BLASTX nr result

ID: Coptis24_contig00009815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009815
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61...   367   3e-99
ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61...   366   6e-99
ref|XP_002511947.1| Protein UNUSUAL FLORAL ORGANS, putative [Ric...   363   4e-98
ref|XP_002301389.1| predicted protein [Populus trichocarpa] gi|2...   358   1e-96
gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]        354   2e-95

>ref|XP_002276444.1| PREDICTED: F-box/kelch-repeat protein At3g61590 [Vitis vinifera]
            gi|297745382|emb|CBI40462.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  367 bits (941), Expect = 3e-99
 Identities = 168/253 (66%), Positives = 206/253 (81%)
 Frame = +3

Query: 279  MAGETSWVTHPFEDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPV 458
            M GE SW+ H  +D +R +  F SFS++ E+ +KE    V +D ILP++LLERILA LP+
Sbjct: 1    MEGEASWINHCLDDRRRDIGDFGSFSEIREEVNKEVAT-VSVDLILPNDLLERILAYLPI 59

Query: 459  ASVFRVGSVCKRWKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGI 638
            AS+ R GSVCKRW +IV  ++FLWN    LSQ+PWYFMFTSS+EP+GYAYDPI RKWY I
Sbjct: 60   ASILRAGSVCKRWHEIVSSKRFLWNKSHILSQKPWYFMFTSSDEPVGYAYDPIFRKWYSI 119

Query: 639  DLPCIEKSSWFVCTSYGLVCFMDNDNRSRLFICNPINKQVKILEEPPGLKFSDYSALAIS 818
            +LPCI  S+WF+ +S GLVCFMD+D+RS L+ICNP+ K+ K LEEPPGLKFSDYSALAIS
Sbjct: 120  ELPCINTSNWFITSSSGLVCFMDSDSRSELYICNPVTKRCKRLEEPPGLKFSDYSALAIS 179

Query: 819  VDRKLHNYTIAVVKSKQEPGDFFQWDLSIQLYDSDATLWKTSYTEVLTGWRGGDESVICD 998
            V+R  H+YTI++VKSKQ PG+FFQWDLSI +YDS+  +W T+ TEV+TGWR GDESVICD
Sbjct: 180  VNRISHHYTISIVKSKQVPGNFFQWDLSIHIYDSETMIWVTALTEVVTGWRAGDESVICD 239

Query: 999  GVLYFLIYSTGGG 1037
            GVLYFLIYSTGGG
Sbjct: 240  GVLYFLIYSTGGG 252


>ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Cucumis
            sativus] gi|449480293|ref|XP_004155853.1| PREDICTED:
            F-box/kelch-repeat protein At3g61590-like [Cucumis
            sativus]
          Length = 405

 Score =  366 bits (939), Expect = 6e-99
 Identities = 172/253 (67%), Positives = 203/253 (80%)
 Frame = +3

Query: 279  MAGETSWVTHPFEDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPV 458
            M G+TSW+ H   DM R +  F+S+ D T +  KE  + V ++ ILPD+LLERIL+ LP+
Sbjct: 1    MEGQTSWIRHCHTDMSRDLEDFDSYLDFTNEGGKEA-VAVSVESILPDDLLERILSYLPI 59

Query: 459  ASVFRVGSVCKRWKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGI 638
            AS+FR GSVCKRW DIV  R+FLWN    LSQ+PWYFMFTSS++PIGYAYDP+LRKWY I
Sbjct: 60   ASIFRAGSVCKRWHDIVSSRRFLWNVSHILSQKPWYFMFTSSDDPIGYAYDPVLRKWYAI 119

Query: 639  DLPCIEKSSWFVCTSYGLVCFMDNDNRSRLFICNPINKQVKILEEPPGLKFSDYSALAIS 818
            DLPCI+KS+ F+ +S GLVCFMDND+RS L +CNPI K    L EP G KFSDYSALAIS
Sbjct: 120  DLPCIDKSNCFIASSCGLVCFMDNDSRSELHVCNPITKCSMKLPEPLGSKFSDYSALAIS 179

Query: 819  VDRKLHNYTIAVVKSKQEPGDFFQWDLSIQLYDSDATLWKTSYTEVLTGWRGGDESVICD 998
            V+R  HNYTI+VVKSKQ PG+FFQWD+SI +YDS+  +W TS TEVLTGWRGGDESVICD
Sbjct: 180  VNRVSHNYTISVVKSKQVPGNFFQWDISIHIYDSETMMWVTSLTEVLTGWRGGDESVICD 239

Query: 999  GVLYFLIYSTGGG 1037
            GVLYFLIYSTGGG
Sbjct: 240  GVLYFLIYSTGGG 252


>ref|XP_002511947.1| Protein UNUSUAL FLORAL ORGANS, putative [Ricinus communis]
            gi|223549127|gb|EEF50616.1| Protein UNUSUAL FLORAL
            ORGANS, putative [Ricinus communis]
          Length = 405

 Score =  363 bits (932), Expect = 4e-98
 Identities = 170/253 (67%), Positives = 207/253 (81%)
 Frame = +3

Query: 279  MAGETSWVTHPFEDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPV 458
            M GETSW++  F+D+ R +  F+SFS+++++ +KE N  + +D ILPD+LLERILA LP+
Sbjct: 1    MEGETSWISDCFDDVARDIGEFDSFSELSDEGNKEVNT-ISVDLILPDDLLERILAYLPI 59

Query: 459  ASVFRVGSVCKRWKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGI 638
            AS+FR GSVCKRW++IV  R+FLWN    L Q+PWYFMFTSS+EP+GYAYDPILRKWYGI
Sbjct: 60   ASIFRAGSVCKRWREIVSSRRFLWNFSRVLPQKPWYFMFTSSDEPVGYAYDPILRKWYGI 119

Query: 639  DLPCIEKSSWFVCTSYGLVCFMDNDNRSRLFICNPINKQVKILEEPPGLKFSDYSALAIS 818
            +LPCIE S+ F+ +S GLVCFMD D+RS L++ NPI K  K LEEPPGLK +DYSALAIS
Sbjct: 120  NLPCIETSNLFIASSCGLVCFMDKDSRSALYVSNPITKFCKKLEEPPGLKIADYSALAIS 179

Query: 819  VDRKLHNYTIAVVKSKQEPGDFFQWDLSIQLYDSDATLWKTSYTEVLTGWRGGDESVICD 998
            V+R  H YTI+VVKSKQ PG+FFQWDL I  YDS+  +W TS+TEVLTGWR GDESVICD
Sbjct: 180  VNRTSHGYTISVVKSKQVPGNFFQWDLCIYTYDSETRMWLTSWTEVLTGWRSGDESVICD 239

Query: 999  GVLYFLIYSTGGG 1037
            GVLY LIYSTGGG
Sbjct: 240  GVLYVLIYSTGGG 252


>ref|XP_002301389.1| predicted protein [Populus trichocarpa] gi|222843115|gb|EEE80662.1|
            predicted protein [Populus trichocarpa]
          Length = 405

 Score =  358 bits (919), Expect = 1e-96
 Identities = 169/253 (66%), Positives = 201/253 (79%)
 Frame = +3

Query: 279  MAGETSWVTHPFEDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPV 458
            M GETSWV + FED  R +  F+SFS+++++  KE N  V +D ILPD+LLERILA LPV
Sbjct: 1    MEGETSWVINCFEDSTRGIGEFDSFSELSDEGSKEVN-AVSVDLILPDDLLERILACLPV 59

Query: 459  ASVFRVGSVCKRWKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGI 638
            AS+FR G VCKRW +IV  R+FLWN    L Q+PWYFMFTSS+EP+GYA+DP+LRKWYGI
Sbjct: 60   ASIFRAGCVCKRWHEIVSSRRFLWNFSHVLPQKPWYFMFTSSDEPVGYAFDPVLRKWYGI 119

Query: 639  DLPCIEKSSWFVCTSYGLVCFMDNDNRSRLFICNPINKQVKILEEPPGLKFSDYSALAIS 818
            DLP I+ S+WF+ +S GLV FMDND RS L++CNPI K  + L+E PGLKF DYSALAIS
Sbjct: 120  DLPRIKTSNWFIASSCGLVSFMDNDTRSELYVCNPITKHCRKLQESPGLKFPDYSALAIS 179

Query: 819  VDRKLHNYTIAVVKSKQEPGDFFQWDLSIQLYDSDATLWKTSYTEVLTGWRGGDESVICD 998
            V+R  H YTI++VKSKQ PG+FFQWDLSI +YDSD  +W TS TEVLTGWRGGDESVIC 
Sbjct: 180  VNRISHGYTISIVKSKQVPGNFFQWDLSIHIYDSDTRMWVTSCTEVLTGWRGGDESVICG 239

Query: 999  GVLYFLIYSTGGG 1037
            G LY LIYS GGG
Sbjct: 240  GFLYVLIYSAGGG 252


>gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 405

 Score =  354 bits (909), Expect = 2e-95
 Identities = 169/253 (66%), Positives = 199/253 (78%)
 Frame = +3

Query: 279  MAGETSWVTHPFEDMQRVVPGFESFSDVTEDAHKEENMGVPLDGILPDELLERILALLPV 458
            M  +TSW+ H   DM R +  F+S+ D T +   EE + V ++ ILPD+LLERIL+ LP+
Sbjct: 1    MERQTSWIRHCHTDMSRDLEDFDSYLDFTNEGG-EEAVAVSVESILPDDLLERILSYLPI 59

Query: 459  ASVFRVGSVCKRWKDIVDERKFLWNSLDSLSQRPWYFMFTSSEEPIGYAYDPILRKWYGI 638
            AS+FR GSVCKRW DIV  R+FLWN    LSQ+PWYFMFTSS+EPIGYAYDP+LRKWY I
Sbjct: 60   ASIFRAGSVCKRWHDIVSSRRFLWNVSHILSQKPWYFMFTSSDEPIGYAYDPVLRKWYAI 119

Query: 639  DLPCIEKSSWFVCTSYGLVCFMDNDNRSRLFICNPINKQVKILEEPPGLKFSDYSALAIS 818
            DLPCI+KS+  + +S GLVCFMD D+RS L +CNPI K    L EP G K SDYSALAIS
Sbjct: 120  DLPCIDKSNCDIASSCGLVCFMDKDSRSELHVCNPITKCSMRLPEPLGSKSSDYSALAIS 179

Query: 819  VDRKLHNYTIAVVKSKQEPGDFFQWDLSIQLYDSDATLWKTSYTEVLTGWRGGDESVICD 998
            V+R  HNYTI+VVKSKQ PG+FFQWD+SI +YDS+  +W TS TEVLTGWRGGDESVICD
Sbjct: 180  VNRVSHNYTISVVKSKQVPGNFFQWDISIHIYDSEKMMWVTSLTEVLTGWRGGDESVICD 239

Query: 999  GVLYFLIYSTGGG 1037
            GVLYFLIYSTGGG
Sbjct: 240  GVLYFLIYSTGGG 252


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