BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009803
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   467   e-129
ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...   442   e-122
ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   434   e-119
emb|CBI16803.3| unnamed protein product [Vitis vinifera]              431   e-119
dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]    430   e-118

>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  467 bits (1202), Expect = e-129
 Identities = 232/311 (74%), Positives = 276/311 (88%), Gaps = 1/311 (0%)
 Frame = -3

Query: 931 SLPIASAEKRIVEEVRKNDTLIIVGETGSGKSTQLPQFLFKAGFCREGKVIGITQPRRVA 752
           +LPIAS EKR+VEEV+KNDTLIIVGETGSGK+TQLPQFL   GFC +GK+IGITQPRRVA
Sbjct: 36  ALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGKIIGITQPRRVA 95

Query: 751 SITVAKRVAEESGVELGQRVGYSIRFDDMTSPSTRIKYMTDGLLLRETLLDPFLSKYSVI 572
           ++TVAKRVAEE GVELGQ+VGYSIRF+D+TS STRIKYMTDGLLLRE LLDPFLS+YSVI
Sbjct: 96  AVTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYSVI 155

Query: 571 IVDEAHERTVHTDVLLGLLKNVQEARSQSSSQQFNLEKTKSSNGTMLDKE-IPQCSSILK 395
           IVDEAHERT+HTDVLLGLLKNVQ ARS+S ++  N+E T+++ G +L +E    C SILK
Sbjct: 156 IVDEAHERTIHTDVLLGLLKNVQNARSRSINKCLNIENTEANYGKLLKRENDANCVSILK 215

Query: 394 PCQGRKFPPLKLIVMSASLDAKGFSDYFFGAKAVHVQGRQYPVDILYTNHVETDFLEAAL 215
            CQG KFP LKLI+MSASLDA+GFS+YF GA++V++QGRQ+PVDI YT+H E D+++AAL
Sbjct: 216 RCQGVKFPSLKLIIMSASLDARGFSEYFGGARSVYIQGRQFPVDIFYTHHAEPDYVDAAL 275

Query: 214 ITIFQIHLEEGPGDVLVFLTGQEEIESVERLVKERIRQLSEDNQNMIMFPIYSALPSEKQ 35
           ITIFQIHLEEGPGD+LVFLTGQEEIESVERLV+ER+RQL E +Q ++  PI+S+LPSE+Q
Sbjct: 276 ITIFQIHLEEGPGDILVFLTGQEEIESVERLVQERLRQLPEGSQKLLTVPIFSSLPSEQQ 335

Query: 34  MLAFKPAPSGF 2
           M AF PAP+GF
Sbjct: 336 MKAFMPAPAGF 346


>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score =  442 bits (1138), Expect = e-122
 Identities = 224/310 (72%), Positives = 260/310 (83%)
 Frame = -3

Query: 931 SLPIASAEKRIVEEVRKNDTLIIVGETGSGKSTQLPQFLFKAGFCREGKVIGITQPRRVA 752
           SLPI   EKR+VEEVRK+D LIIVGETGSGK+TQ+PQFLF AGFCR+G+VIGITQPRRVA
Sbjct: 29  SLPITPVEKRLVEEVRKHDVLIIVGETGSGKTTQIPQFLFDAGFCRDGRVIGITQPRRVA 88

Query: 751 SITVAKRVAEESGVELGQRVGYSIRFDDMTSPSTRIKYMTDGLLLRETLLDPFLSKYSVI 572
           ++TVAKRVAEE GVELGQ+VGYS+RFDD TS STRIKYMTDGLLLRE LLDP+LSKYSVI
Sbjct: 89  AVTVAKRVAEECGVELGQKVGYSVRFDDATSGSTRIKYMTDGLLLREALLDPYLSKYSVI 148

Query: 571 IVDEAHERTVHTDVLLGLLKNVQEARSQSSSQQFNLEKTKSSNGTMLDKEIPQCSSILKP 392
           IVDEAHERTVHTDVL+GLLKNVQ ARS S S    L     +   +L+KE  Q  S LK 
Sbjct: 149 IVDEAHERTVHTDVLMGLLKNVQLARSSSVSGGQGLIFGNKNMNKLLEKENDQSGSFLKK 208

