BLASTX nr result

ID: Coptis24_contig00009788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009788
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61930.1| hypothetical protein VITISV_029934 [Vitis vinifera]    73   8e-11
ref|XP_002305059.1| predicted protein [Populus trichocarpa] gi|2...    63   9e-08

>emb|CAN61930.1| hypothetical protein VITISV_029934 [Vitis vinifera]
          Length = 212

 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 7/212 (3%)
 Frame = +2

Query: 2   FLLFLYLLMDGEKVTEDFDNLWFFSNIFXXXXXXXXXXXCTCSDGKITQFHLPELPISKL 181
           F L L+L+ D    TE  D+LWFFSN+             + +D K TQ  L   P S+ 
Sbjct: 15  FCLALFLMEDSG-FTEKLDSLWFFSNVLSLRSQSMS----SATDEKATQISLHHSPKSEA 69

Query: 182 QIPSAPIPQTKRVEALDIKDHVQTSSYLESSMQHVESVEM----ESVKTTEPTKNEQXXX 349
             P + I Q ++ +  + +  VQ    L      VE+ +     E ++   P K E+   
Sbjct: 70  TKPLSIIAQNQKNQTENAEVLVQQRRCLNCGEFAVETEDQIAKTEVLEVLPPVKEEKRRS 129

Query: 350 XXXXXXXXXXXXXXXDQRQQMQFNAFMEFR---DFGFSFVDIELDDELVPMAHMFQRSTV 520
                          +QR+++   + ++ +   D GF  V++   + +V  A  +Q    
Sbjct: 130 KRSFKSCL-------NQRRRVLGESDLQVKGLGDMGFD-VNVVCGNWVVEEASGYQWFGS 181

Query: 521 PYYYCKMPPLDDGLAMKEHLKSWACAVASTVR 616
           P++  KMPPL DG+AMK HLKSWA AVA TVR
Sbjct: 182 PHHV-KMPPLSDGMAMKHHLKSWAYAVACTVR 212


>ref|XP_002305059.1| predicted protein [Populus trichocarpa] gi|222848023|gb|EEE85570.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 52/197 (26%), Positives = 83/197 (42%)
 Frame = +2

Query: 26  MDGEKVTEDFDNLWFFSNIFXXXXXXXXXXXCTCSDGKITQFHLPELPISKLQIPSAPIP 205
           M+G ++ +  ++LWFF+N+               S   +T    P L  S      +P P
Sbjct: 1   MEGSQLIQSLESLWFFTNVVSSRASHARNRTIEDSPQPMT----PVLETSLQNHEDSPKP 56

Query: 206 QTKRVEALDIKDHVQTSSYLESSMQHVESVEMESVKTTEPTKNEQXXXXXXXXXXXXXXX 385
           +    + L   D +   + ++       +++ E V+  +PTK E+               
Sbjct: 57  EFFTPKCLKCGDFI---AEIQEHNGDQPNIKTEGVEIPKPTKKEEKRKRRERRRRRSKRK 113

Query: 386 XXXDQRQQMQFNAFMEFRDFGFSFVDIELDDELVPMAHMFQRSTVPYYYCKMPPLDDGLA 565
              +       ++     D+GF       +DE      MF   +   +  KMPPL+DG+A
Sbjct: 114 ILGELGLGFDKSSDYYKLDYGFGM----FNDEEARGYGMF--GSQRQHQVKMPPLNDGMA 167

Query: 566 MKEHLKSWACAVASTVR 616
           MKEHLKSWA  VASTVR
Sbjct: 168 MKEHLKSWAYVVASTVR 184


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