BLASTX nr result

ID: Coptis24_contig00009768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009768
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB77236.1| patellin 1 [Cucurbita pepo]                             78   4e-12
ref|XP_004170401.1| PREDICTED: patellin-3-like [Cucumis sativus]       77   8e-12
ref|XP_002271899.2| PREDICTED: patellin-5-like [Vitis vinifera]        77   8e-12
emb|CBI21668.3| unnamed protein product [Vitis vinifera]               77   8e-12
ref|XP_003522462.1| PREDICTED: patellin-5-like [Glycine max]           76   1e-11

>gb|ABB77236.1| patellin 1 [Cucurbita pepo]
          Length = 604

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
 Frame = -1

Query: 939 LGVLKWHV----KNSRELGCG*AGWSNLMSTRVMKVKHEKGSADWKLHSLVIKRALDPLE 772
           L  L+W V    K+ R+L     G S ++  +V  +K+  G   W+L +   KRAL   +
Sbjct: 364 LKFLRWRVQFLEKSIRKLDFSPNGISTIV--QVNDLKNSPGLTKWELRNAT-KRALQLFQ 420

Query: 771 --LQNQICVTAFINVPWWYLASNRMISPFLTIRTKSKLTLEGP--------------QYP 640
                      FINVPWWYLA NRMISPF T RTKSK    GP              Q P
Sbjct: 421 DNYPEFAAKQVFINVPWWYLAVNRMISPFFTQRTKSKFVFAGPSKTAETLFKYVTPEQVP 480

Query: 639 FQIHCF*A*L*YGGLNKEGDQELSKADAVSEL 544
            Q         YGGL++EG+QE S  D V+E+
Sbjct: 481 VQ---------YGGLSREGEQEFSIDDPVTEV 503


>ref|XP_004170401.1| PREDICTED: patellin-3-like [Cucumis sativus]
          Length = 606

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 56/152 (36%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
 Frame = -1

Query: 939 LGVLKWHV----KNSRELGCG*AGWSNLMSTRVMKVKHEKGSADWKLHSLVIKRALDPLE 772
           L  L+W +    K+  +L    +G S ++  +V  +K+  G   W+L +   +RAL  L+
Sbjct: 366 LKFLRWRIQFLEKSIIKLDFSPSGISTIV--QVNDLKNSPGLTKWELRNAT-RRALQLLQ 422

Query: 771 --LQNQICVTAFINVPWWYLASNRMISPFLTIRTKSKLTLEGP--------------QYP 640
                      FINVPWWYLA NRMISPF T RTKSK    GP              Q P
Sbjct: 423 DNYPEFAAKQVFINVPWWYLAVNRMISPFFTQRTKSKFVFAGPSKTAETLFKYVAPEQVP 482

Query: 639 FQIHCF*A*L*YGGLNKEGDQELSKADAVSEL 544
            Q         YGGL++EG+QE S  D V+E+
Sbjct: 483 VQ---------YGGLSREGEQEFSVEDPVTEV 505


>ref|XP_002271899.2| PREDICTED: patellin-5-like [Vitis vinifera]
          Length = 576

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 56/140 (40%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
 Frame = -1

Query: 930 LKWHV----KNSRELGCG*AGWSNLMSTRVMKVKHEKGSADWKLHSLVIKRALDPLE--L 769
           L+W +    K+ R+L     G S ++  +V  +K+  G   W+L     K+AL  L+   
Sbjct: 342 LRWRIQFLEKSIRKLDFTPGGISTIV--QVNDLKNSPGPGKWELRQAT-KQALQLLQDNY 398

Query: 768 QNQICVTAFINVPWWYLASNRMISPFLTIRTKSKLTLEGPQYPFQ-----IHCF*A*L*Y 604
              +    FINVPWWYLA NRMISPFLT RTKSK    GP    +     I      + Y
Sbjct: 399 PEFVAKQIFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLFKYIAAEQVPVKY 458

Query: 603 GGLNKEGDQELSKADAVSEL 544
           GGL+KEG  E   ADAV+E+
Sbjct: 459 GGLSKEG--EFGTADAVTEI 476


>emb|CBI21668.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 56/140 (40%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
 Frame = -1

Query: 930 LKWHV----KNSRELGCG*AGWSNLMSTRVMKVKHEKGSADWKLHSLVIKRALDPLE--L 769
           L+W +    K+ R+L     G S ++  +V  +K+  G   W+L     K+AL  L+   
Sbjct: 164 LRWRIQFLEKSIRKLDFTPGGISTIV--QVNDLKNSPGPGKWELRQAT-KQALQLLQDNY 220

Query: 768 QNQICVTAFINVPWWYLASNRMISPFLTIRTKSKLTLEGPQYPFQ-----IHCF*A*L*Y 604
              +    FINVPWWYLA NRMISPFLT RTKSK    GP    +     I      + Y
Sbjct: 221 PEFVAKQIFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLFKYIAAEQVPVKY 280

Query: 603 GGLNKEGDQELSKADAVSEL 544
           GGL+KEG  E   ADAV+E+
Sbjct: 281 GGLSKEG--EFGTADAVTEI 298


>ref|XP_003522462.1| PREDICTED: patellin-5-like [Glycine max]
          Length = 557

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
 Frame = -1

Query: 930 LKWHV----KNSRELGCG*AGWSNLMSTRVMKVKHEKGSADWKLHSLVIKRALDPLE--L 769
           L+W +    K+ R+L     G S ++  +V  +K+  G A W+L     K+AL  L+   
Sbjct: 323 LRWRIQFLEKSIRKLDFNPGGISTIV--QVNDLKNSPGPAKWELRQAT-KQALQLLQDNY 379

Query: 768 QNQICVTAFINVPWWYLASNRMISPFLTIRTKSKLTLEGPQYPFQ-----IHCF*A*L*Y 604
              +    FINVPWWYLA NRMISPFLT RTKSK    GP    +     I      + Y
Sbjct: 380 PEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLLRYIAAEQLPVKY 439

Query: 603 GGLNKEGDQELSKADAVSEL 544
           GGL+K+G  E   +DAV+E+
Sbjct: 440 GGLSKDG--EFGISDAVTEI 457


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