Query: 391 CQGRKFPPLKLIVMSASLDAKGFSDYFFGAKAVHVQGRQYPVDILYTNHVETDFLEAALI 212
               K+ PLKLI+MSASLDA+ FS+YF GAKAVH+QGRQ+PVDI YT   ETD+L+A+LI
Sbjct: 209 PHHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQGRQFPVDIFYTRDAETDYLDASLI 268

Query: 211 TIFQIHLEEGPGDVLVFLTGQEEIESVERLVKERIRQLSEDNQNMIMFPIYSALPSEKQM 32
           TIFQIHLEEGPGD+LVFLTGQEEIESVERL+ E++ QL ++NQ +++  I++ALPSE+QM
Sbjct: 269 TIFQIHLEEGPGDILVFLTGQEEIESVERLINEKLPQLPQENQKLLVVSIFAALPSEQQM 328

Query: 31  LAFKPAPSGF 2
             F PAPSGF
Sbjct: 329 RVFAPAPSGF 338


>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  434 bits (1117), Expect = e-119
 Identities = 219/310 (70%), Positives = 259/310 (83%)
 Frame = -3

Query: 931 SLPIASAEKRIVEEVRKNDTLIIVGETGSGKSTQLPQFLFKAGFCREGKVIGITQPRRVA 752
           SLPIA  EKR+VEEVRK+D LIIVGETGSGK+TQ+PQFLF AGFC +G+VIGITQPRRVA
Sbjct: 29  SLPIAPVEKRLVEEVRKHDVLIIVGETGSGKTTQIPQFLFDAGFCCDGRVIGITQPRRVA 88

Query: 751 SITVAKRVAEESGVELGQRVGYSIRFDDMTSPSTRIKYMTDGLLLRETLLDPFLSKYSVI 572
           ++TVAKRVAEE GVELGQ+VGYS+RFDD TS  TRIKYMTDGLLLRE LLDP+LSKYSVI
Sbjct: 89  AVTVAKRVAEECGVELGQKVGYSVRFDDATSGLTRIKYMTDGLLLREALLDPYLSKYSVI 148

Query: 571 IVDEAHERTVHTDVLLGLLKNVQEARSQSSSQQFNLEKTKSSNGTMLDKEIPQCSSILKP 392
           IVDEAHERTVHTDVL+GLLK+VQ ARS S S    L     +   + +KE  Q    LK 
Sbjct: 149 IVDEAHERTVHTDVLMGLLKSVQLARSSSVSGGQGLNFGNKNMNKLFEKENDQSGIFLKK 208

Query: 391 CQGRKFPPLKLIVMSASLDAKGFSDYFFGAKAVHVQGRQYPVDILYTNHVETDFLEAALI 212
            +  K+ PLKLI+MSASLDA+ FS+YF GAKAVH+QGRQ+PVDI YT   ETD+L+A+LI
Sbjct: 209 PRHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQGRQFPVDIFYTRDAETDYLDASLI 268

Query: 211 TIFQIHLEEGPGDVLVFLTGQEEIESVERLVKERIRQLSEDNQNMIMFPIYSALPSEKQM 32
           TIFQIHLEEGPGD+LVFLTGQEEIESVERL+ E++ QL +++Q +++ PI++ALPSE+QM
Sbjct: 269 TIFQIHLEEGPGDILVFLTGQEEIESVERLISEKLPQLPQESQKLLVVPIFAALPSEQQM 328

Query: 31  LAFKPAPSGF 2
             F P+PSGF
Sbjct: 329 RVFAPSPSGF 338


>emb|CBI16803.3| unnamed protein product [Vitis vinifera]
          Length = 1408

 Score =  431 bits (1109), Expect = e-119
 Identities = 219/310 (70%), Positives = 254/310 (81%)
 Frame = -3

Query: 931  SLPIASAEKRIVEEVRKNDTLIIVGETGSGKSTQLPQFLFKAGFCREGKVIGITQPRRVA 752
            +LPIAS EKR+VEEV+KNDTLIIVGETGSGK+TQLPQFL   GFC +GK+IGITQPRRVA
Sbjct: 766  ALPIASVEKRLVEEVQKNDTLIIVGETGSGKTTQLPQFLLNGGFCHDGKIIGITQPRRVA 825

