BLASTX nr result

ID: Coptis24_contig00009792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009792
         (2600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   328   4e-87
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   314   7e-83
ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   311   4e-82
emb|CBI29877.3| unnamed protein product [Vitis vinifera]              301   6e-79
ref|XP_002308967.1| predicted protein [Populus trichocarpa] gi|2...   301   6e-79

>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  328 bits (841), Expect = 4e-87
 Identities = 181/324 (55%), Positives = 217/324 (66%), Gaps = 4/324 (1%)
 Frame = -2

Query: 1312 MLRKRSRAMTSNQAFKTGNGSLSSPKDKEMKPTSAFFGSPRFFTGFSGKGSSET-ESAMS 1136
            M++KRSR  TS QA  + + S+ SP DK  KPTS     P+  TG + K  SET E+ MS
Sbjct: 1    MMKKRSRTATSKQALMSQHSSIPSPTDKFRKPTSF----PKLLTGLTFKNFSETAEAIMS 56

Query: 1135 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 956
            PTSILDSK F+   NPFW D                         + DSKG+GLGIVDAL
Sbjct: 57   PTSILDSKPFSGLKNPFWHDACPSPKTPEPDTRRHWD--------KLDSKGIGLGIVDAL 108

Query: 955  NDEETNQKLLKPDSRMVLFGSQLKIQIPSLPPSVISPTE-SPKSPSDFGIKTRNTQLGLI 779
            +DEET+  L KP+SRMVLFGSQLKIQIP LPP  +SPT+ SPK   DFGIKTRN+Q G  
Sbjct: 109  DDEETDSNLSKPESRMVLFGSQLKIQIPPLPPPFLSPTDQSPKLNGDFGIKTRNSQFG-- 166

Query: 778  SFSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKTT 599
            SFSSGLSP  VK SLF            P+VFT CLSAS+MELSEDYTCVI+HGP PKTT
Sbjct: 167  SFSSGLSPSPVKKSLFGSANSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTT 226

Query: 598  HIFGDCIVENCCGVIGLSPS--KMDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMY 425
            HIF +CIVE+CCG +G S S  K +  +  D   +  ++FLSFC +CKK L +GKDIY+Y
Sbjct: 227  HIFDNCIVESCCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIY 286

Query: 424  RGEKAFCSRECRYQEMLFDEGMEK 353
            RGE+AFCS ECRYQ ML +EG+++
Sbjct: 287  RGERAFCSNECRYQVMLLEEGIDE 310


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  314 bits (805), Expect = 7e-83
 Identities = 176/320 (55%), Positives = 212/320 (66%), Gaps = 1/320 (0%)
 Frame = -2

Query: 1312 MLRKRSRAMTSNQAFKTGNGSLSSPKDKEMKP-TSAFFGSPRFFTGFSGKGSSETESAMS 1136
            MLRKRSRA TS QA     GSL SP DK  +P +S+FF SPR FTGFS K  SETE+ MS
Sbjct: 1    MLRKRSRASTSKQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGFSSKVFSETETMMS 60

Query: 1135 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 956
            PTSILDSK F+ F NPF                            + DS+ +GLGIVDAL
Sbjct: 61   PTSILDSKPFSGFRNPF---------TNTTSTIKPSEPEPRRHWDKLDSRMIGLGIVDAL 111

Query: 955  NDEETNQKLLKPDSRMVLFGSQLKIQIPSLPPSVISPTESPKSPSDFGIKTRNTQLGLIS 776
              +E++ KL KP+SRMVLFGSQLKIQIP LP SV+SP ESPKSP+DFGIKTRN+QLG   
Sbjct: 112  THDESDPKLSKPESRMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLG--P 169

Query: 775  FSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKTTH 596
            FS  LS    K S F            P++FT CLSA++MELSEDYTCVISHGPNP+TTH
Sbjct: 170  FSPCLSQSPAKKSGFGSANSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTH 229

Query: 595  IFGDCIVENCCGVIGLSPSKMDISYSADCSRFSPENFLSFCYNCKKKLGEGKDIYMYRGE 416
            IF +CIV       G S S+ +       +   PE+FL+FC++C+K +G+GKDIY+YRGE
Sbjct: 230  IFDNCIV-------GFSASRKE-------NDVFPESFLNFCHSCRKNIGQGKDIYIYRGE 275

Query: 415  KAFCSRECRYQEMLFDEGME 356
            KAFCS ECR +E++ +E ME
Sbjct: 276  KAFCSSECRQREIMLEERME 295


>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  311 bits (798), Expect = 4e-82
 Identities = 183/329 (55%), Positives = 215/329 (65%), Gaps = 4/329 (1%)
 Frame = -2

Query: 1312 MLRKRSRAMTSNQAFKTGNGSLSSPKDKEMKPTSAFFGSPRFFTGFSGKGSSET-ESAMS 1136
            M+RKRSR  +S Q       S+ SP +K  KPTS     PR FTGFS K  SET ES MS
Sbjct: 1    MIRKRSRVSSSKQVLMADYSSILSPTEKYRKPTSF----PRLFTGFSFKNFSETTESVMS 56

Query: 1135 PTSILDSKSFTAFVNPFWFDXXXXXXXXXXXXXXXXXXXXXXKHHQFDSKGVGLGIVDAL 956
            PTSILDSK F+ F NPF  D                         + DSKG+GL IVDAL
Sbjct: 57   PTSILDSKPFSGFRNPFLPDQNLTPKTQESDTKRTWD--------KLDSKGIGLAIVDAL 108

