BLASTX nr result

ID: Coptis24_contig00009808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009808
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELW61407.1| hypothetical protein TREES_T100003194 [Tupaia chi...    60   2e-07

>gb|ELW61407.1| hypothetical protein TREES_T100003194 [Tupaia chinensis]
          Length = 522

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -1

Query: 331 SPSVTTG-VEPPHCNGHDASSSVTNGMKPPGCNGHDASSSVTNGVKPPHCNGHDASSSVA 155
           +PS +TG VEP H N H A S  T  ++P   N H A S  T  V+P H N H A S   
Sbjct: 202 APSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCST 258

Query: 154 NGAKPQYYNGHAASYSDPNEVKPLHSNGHNAPQSMRGAVPP 32
              +P ++N HA S S    V+P H N H+AP    G+V P
Sbjct: 259 GSVEPSHFNHHAPSCS-TGSVEPSHFN-HHAPSCSTGSVEP 297



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -1

Query: 331 SPSVTTG-VEPPHCNGHDASSSVTNGMKPPGCNGHDASSSVTNGVKPPHCNGHDASSSVA 155
           +PS +TG VEP H N H A S  T  ++P   N H A S  T  V+P H N H A S   
Sbjct: 236 APSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCST 292

Query: 154 NGAKPQYYNGHAASYSDPNEVKPLHSNGHNAPQSMRGAVPP 32
              +P ++N HA S S    V+P H N H+AP    G+V P
Sbjct: 293 GSVEPSHFNHHAPSCS-TGSVEPSHFN-HHAPSCSTGSVEP 331



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -1

Query: 331 SPSVTTG-VEPPHCNGHDASSSVTNGMKPPGCNGHDASSSVTNGVKPPHCNGHDASSSVA 155
           +PS +TG VEP H N H A S  T  ++P   N H A S  T  V+P H N H A S   
Sbjct: 287 APSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCST 343

Query: 154 NGAKPQYYNGHAASYSDPNEVKPLHSNGHNAPQSMRGAVPP 32
              +P ++N HA S S    V+P H N H+AP    G+V P
Sbjct: 344 GSVEPSHFNHHAPSCS-TGSVEPSHFN-HHAPSCSTGSVEP 382



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/95 (41%), Positives = 48/95 (50%)
 Frame = -1

Query: 316 TGVEPPHCNGHDASSSVTNGMKPPGCNGHDASSSVTNGVKPPHCNGHDASSSVANGAKPQ 137
           T VEP H N H A S  T  ++P   N H A S  T  V+P H N H A S      +P 
Sbjct: 191 TSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPS 247

Query: 136 YYNGHAASYSDPNEVKPLHSNGHNAPQSMRGAVPP 32
           ++N HA S S    V+P H N H+AP    G+V P
Sbjct: 248 HFNHHAPSCS-TGSVEPSHFN-HHAPSCSTGSVEP 280



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -1

Query: 331 SPSVTTG-VEPPHCNGHDASSSVTNGMKPPGCNGHDASSSVTNGVKPPHCNGHDASSSVA 155
           +PS +TG VEP H N H A S  T  ++P   N H A S  T  V+P H N H A S   
Sbjct: 338 APSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCSTGSVEPSHFN-HHAPSCST 394

Query: 154 NGAKPQYYNGHAASYSDPNEVKPLHSNGHNAPQSMRGA 41
              +P ++N HA S S    V+P H N H+AP    G+
Sbjct: 395 GSVEPSHFNHHAPSCS-TGSVEPSHFN-HHAPSCSTGS 430


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