BLASTX nr result
ID: Coptis24_contig00009821
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00009821
(539 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|2... 181 8e-47
ref|XP_002310019.1| predicted protein [Populus trichocarpa] gi|2... 169 2e-43
ref|XP_002528672.1| protein binding protein, putative [Ricinus c... 166 2e-42
ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 162 2e-41
ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 162 2e-41
>ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|222855797|gb|EEE93344.1|
predicted protein [Populus trichocarpa]
Length = 827
Score = 181 bits (458), Expect(2) = 8e-47
Identities = 90/165 (54%), Positives = 108/165 (65%)
Frame = -2
Query: 496 LKTCKRARADVCFLHKVGEQSFPLSLFAKNDPHRSDIARLGGSFTHLLKAHPLDDEEREV 317
LK C+ DV FLH+ GEQSFP+ LF KNDPHR+DI+RLGGSF+HL K+HP+ D+E EV
Sbjct: 580 LKRCEPCGHDVGFLHRGGEQSFPVDLFLKNDPHRTDISRLGGSFSHLSKSHPVYDQEAEV 639
Query: 316 IXXXXXXXXXXXXXXXXXXXXXXXXXEREVIRWEEGCVDNEEAHVTHSSRQKPCCCSSFD 137
I RWEEGC+D+EE VTH + QKPCCCSS D
Sbjct: 640 I------------------------------RWEEGCMDDEETRVTHKTTQKPCCCSSHD 669
Query: 136 VDFLSISSNQIRYNAKGSRVHKNSIPERSAHVSTDCSNRSLNDEI 2
++ IS +QIRYNAKGSRVH IP+RSAHV+ +CS SLNDEI
Sbjct: 670 IELSKISKHQIRYNAKGSRVHCGPIPDRSAHVAAECSEGSLNDEI 714
Score = 31.6 bits (70), Expect(2) = 8e-47
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 539 FLSEGFGGSDICGWIK 492
FLSEGF DICGW+K
Sbjct: 566 FLSEGFAMRDICGWLK 581
>ref|XP_002310019.1| predicted protein [Populus trichocarpa] gi|222852922|gb|EEE90469.1|
predicted protein [Populus trichocarpa]
Length = 827
Score = 169 bits (428), Expect(2) = 2e-43
Identities = 82/165 (49%), Positives = 106/165 (64%)
Frame = -2
Query: 496 LKTCKRARADVCFLHKVGEQSFPLSLFAKNDPHRSDIARLGGSFTHLLKAHPLDDEEREV 317
LK C+ DV FLH+ GEQSFP+ +F KNDPHR+DI+RLGGSF+H+ K+HP D+E EV
Sbjct: 580 LKRCEPNGLDVGFLHRGGEQSFPVDIFLKNDPHRTDISRLGGSFSHISKSHPAHDQEAEV 639
Query: 316 IXXXXXXXXXXXXXXXXXXXXXXXXXEREVIRWEEGCVDNEEAHVTHSSRQKPCCCSSFD 137
I +WEEGC+D+EE VTH + KPCCCSS++
Sbjct: 640 I------------------------------QWEEGCMDDEETRVTHKTTPKPCCCSSYE 669
Query: 136 VDFLSISSNQIRYNAKGSRVHKNSIPERSAHVSTDCSNRSLNDEI 2
++ IS +QIRYN K SRVH + IP+RSA+V+ +CS SLNDEI
Sbjct: 670 IELSKISKHQIRYNTKDSRVHCSGIPDRSAYVAAECSEGSLNDEI 714
Score = 31.6 bits (70), Expect(2) = 2e-43
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 539 FLSEGFGGSDICGWIK 492
FLSEGF DICGW+K
Sbjct: 566 FLSEGFAMRDICGWLK 581
>ref|XP_002528672.1| protein binding protein, putative [Ricinus communis]
gi|223531895|gb|EEF33711.1| protein binding protein,
putative [Ricinus communis]
Length = 1348
Score = 166 bits (419), Expect(2) = 2e-42
