
D+VDALARSRPFLH+AC GEELGT D DGL H
Sbjct: 573 DMVDALARSRPFLHVACHGEELGT---DHWDGLYMH 605
>ref|XP_002306206.1| predicted protein [Populus trichocarpa] gi|222849170|gb|EEE86717.1|
predicted protein [Populus trichocarpa]
Length = 643
Score = 595 bits (1535), Expect = e-168
Identities = 301/453 (66%), Positives = 358/453 (79%)
Frame = +1
Query: 4 GCSLLESLSLMFDVSLVLRYSFARLWLVASTHLTTLEIGYIPSVMVTESXXXXXXXXXXX 183
GC+ LE L LMFDV L LR+ FA++W +AS LT+LEIG + SVMVTE
Sbjct: 160 GCTQLEELILMFDVPLFLRHKFAQVWALASEKLTSLEIGCVSSVMVTELLSPSLGHHRSP 219
Query: 184 XXXXXXXIPSIQKLCLSVDYITDNMVGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGL 363
+P IQKLCLSVDYITD MV TIS L++L HLDLRDAP++EP+ A+DLTNSGL
Sbjct: 220 NHVRPPILPGIQKLCLSVDYITDTMVSTISNVLMSLTHLDLRDAPLIEPSSAYDLTNSGL 279
Query: 364 QQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFR 543
QQINQ GKLK LSLVRSQE+L TYF+RVNDLG+LLMADKC+NMESICLGGFCRVTDTGF+
Sbjct: 280 QQINQHGKLKHLSLVRSQEFLITYFRRVNDLGMLLMADKCANMESICLGGFCRVTDTGFK 339
Query: 544 AILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDL 723
ILH CSSL KL++ +GT LTDLVFHDISATSLSL +VSLRWCNLLTN A+ L N L
Sbjct: 340 TILHSCSSLYKLRVSYGTHLTDLVFHDISATSLSLTHVSLRWCNLLTNHAIKNLVSNTCL 399
Query: 724 RVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCR 903
++LDLR C+++GD AL++I +L +L +LLLDGSDISD GL YL + V+ SLV+LS+R C+
Sbjct: 400 KILDLRDCKHLGDGALRSISTLPELKILLLDGSDISDFGLSYL-RGVINSLVSLSVRGCK 458
Query: 904 RLTDKCISAIFDGTSGKALQSLDLSNIPNLTDNVILLLAKSRVPISELRLRECPRISDMS 1083
RLTDKCISA+F+G+S LQ LDLSN+PNL+DN +L LAK RVPISELR+R+CP I D S
Sbjct: 459 RLTDKCISALFEGSSKLELQQLDLSNLPNLSDNGVLTLAKCRVPISELRMRQCPLIGDAS 518
Query: 1084 VMALASMQVEYGGWHGSRLCLLDLYGCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLV 1263
VMALASMQV+ WHG RL LLDLY C GIT L+F W KKPYFPRLRW G+TGS++RD+V
Sbjct: 519 VMALASMQVDEDRWHGCRLRLLDLYNCGGITQLSFWWLKKPYFPRLRWLGVTGSVSRDIV 578
Query: 1264 DALARSRPFLHMACRGEELGTRYGDSLDGLERH 1362
DALAR+RPFL +AC EELG+ D+ GL H
Sbjct: 579 DALARNRPFLRVACHAEELGSNQWDNSHGLYMH 611
>ref|XP_002312937.1| f-box family protein [Populus trichocarpa]
gi|222849345|gb|EEE86892.1| f-box family protein [Populus
trichocarpa]
Length = 644
Score = 594 bits (1532), Expect = e-167
Identities = 304/453 (67%), Positives = 357/453 (78%)
Frame = +1
Query: 4 GCSLLESLSLMFDVSLVLRYSFARLWLVASTHLTTLEIGYIPSVMVTESXXXXXXXXXXX 183
GC+ LE+L LMFDVSL LR++FA +W + S LT+LEIGY+ SVMVTE
Sbjct: 154 GCTRLEALILMFDVSLFLRHNFALVWALVSEKLTSLEIGYVSSVMVTELVGPSLGPHQSP 213
Query: 184 XXXXXXXIPSIQKLCLSVDYITDNMVGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGL 363
+P IQKLCLSVDYITD MV TISK L++L HLDLRDAP++EPT FDLTNSGL
Sbjct: 214 NHVRPSILPGIQKLCLSVDYITDTMVSTISKGLMSLTHLDLRDAPLIEPTITFDLTNSGL 273
Query: 364 QQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFR 543
QQINQ GKLK LSLVRSQE+ TYF+RVNDLG+LLMADKC NMESICLGGFCRVTDTGF+
Sbjct: 274 QQINQHGKLKHLSLVRSQEFAITYFRRVNDLGMLLMADKCENMESICLGGFCRVTDTGFK 333
