BLASTX nr result

ID: Coptis24_contig00009820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009820
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_002310019.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49
ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l...   196   1e-48
ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l...   196   2e-48
ref|XP_002528672.1| protein binding protein, putative [Ricinus c...   194   5e-48

>ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|222855797|gb|EEE93344.1|
            predicted protein [Populus trichocarpa]
          Length = 827

 Score =  206 bits (524), Expect = 2e-51
 Identities = 94/150 (62%), Positives = 115/150 (76%)
 Frame = -1

Query: 450  FLSEGFGRSDMCGWMKDSCKRARVDVGFLHKGGEQSFPLSLFVKNDPHRSDIARLGGSFT 271
            FLSEGF   D+CGW+K  C+    DVGFLH+GGEQSFP+ LF+KNDPHR+DI+RLGGSF+
Sbjct: 566  FLSEGFAMRDICGWLK-RCEPCGHDVGFLHRGGEQSFPVDLFLKNDPHRTDISRLGGSFS 624

Query: 270  HLLKAHPLDDEEREVIQWEEGCVDNEEAHVTHSSREKPCCCXXXXXXXXXXXXDQIRYSA 91
            HL K+HP+ D+E EVI+WEEGC+D+EE  VTH + +KPCCC             QIRY+A
Sbjct: 625  HLSKSHPVYDQEAEVIRWEEGCMDDEETRVTHKTTQKPCCCSSHDIELSKISKHQIRYNA 684

Query: 90   KGSRVHGNSIPERSAHVSTDCSNGSLNDEI 1
            KGSRVH   IP+RSAHV+ +CS GSLNDEI
Sbjct: 685  KGSRVHCGPIPDRSAHVAAECSEGSLNDEI 714


>ref|XP_002310019.1| predicted protein [Populus trichocarpa] gi|222852922|gb|EEE90469.1|
            predicted protein [Populus trichocarpa]
          Length = 827

 Score =  200 bits (508), Expect = 1e-49
 Identities = 90/150 (60%), Positives = 113/150 (75%)
 Frame = -1

Query: 450  FLSEGFGRSDMCGWMKDSCKRARVDVGFLHKGGEQSFPLSLFVKNDPHRSDIARLGGSFT 271
            FLSEGF   D+CGW+K  C+   +DVGFLH+GGEQSFP+ +F+KNDPHR+DI+RLGGSF+
Sbjct: 566  FLSEGFAMRDICGWLK-RCEPNGLDVGFLHRGGEQSFPVDIFLKNDPHRTDISRLGGSFS 624

Query: 270  HLLKAHPLDDEEREVIQWEEGCVDNEEAHVTHSSREKPCCCXXXXXXXXXXXXDQIRYSA 91
            H+ K+HP  D+E EVIQWEEGC+D+EE  VTH +  KPCCC             QIRY+ 
Sbjct: 625  HISKSHPAHDQEAEVIQWEEGCMDDEETRVTHKTTPKPCCCSSYEIELSKISKHQIRYNT 684

Query: 90   KGSRVHGNSIPERSAHVSTDCSNGSLNDEI 1
            K SRVH + IP+RSA+V+ +CS GSLNDEI
Sbjct: 685  KDSRVHCSGIPDRSAYVAAECSEGSLNDEI 714


>ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
          Length = 1269

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/150 (61%), Positives = 112/150 (74%)
 Frame = -1

Query: 450  FLSEGFGRSDMCGWMKDSCKRARVDVGFLHKGGEQSFPLSLFVKNDPHRSDIARLGGSFT 271
            FLSEGF   D+CGW+K SCK    DVGFLH+GGEQ+FP+ LF+KNDPHR+DI+RLGGS++
Sbjct: 569  FLSEGFALGDICGWLK-SCK---ADVGFLHRGGEQTFPVHLFLKNDPHRADISRLGGSYS 624

Query: 270  HLLKAHPLDDEEREVIQWEEGCVDNEEAHVTHSSREKPCCCXXXXXXXXXXXXDQIRYSA 91
            HL K HP  D E EVIQW+EGC+D+EE  VTHS+R+KPCCC               +Y A
Sbjct: 625  HLSKLHPTIDHEMEVIQWDEGCMDSEETRVTHSTRQKPCCCSSYDSDFTRNFKVPAKYLA 684

Query: 90   KGSRVHGNSIPERSAHVSTDCSNGSLNDEI 1
            KGS  H +SIPER AHV+ +CS+GSLNDEI
Sbjct: 685  KGSSGHCSSIPERPAHVAAECSDGSLNDEI 714


>ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
          Length = 1269

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/150 (61%), Positives = 112/150 (74%)
 Frame = -1

Query: 450  FLSEGFGRSDMCGWMKDSCKRARVDVGFLHKGGEQSFPLSLFVKNDPHRSDIARLGGSFT 271
            FLSEGF   D+CGW+K +CK    DVGFLH+GGEQSFP+ LF+KNDPHR+DI+RLGGS++
Sbjct: 569  FLSEGFALGDICGWLK-TCK---TDVGFLHRGGEQSFPVHLFLKNDPHRADISRLGGSYS 624

Query: 270  HLLKAHPLDDEEREVIQWEEGCVDNEEAHVTHSSREKPCCCXXXXXXXXXXXXDQIRYSA 91
            HL K HP    E EVIQW+EGC+D+EE  VTHS+R+KPCCC               +Y A
Sbjct: 625  HLSKLHPTIGHEMEVIQWDEGCMDSEETRVTHSTRQKPCCCSNYDSDFTRNFKVPAKYLA 684

Query: 90   KGSRVHGNSIPERSAHVSTDCSNGSLNDEI 1
            KGSR H +SIPER AHV+ +CS+GSLNDEI
Sbjct: 685  KGSRGHCSSIPERPAHVAAECSDGSLNDEI 714


>ref|XP_002528672.1| protein binding protein, putative [Ricinus communis]
            gi|223531895|gb|EEF33711.1| protein binding protein,
            putative [Ricinus communis]
          Length = 1348

 Score =  194 bits (494), Expect = 5e-48
 Identities = 89/150 (59%), Positives = 111/150 (74%)
 Frame = -1

Query: 450  FLSEGFGRSDMCGWMKDSCKRARVDVGFLHKGGEQSFPLSLFVKNDPHRSDIARLGGSFT 271
            FLSEGF   D+CGW+K SC+    DVGFLH+GGEQSFP+ LF+KND +R+DI+RLGGSF+
Sbjct: 569  FLSEGFAMRDICGWLK-SCETNNYDVGFLHRGGEQSFPVDLFLKNDSYRTDISRLGGSFS 627

Query: 270  HLLKAHPLDDEEREVIQWEEGCVDNEEAHVTHSSREKPCCCXXXXXXXXXXXXDQIRYSA 91
            HL K+HP+ D+E E ++WEEGC+D+EE  VTH + +KPCCC             Q RY +
Sbjct: 628  HLSKSHPVYDQEVEAVRWEEGCMDDEEIRVTHKTIQKPCCCSSYDVELSKMSKHQTRYIS 687

Query: 90   KGSRVHGNSIPERSAHVSTDCSNGSLNDEI 1
            KGSRVH   IPERS HV+ +CS GSLNDEI
Sbjct: 688  KGSRVHCTPIPERSTHVAAECSAGSLNDEI 717


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