Identities = 83/165 (50%), Positives = 105/165 (63%)
Frame = -2
Query: 496 LKTCKRARADVCFLHKVGEQSFPLSLFAKNDPHRSDIARLGGSFTHLLKAHPLDDEEREV 317
LK+C+ DV FLH+ GEQSFP+ LF KND +R+DI+RLGGSF+HL K+HP+ D+E E
Sbjct: 583 LKSCETNNYDVGFLHRGGEQSFPVDLFLKNDSYRTDISRLGGSFSHLSKSHPVYDQEVEA 642
Query: 316 IXXXXXXXXXXXXXXXXXXXXXXXXXEREVIRWEEGCVDNEEAHVTHSSRQKPCCCSSFD 137
+ RWEEGC+D+EE VTH + QKPCCCSS+D
Sbjct: 643 V------------------------------RWEEGCMDDEEIRVTHKTIQKPCCCSSYD 672
Query: 136 VDFLSISSNQIRYNAKGSRVHKNSIPERSAHVSTDCSNRSLNDEI 2
V+ +S +Q RY +KGSRVH IPERS HV+ +CS SLNDEI
Sbjct: 673 VELSKMSKHQTRYISKGSRVHCTPIPERSTHVAAECSAGSLNDEI 717
Score = 32.0 bits (71), Expect(2) = 2e-42
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 539 FLSEGFGGSDICGWIKDLQ 483
FLSEGF DICGW+K +
Sbjct: 569 FLSEGFAMRDICGWLKSCE 587
>ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
Length = 1269
Score = 162 bits (411), Expect(2) = 2e-41
Identities = 85/165 (51%), Positives = 103/165 (62%)
Frame = -2
Query: 496 LKTCKRARADVCFLHKVGEQSFPLSLFAKNDPHRSDIARLGGSFTHLLKAHPLDDEEREV 317
LKTCK DV FLH+ GEQSFP+ LF KNDPHR+DI+RLGGS++HL K HP
Sbjct: 583 LKTCK---TDVGFLHRGGEQSFPVHLFLKNDPHRADISRLGGSYSHLSKLHPT------- 632
Query: 316 IXXXXXXXXXXXXXXXXXXXXXXXXXEREVIRWEEGCVDNEEAHVTHSSRQKPCCCSSFD 137
E EVI+W+EGC+D+EE VTHS+RQKPCCCS++D
Sbjct: 633 -----------------------IGHEMEVIQWDEGCMDSEETRVTHSTRQKPCCCSNYD 669
Query: 136 VDFLSISSNQIRYNAKGSRVHKNSIPERSAHVSTDCSNRSLNDEI 2
DF +Y AKGSR H +SIPER AHV+ +CS+ SLNDEI
Sbjct: 670 SDFTRNFKVPAKYLAKGSRGHCSSIPERPAHVAAECSDGSLNDEI 714
Score = 31.6 bits (70), Expect(2) = 2e-41
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 539 FLSEGFGGSDICGWIK 492
FLSEGF DICGW+K
Sbjct: 569 FLSEGFALGDICGWLK 584
>ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
Length = 1269
Score = 162 bits (411), Expect(2) = 2e-41
Identities = 85/165 (51%), Positives = 104/165 (63%)
Frame = -2
Query: 496 LKTCKRARADVCFLHKVGEQSFPLSLFAKNDPHRSDIARLGGSFTHLLKAHPLDDEEREV 317
LK+CK ADV FLH+ GEQ+FP+ LF KNDPHR+DI+RLGGS++HL K HP D E EV
Sbjct: 583 LKSCK---ADVGFLHRGGEQTFPVHLFLKNDPHRADISRLGGSYSHLSKLHPTIDHEMEV 639
Query: 316 IXXXXXXXXXXXXXXXXXXXXXXXXXEREVIRWEEGCVDNEEAHVTHSSRQKPCCCSSFD 137
I +W+EGC+D+EE VTHS+RQKPCCCSS+D
Sbjct: 640 I------------------------------QWDEGCMDSEETRVTHSTRQKPCCCSSYD 669
Query: 136 VDFLSISSNQIRYNAKGSRVHKNSIPERSAHVSTDCSNRSLNDEI 2
DF +Y AKGS H +SIPER AHV+ +CS+ SLNDEI
Sbjct: 670 SDFTRNFKVPAKYLAKGSSGHCSSIPERPAHVAAECSDGSLNDEI 714
Score = 31.6 bits (70), Expect(2) = 2e-41
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1
Query: 539 FLSEGFGGSDICGWIK 492
FLSEGF DICGW+K
Sbjct: 569 FLSEGFALGDICGWLK 584