BLASTX nr result

ID: Coptis24_contig00009838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009838
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321484.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_002318542.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
emb|CBI15484.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002276900.1| PREDICTED: uncharacterized protein LOC100259...   159   2e-37
ref|XP_003533359.1| PREDICTED: uncharacterized protein LOC100803...   157   8e-37

>ref|XP_002321484.1| predicted protein [Populus trichocarpa] gi|222868480|gb|EEF05611.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/102 (80%), Positives = 89/102 (87%)
 Frame = +1

Query: 1   DGVASIGDLTFTDNSSWIRSRTFRLGARVAPESTYNGVRIREAITEAFVVRDHRGELYKK 180
           DG A IG++ FTDNSSWIRSR FRLGARVAP S Y GV+IREAITEAFVV+DHRGELYKK
Sbjct: 157 DGFAPIGEIEFTDNSSWIRSRKFRLGARVAPGS-YQGVKIREAITEAFVVKDHRGELYKK 215

Query: 181 HHPPSLSDEVWRLEKIGKEGVFHRKLNAENVNSVQDFLKLWV 306
           HHPP L DEVWRLEKIGK+G FHRKL AE +N+VQDFLKL V
Sbjct: 216 HHPPMLQDEVWRLEKIGKDGAFHRKLTAEGINTVQDFLKLSV 257


>ref|XP_002318542.1| predicted protein [Populus trichocarpa] gi|222859215|gb|EEE96762.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/102 (76%), Positives = 87/102 (85%)
 Frame = +1

Query: 1   DGVASIGDLTFTDNSSWIRSRTFRLGARVAPESTYNGVRIREAITEAFVVRDHRGELYKK 180
           DG A IG++ FTDNSSW+RSR FRLGARV PES Y GVRIREAITEAFVV+DHRGELYKK
Sbjct: 185 DGFAPIGEIEFTDNSSWVRSRKFRLGARVVPES-YQGVRIREAITEAFVVKDHRGELYKK 243

Query: 181 HHPPSLSDEVWRLEKIGKEGVFHRKLNAENVNSVQDFLKLWV 306
           HHPP L DEVWRLEKIGK+G FH+KL    +++VQDFLKL V
Sbjct: 244 HHPPMLQDEVWRLEKIGKDGAFHKKLATARIHTVQDFLKLSV 285


>emb|CBI15484.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = +1

Query: 1   DGVASIGDLTFTDNSSWIRSRTFRLGARVAPESTYNGVRIREAITEAFVVRDHRGELYKK 180
           DG+A IGD+ FTDNSSWIRSR FRLGARV P S ++ V IREAITEAF V+DHRGELYKK
Sbjct: 182 DGLAMIGDIEFTDNSSWIRSRKFRLGARVVPGSRHD-VSIREAITEAFAVKDHRGELYKK 240

Query: 181 HHPPSLSDEVWRLEKIGKEGVFHRKLNAENVNSVQDFLKL 300
           HHPP L+DEVWRLEKIGK+G FH+KL +EN+N+VQD LKL
Sbjct: 241 HHPPMLNDEVWRLEKIGKDGAFHKKLASENINTVQDLLKL 280


>ref|XP_002276900.1| PREDICTED: uncharacterized protein LOC100259493 [Vitis vinifera]
          Length = 487

 Score =  159 bits (402), Expect = 2e-37
 Identities = 76/100 (76%), Positives = 87/100 (87%)
 Frame = +1

Query: 1   DGVASIGDLTFTDNSSWIRSRTFRLGARVAPESTYNGVRIREAITEAFVVRDHRGELYKK 180
           DG+A IGD+ FTDNSSWIRSR FRLGARV P S ++ V IREAITEAF V+DHRGELYKK
Sbjct: 200 DGLAMIGDIEFTDNSSWIRSRKFRLGARVVPGSRHD-VSIREAITEAFAVKDHRGELYKK 258

Query: 181 HHPPSLSDEVWRLEKIGKEGVFHRKLNAENVNSVQDFLKL 300
           HHPP L+DEVWRLEKIGK+G FH+KL +EN+N+VQD LKL
Sbjct: 259 HHPPMLNDEVWRLEKIGKDGAFHKKLASENINTVQDLLKL 298


>ref|XP_003533359.1| PREDICTED: uncharacterized protein LOC100803213 [Glycine max]
          Length = 489

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/102 (71%), Positives = 84/102 (82%)
 Frame = +1

Query: 1   DGVASIGDLTFTDNSSWIRSRTFRLGARVAPESTYNGVRIREAITEAFVVRDHRGELYKK 180
           DG+A  GD+ FTDNSSWIR R FR+  RV P +   GVRIREA+TEAFVV+DHRGELYKK
Sbjct: 188 DGIAPTGDIEFTDNSSWIRCRKFRVAVRVVPGTNPGGVRIREAMTEAFVVKDHRGELYKK 247

Query: 181 HHPPSLSDEVWRLEKIGKEGVFHRKLNAENVNSVQDFLKLWV 306
           HHPP L DEVWRLEKIGK+G FHRKL++E + +VQDFLKL V
Sbjct: 248 HHPPMLHDEVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAV 289


Top