BLASTX nr result

ID: Coptis24_contig00009810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009810
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532552.1| conserved hypothetical protein [Ricinus comm...    85   7e-15
emb|CBI26633.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002280336.1| PREDICTED: uncharacterized protein LOC100255...    84   1e-14
ref|XP_002316766.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|AEW07698.1| Pinus taeda anonymous locus 0_9213_01 genomic seq...    76   3e-12

>ref|XP_002532552.1| conserved hypothetical protein [Ricinus communis]
           gi|223527707|gb|EEF29813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 714

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -2

Query: 351 LMGQWSSPDSRNPQVTRGIKGCIEWPRDAQKNSLKAKLLEARMES 217
           L GQWSSPDS NP +TRG+KGCIEWPR AQKNSLKAKL+EARMES
Sbjct: 657 LTGQWSSPDSGNPHITRGMKGCIEWPRGAQKNSLKAKLMEARMES 701


>emb|CBI26633.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = -2

Query: 351 LMGQWSSPDSRNPQVTRGIKGCIEWPRDAQKNSLKAKLLEARMES 217
           L GQWSSPDS NP V RG+KGCIEWPR AQKNSLKAKLLEARMES
Sbjct: 616 LAGQWSSPDSGNPHVNRGMKGCIEWPRGAQKNSLKAKLLEARMES 660


>ref|XP_002280336.1| PREDICTED: uncharacterized protein LOC100255542 [Vitis vinifera]
          Length = 717

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/45 (86%), Positives = 40/45 (88%)
 Frame = -2

Query: 351 LMGQWSSPDSRNPQVTRGIKGCIEWPRDAQKNSLKAKLLEARMES 217
           L GQWSSPDS NP V RG+KGCIEWPR AQKNSLKAKLLEARMES
Sbjct: 660 LAGQWSSPDSGNPHVNRGMKGCIEWPRGAQKNSLKAKLLEARMES 704


>ref|XP_002316766.1| predicted protein [Populus trichocarpa] gi|222859831|gb|EEE97378.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = -2

Query: 351 LMGQWSSPDSRNPQVTRGIKGCIEWPRDAQKNSLKAKLLEARMES 217
           L+GQWSSPDS NP +TRG+KGCI+WPR   KNSLKAKLLEARMES
Sbjct: 442 LVGQWSSPDSVNPHMTRGMKGCIDWPR-GHKNSLKAKLLEARMES 485


>gb|AEW07698.1| Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163574|gb|AFG64533.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163576|gb|AFG64534.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163578|gb|AFG64535.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163580|gb|AFG64536.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163582|gb|AFG64537.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163584|gb|AFG64538.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163586|gb|AFG64539.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163588|gb|AFG64540.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163590|gb|AFG64541.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163592|gb|AFG64542.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163594|gb|AFG64543.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163596|gb|AFG64544.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163598|gb|AFG64545.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163600|gb|AFG64546.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
           gi|383163602|gb|AFG64547.1| Pinus taeda anonymous locus
           0_9213_01 genomic sequence gi|383163604|gb|AFG64548.1|
           Pinus taeda anonymous locus 0_9213_01 genomic sequence
          Length = 122

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -2

Query: 348 MGQWSSPDSRNPQVTRGIKGCIEWPRDAQKNSLKAKLLEARMES 217
           +G WSSPD+ NP +TRGIKG IEWPR  QKNSLKAKLLEA+MES
Sbjct: 66  LGTWSSPDASNPHITRGIKGFIEWPRGIQKNSLKAKLLEAKMES 109


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