BLASTX nr result
ID: Coptis24_contig00009880
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00009880 (569 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529504.1| coatomer alpha subunit, putative [Ricinus co... 333 1e-89 ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2... 332 2e-89 ref|XP_004165122.1| PREDICTED: coatomer subunit alpha-1-like [Cu... 332 3e-89 ref|XP_004150060.1| PREDICTED: LOW QUALITY PROTEIN: coatomer sub... 332 3e-89 ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, pa... 331 4e-89 >ref|XP_002529504.1| coatomer alpha subunit, putative [Ricinus communis] gi|223531020|gb|EEF32873.1| coatomer alpha subunit, putative [Ricinus communis] Length = 1217 Score = 333 bits (854), Expect = 1e-89 Identities = 153/171 (89%), Positives = 162/171 (94%) Frame = -1 Query: 515 GDDYSIKVWNYKLHRCLFTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 336 GDDY IKVWNYK+HRCLFTLLGHL+YIR VQFHHE PWI SA DDQTIRIWNWQSRTCI+ Sbjct: 70 GDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129 Query: 335 VLTGHVHYVMCAVFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPADDSLRLSEMSSDMF 156 VLTGH HYVMCA FHPKEDLVVSASLDQT+RVWDIGALRKKTVSPADD LRLS+M++D+F Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNTDIF 189 Query: 155 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQIKLWRMNDMKAWE 3 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQ+KLWRMND KAWE Sbjct: 190 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -1 Query: 464 FTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTC--IAVLTGHVHYVMCAVFH 291 + L GH + FH P I S DD+ +++W + L GH++ V C +FH Sbjct: 198 YVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDALRGHMNNVSCVMFH 257 Query: 290 PKEDLVVSASLDQTIRVWDI 231 K+D++VS S D++IRVWD+ Sbjct: 258 AKQDIIVSNSEDKSIRVWDV 277 >ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1| predicted protein [Populus trichocarpa] Length = 1218 Score = 332 bits (852), Expect = 2e-89 Identities = 152/171 (88%), Positives = 162/171 (94%) Frame = -1 Query: 515 GDDYSIKVWNYKLHRCLFTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 336 GDDY IKVWNYKLHRCLFTLLGHL+YIR VQFHHE PWI SA DDQTIRIWNWQSRTCI+ Sbjct: 70 GDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129 Query: 335 VLTGHVHYVMCAVFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPADDSLRLSEMSSDMF 156 VLTGH HYVMCA FHPKEDLVVSASLDQT+RVWDIGALRKKTVSPADD +RL++M+SD+F Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLF 189 Query: 155 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQIKLWRMNDMKAWE 3 GGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQ+KLWRMND KAWE Sbjct: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240 Score = 63.2 bits (152), Expect = 3e-08 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -1 Query: 464 FTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTC--IAVLTGHVHYVMCAVFH 291 + L GH + FH P I S DD+ +++W + L GH++ V C +FH Sbjct: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFH 257 Query: 290 PKEDLVVSASLDQTIRVWDI 231 K+D++VS S D++IRVWD+ Sbjct: 258 AKQDIIVSNSEDKSIRVWDV 277 >ref|XP_004165122.1| PREDICTED: coatomer subunit alpha-1-like [Cucumis sativus] Length = 1219 Score = 332 bits (851), Expect = 3e-89 Identities = 152/171 (88%), Positives = 161/171 (94%) Frame = -1 Query: 515 GDDYSIKVWNYKLHRCLFTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 336 GDDY IKVWNYK HRCLFTLLGHL+YIR VQFHHE PWI SA DDQTIRIWNWQSRTCI+ Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129 Query: 335 VLTGHVHYVMCAVFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPADDSLRLSEMSSDMF 156 VLTGH HYVMCA FHPKEDLVVSASLDQT+RVWDIGALRKKTVSPADD LRLS+M++D+F Sbjct: 130 VLTGHNHYVMCAAFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLRLSQMNADLF 189 Query: 155 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQIKLWRMNDMKAWE 3 GGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQ+KLWRMND KAWE Sbjct: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240 Score = 61.6 bits (148), Expect = 9e-08 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -1 Query: 464 FTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTC--IAVLTGHVHYVMCAVFH 291 + L GH + FH P I S DD+ +++W + L GH++ V C +FH Sbjct: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFH 257 Query: 290 PKEDLVVSASLDQTIRVWD 234 K+D++VS S D++IR+WD Sbjct: 258 AKQDIIVSNSEDKSIRIWD 276 >ref|XP_004150060.1| PREDICTED: LOW QUALITY PROTEIN: coatomer subunit alpha-1-like [Cucumis sativus] Length = 1183 Score = 332 bits (851), Expect = 3e-89 Identities = 152/171 (88%), Positives = 161/171 (94%) Frame = -1 Query: 515 GDDYSIKVWNYKLHRCLFTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 336 GDDY IKVWNYK HRCLFTLLGHL+YIR VQFHHE PWI SA DDQTIRIWNWQSRTCI+ Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129 Query: 335 VLTGHVHYVMCAVFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPADDSLRLSEMSSDMF 156 VLTGH HYVMCA FHPKEDLVVSASLDQT+RVWDIGALRKKTVSPADD LRLS+M++D+F Sbjct: 130 VLTGHNHYVMCAAFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLRLSQMNADLF 189 Query: 155 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQIKLWRMNDMKAWE 3 GGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQ+KLWRMND KAWE Sbjct: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240 Score = 61.6 bits (148), Expect = 9e-08 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -1 Query: 464 FTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTC--IAVLTGHVHYVMCAVFH 291 + L GH + FH P I S DD+ +++W + L GH++ V C +FH Sbjct: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFH 257 Query: 290 PKEDLVVSASLDQTIRVWD 234 K+D++VS S D++IR+WD Sbjct: 258 AKQDIIVSNSEDKSIRIWD 276 >ref|XP_004165124.1| PREDICTED: coatomer subunit alpha-1-like, partial [Cucumis sativus] Length = 855 Score = 331 bits (849), Expect = 4e-89 Identities = 152/171 (88%), Positives = 161/171 (94%) Frame = -1 Query: 515 GDDYSIKVWNYKLHRCLFTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTCIA 336 GDDY IKVWNYK HRCLFTLLGHL+YIR VQFHHE PWI SA DDQTIRIWNWQSRTCI+ Sbjct: 70 GDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCIS 129 Query: 335 VLTGHVHYVMCAVFHPKEDLVVSASLDQTIRVWDIGALRKKTVSPADDSLRLSEMSSDMF 156 VLTGH HYVMCA FHPKEDLVVSASLDQT+RVWDIGALRKKTVSPADD LRLS+M++D+F Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILRLSQMNADLF 189 Query: 155 GGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQIKLWRMNDMKAWE 3 GGVDAVVKYVLEGHDRGVNWA+FHPTLPLIVSGADDRQ+KLWRMND KAWE Sbjct: 190 GGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE 240 Score = 61.6 bits (148), Expect = 9e-08 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -1 Query: 464 FTLLGHLEYIRAVQFHHESPWIRSARDDQTIRIWNWQSRTC--IAVLTGHVHYVMCAVFH 291 + L GH + FH P I S DD+ +++W + L GH++ V C +FH Sbjct: 198 YVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFH 257 Query: 290 PKEDLVVSASLDQTIRVWD 234 K+D++VS S D++IR+WD Sbjct: 258 AKQDIIVSNSEDKSIRIWD 276