BLASTX nr result

ID: Coptis24_contig00009796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009796
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   147   9e-34
emb|CBI17376.3| unnamed protein product [Vitis vinifera]              144   6e-33
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]   143   1e-32
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]   140   1e-31
emb|CAC44142.1| putative polyprotein [Cicer arietinum]                140   1e-31

>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/166 (47%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
 Frame = -2

Query: 491  HYLYGEKFEIFSDHKSLKYLFSQKELNMRQR*WMELLEDFRVSIQYHPGKANVVADALSR 312
            HYLYGEKFE++SDHKSLKY+F+QK+LN RQR WME LED+  ++ YHPGKANVVADALSR
Sbjct: 1038 HYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSR 1097

Query: 311  KPRAMAAYLMTYWWRLIDTLVDYD--IHQTAREPMVYLGVVSVQPTLMSRVIEAQIHDVW 138
            K       L    + +   + D++  + Q  R P +Y   +S +P ++ R++EAQ+HD +
Sbjct: 1098 KSYGQLFSLGLREFEMYAVIEDFELCLVQEGRGPCLY--SISARPMVIQRIVEAQVHDEF 1155

Query: 137  ---VQARLVDISSEGTSEWTVGIDKGLRLNGRLVVPESAELRKEIL 9
               V+A+LV  + E    W++  D  +R  GRL VP+  ELR E+L
Sbjct: 1156 LEKVKAQLV--AGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELL 1199


>emb|CBI17376.3| unnamed protein product [Vitis vinifera]
          Length = 1567

 Score =  144 bits (364), Expect = 6e-33
 Identities = 77/166 (46%), Positives = 110/166 (66%), Gaps = 5/166 (3%)
 Frame = -2

Query: 491  HYLYGEKFEIFSDHKSLKYLFSQKELNMRQR*WMELLEDFRVSIQYHPGKANVVADALSR 312
            HYLYGEKFE++SDHKSLKY+F+QK+LN RQR WME LED+  ++ Y PGKANVVADALSR
Sbjct: 1195 HYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYQPGKANVVADALSR 1254

Query: 311  KPRAMAAYLMTYWWRLIDTLVDYD--IHQTAREPMVYLGVVSVQPTLMSRVIEAQIHDVW 138
            K     + L    + +   + D++  + Q  R P +Y   +S +P ++ R++EAQ+HD +
Sbjct: 1255 KSYGQLSSLGLREFEMHAVIEDFELCLSQEGRGPCLY--SISARPMIIQRIVEAQVHDEF 1312

Query: 137  ---VQARLVDISSEGTSEWTVGIDKGLRLNGRLVVPESAELRKEIL 9
               V+A+LV  + E    W++  D  +R  G+L VP+  ELR E+L
Sbjct: 1313 LEKVKAQLV--AGEIDENWSMYEDGSVRFKGKLCVPKDVELRNELL 1356


>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
          Length = 1387

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
 Frame = -2

Query: 491  HYLYGEKFEIFSDHKSLKYLFSQKELNMRQR*WMELLEDFRVSIQYHPGKANVVADALSR 312
            HYLYGEKFE++SDHKSLKY+F+QK+LN RQR WME LED+  ++ YHPGKANVVADALSR
Sbjct: 817  HYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSR 876

Query: 311  KPRAMAAYLMTYWWRLIDTLVDYDIHQTAREPMVYLGVVSVQPTLMSRVIEAQIHDVWVQ 132
            K     + L    + +   + D+++          L  +S +P ++ R++EAQ+HD +++
Sbjct: 877  KSVGQLSSLELREFEMHTVIEDFELCLGLEGHGPCLYSISARPXVIQRIVEAQVHDEFLE 936

Query: 131  -ARLVDISSEGTSEWTVGIDKGLRLNGRLVVPESAELRKEIL 9
              +   ++ E    W++  D  +R  GRL VP+  ELR E+L
Sbjct: 937  KVKTQLVAGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELL 978


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
 Frame = -2

Query: 491  HYLYGEKFEIFSDHKSLKYLFSQKELNMRQR*WMELLEDFRVSIQYHPGKANVVADALSR 312
            HYLYGEKFE++SDHKSLKY+F+QK+LN RQR WME LED+  ++ YHPGKANVVADALSR
Sbjct: 955  HYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSR 1014

Query: 311  KPRAMAAYLMTYWWRLIDTLVDYD--IHQTAREPMVYLGVVSVQPTLMSRVIEAQIHDVW 138
            K     + L    + +   + D++  + Q  R P +Y   +S +P ++ R++EAQ+HD +
Sbjct: 1015 KSYGQLSNLGLREFEMHAVIEDFELCLSQEGRGPCLY--SISARPMVIQRIVEAQVHDEF 1072

Query: 137  VQARLVDISSEGTSEWTVGIDKGLRLNGRLVVPESAELRKEIL 9
            ++            +    +D  +R  GRL VP+  ELR E+L
Sbjct: 1073 LE------------KVKAPVDGSVRFKGRLCVPKDVELRNELL 1103


>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  140 bits (353), Expect = 1e-31
 Identities = 74/163 (45%), Positives = 104/163 (63%)
 Frame = -2

Query: 491 HYLYGEKFEIFSDHKSLKYLFSQKELNMRQR*WMELLEDFRVSIQYHPGKANVVADALSR 312
           HYLYG  F +FSDHKSLKYLF QKELNMRQR W+E L+DF  ++QYHPGKANVVADALSR
Sbjct: 171 HYLYGCTFTVFSDHKSLKYLFDQKELNMRQRRWIETLKDFDFTLQYHPGKANVVADALSR 230

Query: 311 KPRAMAAYLMTYWWRLIDTLVDYDIHQTAREPMVYLGVVSVQPTLMSRVIEAQIHDVWVQ 132
           +  ++++ +M     L +   D  ++      ++  G++ +   L+  +  +Q  DV +Q
Sbjct: 231 RSVSVSSLIMARQQELWEAFRDLHLNVEFAPGILKFGMIKISSGLLEDIANSQ-DDVLIQ 289

Query: 131 ARLVDISSEGTSEWTVGIDKGLRLNGRLVVPESAELRKEILDE 3
            +   I    T+E+ +G D  LR NGR+ VPE   +RK IL+E
Sbjct: 290 EKRNLIVQGKTTEFKIGADNVLRCNGRICVPEITAMRKTILEE 332


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