Query: 955  N-DEETNQKLLKPDSRMVLFGSQLKIQIPSLPPSVISPTE-SPKSPSDFGIKTRNTQLGL 782
            N D++T+  L KP+SRMVLFGSQLKIQ+P LP   +SPT+ SPKSP+DFGIKTR++QLG 
Sbjct: 109  NYDDKTDSNLSKPESRMVLFGSQLKIQVPPLP---VSPTDQSPKSPADFGIKTRHSQLG- 164

Query: 781  ISFSSGLSPLSVKNSLFXXXXXXXXXXXXPQVFTRCLSASDMELSEDYTCVISHGPNPKT 602
             S SSGLS   VK S+             P VF   LSA +ME SEDYTCVIS+GPNPKT
Sbjct: 165  -SSSSGLSHSPVKKSVCGSANSSIDTSSSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKT 223

Query: 601  THIFGDCIVENCCGVIGLSPSKMDIS-YSADCSRFSPENFLSFCYNCKKKLGEGKDIYMY 425
            THIF D IVE+CC V+  S S+   + +  D S +  +NFLSFCY CKK LG+GKDIYMY
Sbjct: 224  THIFDDYIVESCCDVVEFSTSRTQTNGFLGDGSSYPSDNFLSFCYACKKNLGQGKDIYMY 283

Query: 424  RGEKAFCSRECRYQEMLFDEGMEKSNMED 338
            RGEKAFCS ECRYQEML +EG++K + ED
Sbjct: 284  RGEKAFCSSECRYQEMLSEEGIDKLDHED 312


>emb|CBI29877.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  301 bits (771), Expect = 6e-79
 Identities = 138/210 (65%), Positives = 162/210 (77%), Gaps = 7/210 (3%)
 Frame = +1

Query: 1990 KMMSTVQTWKCSWSLIAAIASLVTLVSTVHLFLFPLVPSSFSNLSARQIQNSSFP-NNEL 2166
            +M   +Q WKCSWSL+A +AS+V L+S  HLFLFPL PS     S  Q Q +  P N  +
Sbjct: 28   EMTFFLQKWKCSWSLLATVASVVALISVAHLFLFPLAPS-LEYFSMGQGQKTCTPINASI 86

Query: 2167 SG------EVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTNRTVNIVERIG 2328
             G       + P  +LDH+FPADSH +VVY GAPWKAEIGRW SGCDS    V+I+E+IG
Sbjct: 87   RGVDHDGKNLQPSFDLDHRFPADSHKSVVYRGAPWKAEIGRWFSGCDSIAAEVSIIEKIG 146

Query: 2329 GKTCKSNCSGQGVCNREVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPYGPWIVSICPA 2508
            GK CK++CSGQG+CN E+G CRCFHGFSGEGCSERL L+CN P SPEQPYGPW+VSICPA
Sbjct: 147  GKDCKNDCSGQGICNHELGQCRCFHGFSGEGCSERLHLDCNYPSSPEQPYGPWVVSICPA 206

Query: 2509 YCDTTRAMCFCGQGTKYPNRPVAEACGFQI 2598
             CDTTRAMCFCG+GTKYP+RPVAEACGFQ+
Sbjct: 207  SCDTTRAMCFCGEGTKYPHRPVAEACGFQM 236


>ref|XP_002308967.1| predicted protein [Populus trichocarpa] gi|222854943|gb|EEE92490.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score =  301 bits (771), Expect = 6e-79
 Identities = 138/209 (66%), Positives = 160/209 (76%), Gaps = 8/209 (3%)
 Frame = +1

Query: 1996 MSTVQTWKCSWSLIAAIASLVTLVSTVHLFLFPLVPSSFSNLSARQIQNSSFPNNEL--- 2166
            M T+  WKCSWSL+A IAS+V LVS VHLFLFP+VPS F   S  Q+Q+S  PNNE    
Sbjct: 1    MITISKWKCSWSLMATIASIVALVSVVHLFLFPVVPS-FDPFSVWQVQDSCGPNNESVDG 59

Query: 2167 -----SGEVGPPTNLDHKFPADSHNAVVYHGAPWKAEIGRWLSGCDSTNRTVNIVERIGG 2331
                  G + P  +L+HKFPAD H AV Y  APWKAEIGRWLSGCD+  + V++VE I G
Sbjct: 60   RTGHDPGNLQPVLDLEHKFPADLHRAVFYRNAPWKAEIGRWLSGCDAVTKEVSVVETISG 119

Query: 2332 KTCKSNCSGQGVCNREVGLCRCFHGFSGEGCSERLQLECNLPGSPEQPYGPWIVSICPAY 2511
            ++CK++CSGQGVCN E+G CRCFHGFSGEGCSERL LECN P SPE PYG W+VSIC A+
Sbjct: 120  RSCKNDCSGQGVCNYELGQCRCFHGFSGEGCSERLHLECNYPKSPELPYGRWVVSICSAH 179

Query: 2512 CDTTRAMCFCGQGTKYPNRPVAEACGFQI 2598
            CD TRAMCFCG+GTKYPNRP AE CGFQ+
Sbjct: 180  CDPTRAMCFCGEGTKYPNRPAAETCGFQL 208


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