BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009845
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569528.1| PREDICTED: splicing factor U2af small subuni...   215   3e-54
dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]    215   3e-54
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   215   3e-54
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   214   5e-54
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   214   8e-54

>ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
           [Brachypodium distachyon]
           gi|357135866|ref|XP_003569529.1| PREDICTED: splicing
           factor U2af small subunit B-like isoform 2 [Brachypodium
           distachyon] gi|357135868|ref|XP_003569530.1| PREDICTED:
           splicing factor U2af small subunit B-like isoform 3
           [Brachypodium distachyon]
          Length = 281

 Score =  215 bits (548), Expect = 3e-54
 Identities = 97/125 (77%), Positives = 110/125 (88%)
 Frame = +1

Query: 49  MARHLASSYGSEVDRVNCPFFIKVGACRHGDGCARFHNHPTSSPTLLLSNMYQRLDMINP 228
           MA HLAS +G+E DRVNCPF+ K+GACRHGD C+R HN PT SPT++L NMYQR DMI P
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60

Query: 229 GVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVCDNLNDHMVGNVYVQFKDED 408
           GVD  GQPID RKMQEHFE+FYEDIFEELSKFG+IE LNVCDNL+DHM+GNVYVQF++ED
Sbjct: 61  GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120

Query: 409 QAAAA 423
           QAAAA
Sbjct: 121 QAAAA 125


>dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 281

 Score =  215 bits (548), Expect = 3e-54
 Identities = 97/125 (77%), Positives = 110/125 (88%)
 Frame = +1

Query: 49  MARHLASSYGSEVDRVNCPFFIKVGACRHGDGCARFHNHPTSSPTLLLSNMYQRLDMINP 228
           MA HLAS +G+E DRVNCPF+ K+GACRHGD C+R HN PT SPT++L NMYQR DMI P
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60

Query: 229 GVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVCDNLNDHMVGNVYVQFKDED 408
           GVD  GQPID RKMQEHFE+FYEDIFEELSKFG+IE LNVCDNL+DHM+GNVYVQF++ED
Sbjct: 61  GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120

Query: 409 QAAAA 423
           QAAAA
Sbjct: 121 QAAAA 125


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  215 bits (547), Expect = 3e-54
 Identities = 98/125 (78%), Positives = 109/125 (87%)
 Frame = +1

Query: 49  MARHLASSYGSEVDRVNCPFFIKVGACRHGDGCARFHNHPTSSPTLLLSNMYQRLDMINP 228
           MA HLAS +G+E DRVNCPF+ K+GACRHGD C+R HN PT SPTLLLSNMYQR DMI P
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 229 GVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVCDNLNDHMVGNVYVQFKDED 408
           GVD  GQPID RK+QEHFE+FYEDIFEEL KFG+IE LNVCDNL DHM+GNVYVQF++ED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 409 QAAAA 423
           QAAAA
Sbjct: 121 QAAAA 125


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  214 bits (546), Expect = 5e-54
 Identities = 98/125 (78%), Positives = 109/125 (87%)
 Frame = +1

Query: 49  MARHLASSYGSEVDRVNCPFFIKVGACRHGDGCARFHNHPTSSPTLLLSNMYQRLDMINP 228
           MA HLAS +G+E DRVNCPF+ K+GACRHGD C+R HN PT SPTLLLSNMYQR DMI P
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 229 GVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVCDNLNDHMVGNVYVQFKDED 408
           GVD  GQPID RK+QEHFE+FYEDIFEEL KFG+IE LNVCDNL DHM+GNVYVQFK+E+
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 409 QAAAA 423
           QAAAA
Sbjct: 121 QAAAA 125


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  214 bits (544), Expect = 8e-54
 Identities = 97/125 (77%), Positives = 109/125 (87%)
 Frame = +1

Query: 49  MARHLASSYGSEVDRVNCPFFIKVGACRHGDGCARFHNHPTSSPTLLLSNMYQRLDMINP 228
           MA HLAS +G+E DRVNCPF+ K+GACRHGD C+R HN PT SPTLLLSNMYQR DMI P
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 229 GVDVHGQPIDARKMQEHFEEFYEDIFEELSKFGQIERLNVCDNLNDHMVGNVYVQFKDED 408
           GVD  GQPID RK+QEHFE+FYEDI+EEL KFG+IE LNVCDNL DHM+GNVYVQF++ED
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 409 QAAAA 423
           QAAAA
Sbjct: 121 QAAAA 125