Query: 751  SITVAKRVAEESGVELGQRVGYSIRFDDMTSPSTRIKYMTDGLLLRETLLDPFLSKYSVI 572
            ++TVAKRVAEE GVELGQ+VGYSIRF+D+TS STRIKYMTDGLLLRE LLDPFLS+YSVI
Sbjct: 826  AVTVAKRVAEECGVELGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYSVI 885

Query: 571  IVDEAHERTVHTDVLLGLLKNVQEARSQSSSQQFNLEKTKSSNGTMLDKEIPQCSSILKP 392
            IVDEAHERT+HTDVLLGLLKNVQ AR                                  
Sbjct: 886  IVDEAHERTIHTDVLLGLLKNVQNAR---------------------------------- 911

Query: 391  CQGRKFPPLKLIVMSASLDAKGFSDYFFGAKAVHVQGRQYPVDILYTNHVETDFLEAALI 212
            CQG KFP LKLI+MSASLDA+GFS+YF GA++V++QGRQ+PVDI YT+H E D+++AALI
Sbjct: 912  CQGVKFPSLKLIIMSASLDARGFSEYFGGARSVYIQGRQFPVDIFYTHHAEPDYVDAALI 971

Query: 211  TIFQIHLEEGPGDVLVFLTGQEEIESVERLVKERIRQLSEDNQNMIMFPIYSALPSEKQM 32
            TIFQIHLEEGPGD+LVFLTGQEEIESVERLV+ER+RQL E +Q ++  PI+S+LPSE+QM
Sbjct: 972  TIFQIHLEEGPGDILVFLTGQEEIESVERLVQERLRQLPEGSQKLLTVPIFSSLPSEQQM 1031

Query: 31   LAFKPAPSGF 2
             AF PAP+GF
Sbjct: 1032 KAFMPAPAGF 1041


>dbj|BAJ93529.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  430 bits (1106), Expect = e-118
 Identities = 223/310 (71%), Positives = 258/310 (83%), Gaps = 1/310 (0%)
 Frame = -3

Query: 931 SLPIASAEKRIVEEVRKNDTLIIVGETGSGKSTQLPQFLFKAGFCREGKVIGITQPRRVA 752
           SLPIAS EKR+V+EVRKNDTLI+VGETGSGK+TQLPQFL+  GFC++GKVIGITQPRRVA
Sbjct: 29  SLPIASVEKRLVDEVRKNDTLIVVGETGSGKTTQLPQFLYDGGFCQDGKVIGITQPRRVA 88

Query: 751 SITVAKRVAEESGVELGQRVGYSIRFDDMTSPSTRIKYMTDGLLLRETLLDPFLSKYSVI 572
           ++TVAKRVAEE   +LG++VGYSIRFDD TS +TRIKYMTDGLLLRE LLDP LSKYSV+
Sbjct: 89  AVTVAKRVAEECNDQLGRKVGYSIRFDDSTSNATRIKYMTDGLLLREALLDPLLSKYSVV 148

Query: 571 IVDEAHERTVHTDVLLGLLKNVQEARSQSSSQQFNLEKTKSSNGTML-DKEIPQCSSILK 395
           IVDEAHERTVHTDVLLGLLK VQ +RS  +++          NG +L DK+     S LK
Sbjct: 149 IVDEAHERTVHTDVLLGLLKKVQHSRSLHANK----------NGKILSDKQDHSQVSTLK 198

Query: 394 PCQGRKFPPLKLIVMSASLDAKGFSDYFFGAKAVHVQGRQYPVDILYTNHVETDFLEAAL 215
            CQG K  PLKLI+MSASLDAK FSDYF GAKAVH+QGRQYPVD LYT   E+D+L+A L
Sbjct: 199 ACQGIKTAPLKLIIMSASLDAKCFSDYFGGAKAVHIQGRQYPVDTLYTYQPESDYLDATL 258

Query: 214 ITIFQIHLEEGPGDVLVFLTGQEEIESVERLVKERIRQLSEDNQNMIMFPIYSALPSEKQ 35
           +TIFQIHLEEGPGD+L FLTGQEEIES+ERL++ER RQL  D+  + + PIYS+LPSE+Q
Sbjct: 259 VTIFQIHLEEGPGDILAFLTGQEEIESLERLIQERARQLPADSSKIWITPIYSSLPSEQQ 318

Query: 34  MLAFKPAPSG 5
           M AFKPAPSG
Sbjct: 319 MNAFKPAPSG 328