BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009848
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   261   9e-68
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   258   6e-67
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...   242   4e-62
ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arab...   241   7e-62
ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thalia...   236   3e-60

>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  261 bits (666), Expect = 9e-68
 Identities = 119/188 (63%), Positives = 146/188 (77%)
 Frame = -3

Query: 604 HLEKLHEFWYTLQNIDRNLWVVHQRQPSRATSFRQINIGNDCCIVLSVSEHSPSSLPECR 425
           HLEKL EFW TL++ID +L VV   + S A SFRQI+IGNDC I+L ++   P SLPECR
Sbjct: 70  HLEKLQEFWSTLEDIDNSLCVVDIHKSSHAISFRQIDIGNDCFIMLFINTKDPRSLPECR 129

Query: 424 FLGPNSLVDSLRKTWRRNSKRWKKDALFHENLANILETSLPRPPCLQNLQHQVECGICYA 245
           FLG   +  SLRK W+RN K+W +D  F ENL +ILET LP+PP +Q    Q+ECGICYA
Sbjct: 130 FLGSGPVAHSLRKRWQRNCKQWMQDKTFLENLLSILETELPKPPDVQKNDQQIECGICYA 189

Query: 244 QYLPVDNELGAKSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCS 65
           QYLP+D+ELG +SG+  DY CDN +C+RAFHS+CLGDWL SITTTR+S++VLFGNCPYCS
Sbjct: 190 QYLPIDDELGPRSGTGTDYTCDNSNCNRAFHSICLGDWLRSITTTRQSYNVLFGNCPYCS 249

Query: 64  GPVAVNVN 41
            PVAV +N
Sbjct: 250 EPVAVKIN 257


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  258 bits (659), Expect = 6e-67
 Identities = 120/191 (62%), Positives = 148/191 (77%)
 Frame = -3

Query: 604 HLEKLHEFWYTLQNIDRNLWVVHQRQPSRATSFRQINIGNDCCIVLSVSEHSPSSLPECR 425
           HLE+L EFW TL++ID +L V ++++ SRAT+ RQI+IGNDC I+LS++   P SLPECR
Sbjct: 77  HLEELQEFWSTLEDIDHSLCVTNKKKLSRATTCRQIDIGNDCSIMLSINARDPRSLPECR 136

Query: 424 FLGPNSLVDSLRKTWRRNSKRWKKDALFHENLANILETSLPRPPCLQNLQHQVECGICYA 245
           F+G   +V+ +RK W RN+KRW KD    ENLA ILET LPRP  +     QVECGICYA
Sbjct: 137 FMGSGPVVNPVRKLWLRNNKRWMKDKTLPENLAFILETELPRPSHVLENDQQVECGICYA 196

Query: 244 QYLPVDNELGAKSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYCS 65
           QYLP+D ELG++SG+  D+ CDN SC RAFH+VCL DWL SITTTR+SFDVLFGNCPYCS
Sbjct: 197 QYLPIDEELGSRSGAGTDHTCDNTSCGRAFHTVCLVDWLRSITTTRQSFDVLFGNCPYCS 256

Query: 64  GPVAVNVNTKE 32
            PVAV +N K+
Sbjct: 257 EPVAVKLNDKK 267


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score =  242 bits (617), Expect = 4e-62
 Identities = 109/188 (57%), Positives = 136/188 (72%), Gaps = 1/188 (0%)
 Frame = -3

Query: 604 HLEKLHEFWYTLQNIDRNLWVVHQRQPSRATSFRQINIGNDCCIVLSVSEHSPSSLPECR 425
           HL+ L  +W T+ +ID+ LWVV   +PS A S R+I +G+DC I+L V  H PSSLPECR
Sbjct: 121 HLKNLQNYWCTMDDIDKALWVVDPTKPSYAMSHRRIALGDDCYILLHVDAHKPSSLPECR 180

Query: 424 FLGPNSLVDSLRKTWRRNSKRWKKDALFHENLANILETSLPRPPCLQ-NLQHQVECGICY 248
           FLG +  ++ L K WR+N KRW  D  FHENL+ +L+  LP+PP +      Q +CGICY
Sbjct: 181 FLGTDGKLERLIKNWRKNRKRWTADKKFHENLSTVLDFELPQPPSVSIKDDQQADCGICY 240

Query: 247 AQYLPVDNELGAKSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGNCPYC 68
           A +LP+D+ELG  SG   DY C+N SC RAFHSVCL DWLC+ITTTR+SFDVLFGNCPYC
Sbjct: 241 ATHLPIDDELGTDSGCATDYTCENSSCDRAFHSVCLRDWLCTITTTRQSFDVLFGNCPYC 300

Query: 67  SGPVAVNV 44
           S PVAV +
Sbjct: 301 SEPVAVKI 308


>ref|XP_002866688.1| hypothetical protein ARALYDRAFT_496810 [Arabidopsis lyrata subsp.
           lyrata] gi|297312523|gb|EFH42947.1| hypothetical protein
           ARALYDRAFT_496810 [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  241 bits (615), Expect = 7e-62
 Identities = 113/193 (58%), Positives = 145/193 (75%), Gaps = 5/193 (2%)
 Frame = -3

Query: 604 HLEKLHEFWYTLQNIDRNLWVVHQRQPSRATSFRQINIGNDCCIVLSVSEHSPSSLPECR 425
           HL+ L EFW  L +ID++L +V  +QPSRA++ R+I+ GNDC +++ +    P SLPECR
Sbjct: 106 HLDYLQEFWSVLDDIDKSLCIVDAKQPSRASAIRRIHAGNDCILIVHIDFKDPKSLPECR 165

Query: 424 FLGP---NSLVDSLRKTWRRNSKRWKKDALFHENLANILETSLPRPPCLQNL--QHQVEC 260
           F+GP    + ++SL   WRRNSK+W K+  F ENL  IL T LP+P  LQ    Q QVEC
Sbjct: 166 FIGPVPPATHMNSLHMLWRRNSKKWSKERPFPENLECILGTELPKPLGLQEEENQQQVEC 225

Query: 259 GICYAQYLPVDNELGAKSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGN 80
           GICYAQ+LP D ELGA+SG++ DY C+NISC+++FHS+CL DWL SITTTR+SFDVLFGN
Sbjct: 226 GICYAQFLPTDEELGARSGTQTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGN 285

Query: 79  CPYCSGPVAVNVN 41
           CPYCS PVAV +N
Sbjct: 286 CPYCSDPVAVKIN 298


>ref|NP_001032152.1| zinc ion binding protein [Arabidopsis thaliana]
           gi|222424329|dbj|BAH20121.1| AT5G65740 [Arabidopsis
           thaliana] gi|332010715|gb|AED98098.1| zinc ion binding
           protein [Arabidopsis thaliana]
          Length = 300

 Score =  236 bits (601), Expect = 3e-60
 Identities = 113/195 (57%), Positives = 143/195 (73%), Gaps = 5/195 (2%)
 Frame = -3

Query: 604 HLEKLHEFWYTLQNIDRNLWVVHQRQPSRATSFRQINIGNDCCIVLSVSEHSPSSLPECR 425
           HL+ L EFW  L NID++L VV  +QP+RA++ R+I+ GNDC I++ +    P SLPE R
Sbjct: 106 HLDYLQEFWSVLDNIDKSLCVVDVKQPARASAIRRIDAGNDCIIIVHIDFKDPKSLPESR 165

Query: 424 FLGP---NSLVDSLRKTWRRNSKRWKKDALFHENLANILETSLPRPPCLQ--NLQHQVEC 260
           F+GP    + +++L   WRRN KRW  +  F ENL  IL T LP+P  LQ  + Q QVEC
Sbjct: 166 FIGPVPSATHMNNLHMLWRRNCKRWSNERSFPENLECILGTELPKPLGLQVEDDQQQVEC 225

Query: 259 GICYAQYLPVDNELGAKSGSRPDYVCDNISCSRAFHSVCLGDWLCSITTTRRSFDVLFGN 80
           GICYAQ+LP D ELGA+SG+R DY C+NISC+++FHS+CL DWL SITTTR+SFDVLFGN
Sbjct: 226 GICYAQFLPTDEELGARSGTRTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGN 285

Query: 79  CPYCSGPVAVNVNTK 35
           CPYCS PVAV  + K
Sbjct: 286 CPYCSDPVAVKTSNK 300