BLASTX nr result

ID: Coptis24_contig00009830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009830
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15
ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...    87   5e-15
emb|CBI26580.3| unnamed protein product [Vitis vinifera]               87   5e-15
ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14
ref|XP_002308536.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13

>ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|222868781|gb|EEF05912.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 9/122 (7%)
 Frame = +1

Query: 109 LKEASLNVNAVNSRGLTALDVLLTVPSESNDIELVEMLRSAGGKRSLDHQEPPMQGQITS 288
           +   SL VNA+N  GLTALD++L  PSE+ D E+VE+LRSAG  R+ D  +  +    TS
Sbjct: 8   VSSGSLEVNAINHSGLTALDMVLIFPSEAGDREIVEILRSAGATRARDIIQSTISNNQTS 67

Query: 289 SIHGTVNQRVDQNTT---------RGGDRVAEMRNGILMMASLTATMTFQAALAPPGGFW 441
           + + +  +R   N           +G D  +E R+ +L++A L AT TFQ  + PPGG W
Sbjct: 68  TDNTSTPERCLSNGNNLIEYFKFKKGRDSPSEARSTLLVIAVLVATATFQVGVNPPGGVW 127

Query: 442 QD 447
           QD
Sbjct: 128 QD 129


>ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At2g01680-like [Vitis vinifera]
          Length = 450

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 16/131 (12%)
 Frame = +1

Query: 103 FLLKEASL------NVNAVNSRGLTALDVLLTVPSESNDIELVEMLRSAGGKRSLDHQEP 264
           FLL +A++       VN +N+ GLTALDVLL  PSE+ D E+ E+L SAG KR+ D   P
Sbjct: 194 FLLGDATIPGSGVTEVNLMNNSGLTALDVLLIFPSEAGDREIKEILHSAGAKRAQDIAFP 253

Query: 265 PMQGQITSSIHGTV---------NQRVDQ-NTTRGGDRVAEMRNGILMMASLTATMTFQA 414
           P   Q  + ++ T          N  V+     RG D   E R+ +L++A L AT T+Q 
Sbjct: 254 PFGTQNHARLNSTTTVETCPMQPNNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQV 313

Query: 415 ALAPPGGFWQD 447
            L+PPGG WQD
Sbjct: 314 GLSPPGGVWQD 324


>emb|CBI26580.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 16/131 (12%)
 Frame = +1

Query: 103 FLLKEASL------NVNAVNSRGLTALDVLLTVPSESNDIELVEMLRSAGGKRSLDHQEP 264
           FLL +A++       VN +N+ GLTALDVLL  PSE+ D E+ E+L SAG KR+ D   P
Sbjct: 82  FLLGDATIPGSGVTEVNLMNNSGLTALDVLLIFPSEAGDREIKEILHSAGAKRAQDIAFP 141

Query: 265 PMQGQITSSIHGTV---------NQRVDQ-NTTRGGDRVAEMRNGILMMASLTATMTFQA 414
           P   Q  + ++ T          N  V+     RG D   E R+ +L++A L AT T+Q 
Sbjct: 142 PFGTQNHARLNSTTTVETCPMQPNNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQV 201

Query: 415 ALAPPGGFWQD 447
            L+PPGG WQD
Sbjct: 202 GLSPPGGVWQD 212


>ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 9/118 (7%)
 Frame = +1

Query: 121 SLNVNAVNSRGLTALDVLLTVPSESNDIELVEMLRSAGGKRSLDHQEPPMQGQITSSIHG 300
           SL VNA+N  G+TALDV+L  PSE+ D E+VE+LRSAG  R+ D     +    TS+ + 
Sbjct: 205 SLEVNAINHTGITALDVILLFPSEAGDREIVEILRSAGAMRARDSVPSTVTNSQTSTDNP 264

Query: 301 TVNQRVDQNT---------TRGGDRVAEMRNGILMMASLTATMTFQAALAPPGGFWQD 447
           +  +R   N           +  D  +E R  +L++A L AT TFQ  + PPGG WQD
Sbjct: 265 STPERCWSNRDNLVEYFKFKKDRDSPSEARGTLLVIAVLVATATFQVGVGPPGGVWQD 322


>ref|XP_002308536.1| predicted protein [Populus trichocarpa] gi|222854512|gb|EEE92059.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
 Frame = +1

Query: 88  LQIISFLLKEASLNVNAVNSRGLTALDVLLTVPSES-NDIELVEMLRSAGGKRSLDHQEP 264
           +++I++L+ E+ + VNA+N+ G TALD++L     +  DI++   LR  G   S D    
Sbjct: 230 IEVINYLISESPIQVNALNANGFTALDIVLAQGRRNIKDIDIQNTLREGGAISSKD---- 285

Query: 265 PMQGQITSSIHGTVNQRVDQNTT-------RGGDRVAEMRNGILMMASLTATMTFQAALA 423
                + S++HG    R + +TT       R  + + E RN ++++ASL ATM FQA ++
Sbjct: 286 -----MPSTMHGLDAIRPNNSTTLNERNCWRKKNWLEERRNALMVVASLIATMAFQAGIS 340

Query: 424 PPGGFWQDWXXXXXXXXXXXXXXXXXAPPPRPEHKPGTVVIYDLNRKDFTSFLFWDXXXX 603
           PP G WQ+                    PP   H+ G  ++ D    DF  F+ ++    
Sbjct: 341 PPNGNWQE----------------DRQQPPSQSHEAGRSIMADKMPDDFAFFVGYNTTSF 384

Query: 604 XXXXXXXXXXXXPMPFKHD-------STRWTVVRYSIYTVVFSVLLIFTEAVQLTTNK 756
                        +PFK            W  V  +I+T   S+  + +   + TT K
Sbjct: 385 LASISVIILLISGLPFKWRIFTWILMIIMWIAVIATIWTYYISISCLSSRRGESTTAK 442


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