Query: 544 AILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDL 723
ILH CSSL KL++ +G LTDLVFHDISATSLSLI+VSLRWCNLLTN A+ L N L
Sbjct: 334 TILHSCSSLYKLQVSYGIHLTDLVFHDISATSLSLIHVSLRWCNLLTNHAIKNLVLNTRL 393
Query: 724 RVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCR 903
RVLDLR C++ GDEAL+AI +L +L +LLLDGS+ISD GL YL + ++ SLV+LS+R C+
Sbjct: 394 RVLDLRDCKHFGDEALRAISALLELKILLLDGSNISDFGLSYL-RGIINSLVSLSVRGCK 452
Query: 904 RLTDKCISAIFDGTSGKALQSLDLSNIPNLTDNVILLLAKSRVPISELRLRECPRISDMS 1083
RLTDKCISA+F+G+S LQ LDLSN+PNL+DN +L LAK RVPISELR+R+CP I D S
Sbjct: 453 RLTDKCISALFEGSSKLKLQQLDLSNLPNLSDNGVLALAKCRVPISELRMRQCPLIGDTS 512
Query: 1084 VMALASMQVEYGGWHGSRLCLLDLYGCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLV 1263
VMALASM+V+ HG L LLDLY C GIT L+FRW KKPYFPRLR G+TGS +RD++
Sbjct: 513 VMALASMRVDEDRLHGCSLRLLDLYNCGGITQLSFRWLKKPYFPRLRCLGVTGSASRDII 572
Query: 1264 DALARSRPFLHMACRGEELGTRYGDSLDGLERH 1362
DALARSRPFLH+AC EELG+ D+L GL H
Sbjct: 573 DALARSRPFLHVACHAEELGSNQWDNLHGLYMH 605
>ref|XP_003555849.1| PREDICTED: F-box/LRR-repeat protein 10-like [Glycine max]
Length = 637
Score = 593 bits (1528), Expect = e-167
Identities = 306/453 (67%), Positives = 358/453 (79%)
Frame = +1
Query: 4 GCSLLESLSLMFDVSLVLRYSFARLWLVASTHLTTLEIGYIPSVMVTESXXXXXXXXXXX 183
GCS LE+L LMFDVSL LR++FAR+W AS LT+LEIGYI SV VTE
Sbjct: 151 GCSHLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSQLPS 210
Query: 184 XXXXXXXIPSIQKLCLSVDYITDNMVGTISKCLVNLIHLDLRDAPVLEPTGAFDLTNSGL 363
+PSIQKLCL+VDYITD MVGTISK L+ L HLDL+DAP++EP FDLTN+GL
Sbjct: 211 NPAQPSILPSIQKLCLNVDYITDAMVGTISKGLMLLTHLDLQDAPLIEPRITFDLTNAGL 270
Query: 364 QQINQSGKLKLLSLVRSQEYLHTYFKRVNDLGLLLMADKCSNMESICLGGFCRVTDTGFR 543
QQINQ G+LK LSLVRSQE+ TYF+RVNDLGLLLMADKC+NMESICLGGFCRVTDTGF+
Sbjct: 271 QQINQLGRLKHLSLVRSQEFQITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFK 330
Query: 544 AILHQCSSLQKLKLCHGTQLTDLVFHDISATSLSLINVSLRWCNLLTNQAVVRLAYNMDL 723
ILH C+ L KLK+ HGT LTDLVFHDISATSL+L +VSLR CNLLTN AV+ LA N L
Sbjct: 331 TILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKVL 390
Query: 724 RVLDLRVCRNIGDEALKAIGSLRKLMVLLLDGSDISDTGLLYLGQRVMRSLVTLSIRSCR 903
++LDLR CR++GDEAL+AIG+L +L +LLLDGSDI+D GLLYL V+ SL LS+R C+
Sbjct: 391 KILDLRDCRSLGDEALQAIGTLPRLKILLLDGSDITDAGLLYLRPSVISSLYALSLRGCK 450
Query: 904 RLTDKCISAIFDGTSGKALQSLDLSNIPNLTDNVILLLAKSRVPISELRLRECPRISDMS 1083
RLTDKCI+A+F+G L+ LDLSN+PNL+DN +LLLAKSR+P ELR+R+CP I D S
Sbjct: 451 RLTDKCITALFNGCCVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLIGDTS 510
Query: 1084 VMALASMQVEYGGWHGSRLCLLDLYGCKGITPLAFRWFKKPYFPRLRWFGLTGSLNRDLV 1263
VMALASM V+ HGS L LLDL+ C GITPLAFRW KKPYFPRL+W G+TGS+NRD+V
Sbjct: 511 VMALASMLVDEAK-HGSSLRLLDLFNCGGITPLAFRWLKKPYFPRLKWLGVTGSVNRDMV 569
Query: 1264 DALARSRPFLHMACRGEELGTRYGDSLDGLERH 1362
DALARSRPFLH+AC GEELG + DGL H
Sbjct: 570 DALARSRPFLHVACHGEELGADPYGTSDGLYTH 602