BLASTX nr result

ID: Coptis24_contig00009837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009837
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinif...   156   2e-36
emb|CBI38092.3| unnamed protein product [Vitis vinifera]              156   2e-36
emb|CAN82230.1| hypothetical protein VITISV_033343 [Vitis vinifera]   155   6e-36
gb|AFK46064.1| unknown [Lotus japonicus]                              147   9e-34
ref|XP_002524004.1| signal transducer, putative [Ricinus communi...   147   1e-33

>ref|XP_002265726.2| PREDICTED: protein SCAI homolog [Vitis vinifera]
          Length = 638

 Score =  156 bits (395), Expect = 2e-36
 Identities = 91/179 (50%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   WKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSFDGKRSLKLRDAVLCSYH 180
           WKLVVQEIVRFL  DT FMN RPLR+SLVLD S D +  +    GKR+L+LRDA+L SYH
Sbjct: 180 WKLVVQEIVRFLKADTTFMNTRPLRYSLVLDPSPDCLPQVSISIGKRNLRLRDAILSSYH 239

Query: 181 HNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTELTLDTFMMLQSLEWEPSG 360
           HN V                                  KF+ELTLDTF MLQ LEWEPSG
Sbjct: 240 HNEV----------------------------------KFSELTLDTFRMLQCLEWEPSG 265

Query: 361 SFYQIT-KXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPRKAILYRPAVPHLIAV 534
           SFYQ                      R+NYS +ITDPTLP NPRKAILYRP++ H IAV
Sbjct: 266 SFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNPRKAILYRPSITHFIAV 324


>emb|CBI38092.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  156 bits (395), Expect = 2e-36
 Identities = 91/179 (50%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   WKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSFDGKRSLKLRDAVLCSYH 180
           WKLVVQEIVRFL  DT FMN RPLR+SLVLD S D +  +    GKR+L+LRDA+L SYH
Sbjct: 180 WKLVVQEIVRFLKADTTFMNTRPLRYSLVLDPSPDCLPQVSISIGKRNLRLRDAILSSYH 239

Query: 181 HNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTELTLDTFMMLQSLEWEPSG 360
           HN V                                  KF+ELTLDTF MLQ LEWEPSG
Sbjct: 240 HNEV----------------------------------KFSELTLDTFRMLQCLEWEPSG 265

Query: 361 SFYQIT-KXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPRKAILYRPAVPHLIAV 534
           SFYQ                      R+NYS +ITDPTLP NPRKAILYRP++ H IAV
Sbjct: 266 SFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNPRKAILYRPSITHFIAV 324


>emb|CAN82230.1| hypothetical protein VITISV_033343 [Vitis vinifera]
          Length = 441

 Score =  155 bits (391), Expect = 6e-36
 Identities = 90/179 (50%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   WKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSFDGKRSLKLRDAVLCSYH 180
           WKLVVQEIVRFL  DT F+N RPLR+SLVLD S D +  +    GKR+L+LRDA+L SYH
Sbjct: 180 WKLVVQEIVRFLKADTTFVNTRPLRYSLVLDPSPDCLPQVSISIGKRNLRLRDAILSSYH 239

Query: 181 HNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTELTLDTFMMLQSLEWEPSG 360
           HN V                                  KF+ELTLDTF MLQ LEWEPSG
Sbjct: 240 HNEV----------------------------------KFSELTLDTFRMLQCLEWEPSG 265

Query: 361 SFYQIT-KXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPRKAILYRPAVPHLIAV 534
           SFYQ                      R+NYS +ITDPTLP NPRKAILYRP++ H IAV
Sbjct: 266 SFYQSGGASLSGMGTKIGQNGSPGPSRINYSHDITDPTLPPNPRKAILYRPSITHFIAV 324


>gb|AFK46064.1| unknown [Lotus japonicus]
          Length = 555

 Score =  147 bits (372), Expect = 9e-34
 Identities = 86/178 (48%), Positives = 99/178 (55%)
 Frame = +1

Query: 1   WKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSFDGKRSLKLRDAVLCSYH 180
           WKLVVQEIVRFL  DTAF N RPLR+SLVLD   D +    +   KRSLKL+DAVL S+H
Sbjct: 174 WKLVVQEIVRFLKADTAFTNIRPLRYSLVLDPHPDTLPQTSAAITKRSLKLQDAVLSSFH 233

Query: 181 HNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTELTLDTFMMLQSLEWEPSG 360
           HN V                                  KF+ELT+DTF MLQ LEWEPSG
Sbjct: 234 HNEV----------------------------------KFSELTIDTFRMLQCLEWEPSG 259

Query: 361 SFYQITKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPRKAILYRPAVPHLIAV 534
           SFYQ +                   R++Y Q+I DPTLP NPRK ILYRP++ H IAV
Sbjct: 260 SFYQAS------GSKPSQNGVTGTTRISYIQDIADPTLPANPRKTILYRPSLTHFIAV 311


>ref|XP_002524004.1| signal transducer, putative [Ricinus communis]
           gi|223536731|gb|EEF38372.1| signal transducer, putative
           [Ricinus communis]
          Length = 761

 Score =  147 bits (371), Expect = 1e-33
 Identities = 84/178 (47%), Positives = 103/178 (57%)
 Frame = +1

Query: 1   WKLVVQEIVRFLNNDTAFMNFRPLRFSLVLDSSTDNIQLLPSFDGKRSLKLRDAVLCSYH 180
           WKLVVQEI+RFL  D+AFMN RPLR+SLVLD   D++  + +   +R+L+LRDA+L SYH
Sbjct: 191 WKLVVQEIIRFLKADSAFMNIRPLRYSLVLDPHPDSLLHVVT---RRNLRLRDAILTSYH 247

Query: 181 HNGVFYR*SCCWVDMVICTCVLGYRILQGTQTGDASCVKFTELTLDTFMMLQSLEWEPSG 360
           HN V                                  KF+ELTLDTF MLQ LEWEPSG
Sbjct: 248 HNEV----------------------------------KFSELTLDTFRMLQCLEWEPSG 273

Query: 361 SFYQITKXXXXXXXXXXXXXXXXXXRVNYSQEITDPTLPTNPRKAILYRPAVPHLIAV 534
           SFYQ                     R+NY+ +ITDPTLP N RKA+LYRP++ HL+AV
Sbjct: 274 SFYQSNSIKYGQNGGPGPS------RINYTHDITDPTLPPNSRKAVLYRPSITHLLAV 325


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