BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009872
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   195   4e-48
ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...   189   3e-46
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
gb|ABK92468.1| unknown [Populus trichocarpa]                          188   3e-46
ref|XP_002529804.1| eukaryotic translation initiation factor 3 s...   186   2e-45

>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score =  195 bits (495), Expect = 4e-48
 Identities = 101/119 (84%), Positives = 104/119 (87%)
 Frame = +1

Query: 1   RSNQGVLALKALKLSDAFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 180
           RSNQGVLALKALKLSD+FMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM
Sbjct: 141 RSNQGVLALKALKLSDSFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 200

Query: 181 TXXXXXXXXXXXXXXXLEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQK 357
           T               LEADTPVTQCDYDRLQLSTNP+MERN+EFLIECMDDLSMEQQK
Sbjct: 201 T--------------ELEADTPVTQCDYDRLQLSTNPYMERNLEFLIECMDDLSMEQQK 245


>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Cucumis sativus]
           gi|449521699|ref|XP_004167867.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit H-like [Cucumis
           sativus]
          Length = 337

 Score =  189 bits (479), Expect = 3e-46
 Identities = 98/119 (82%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RSNQGVLALKALKLSDAFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 180
           RSNQGVLALKALKLSD+FMELYR N+FTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM
Sbjct: 141 RSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 200

Query: 181 TXXXXXXXXXXXXXXXLEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQK 357
           T               LE+D+PVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS+EQQK
Sbjct: 201 T--------------ELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQK 245


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/119 (81%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RSNQGVLALKALKLSDAFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 180
           R+NQGVLALKALKLSD+FM+LYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM
Sbjct: 137 RANQGVLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 196

Query: 181 TXXXXXXXXXXXXXXXLEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQK 357
           T               LE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQK
Sbjct: 197 T--------------ELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQK 241


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/119 (81%), Positives = 103/119 (86%)
 Frame = +1

Query: 1   RSNQGVLALKALKLSDAFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 180
           R+NQGVLALKALKLSD+FM+LYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM
Sbjct: 145 RANQGVLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 204

Query: 181 TXXXXXXXXXXXXXXXLEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQK 357
           T               LE DTPVTQCDYDRLQLST+P++ERNVEFLIECMDDLSMEQQK
Sbjct: 205 T--------------ELEDDTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQK 249


>ref|XP_002529804.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223530715|gb|EEF32586.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 341

 Score =  186 bits (471), Expect = 2e-45
 Identities = 95/119 (79%), Positives = 102/119 (85%)
 Frame = +1

Query: 1   RSNQGVLALKALKLSDAFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFM 180
           RS QGVLALKALKLSDAFMELYRNNNFTGEKLRE+NLSWVDIFEEIPIKVSNSALISAFM
Sbjct: 144 RSEQGVLALKALKLSDAFMELYRNNNFTGEKLRERNLSWVDIFEEIPIKVSNSALISAFM 203

Query: 181 TXXXXXXXXXXXXXXXLEADTPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSMEQQK 357
           +               LE D+PVTQCDYDRLQLSTNPF+ERNVEFL+ECMD+LS+EQQK
Sbjct: 204 S--------------ELETDSPVTQCDYDRLQLSTNPFLERNVEFLVECMDELSIEQQK 248