BLASTX nr result

ID: Coptis24_contig00009760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009760
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241479.1| uncharacterized protein LOC100794851 [Glycin...   221   3e-55
ref|XP_002301667.1| predicted protein [Populus trichocarpa] gi|2...   220   7e-55
ref|XP_003519322.1| PREDICTED: zinc finger protein 4-like isofor...   216   1e-53
ref|XP_002305892.1| predicted protein [Populus trichocarpa] gi|2...   213   7e-53
ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis...   206   8e-51

>ref|NP_001241479.1| uncharacterized protein LOC100794851 [Glycine max]
            gi|255635712|gb|ACU18205.1| unknown [Glycine max]
          Length = 257

 Score =  221 bits (563), Expect = 3e-55
 Identities = 119/236 (50%), Positives = 145/236 (61%)
 Frame = +3

Query: 522  PNSDFHTDSLSEGESDISSQVASNISIQETSSDLPKXXXXXXXXXXXXXXXXXXXXXXXX 701
            PN D   ++ +E ES++SSQVASN+SIQETS                             
Sbjct: 3    PNFDLEVEACAEYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAISL 62

Query: 702  XXXXKVGEGQFGCSKXXXXXXXXXXXXXXXXAVRTSAPSVPRIFSCNYCHRKFFSSQALG 881
                     + G                   A +T+A ++PR+FSCNYC RKFFSSQALG
Sbjct: 63   DLSLNFKNSEPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQALG 122

Query: 882  GHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSACRSLGIRAHSSLHNTFAPLETP 1061
            GHQNAHKRERTLAKRAMRMGFFS+RYA+LASLPLHGS  RSLGI+AHSSLH+ F P   P
Sbjct: 123  GHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGS-FRSLGIKAHSSLHHGFLPTMRP 181

Query: 1062 LEIRGGARFDYGHLEHPSFLEDNEAELFWPGSFRPIAGESDGHPGFGLMRSTNLNF 1229
             EI+  AR+D G+L HP FLED+E++L WPGSFR +A   D H  F L  S+N++F
Sbjct: 182  PEIKSNARYDQGYLGHPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTGSSNMSF 237


>ref|XP_002301667.1| predicted protein [Populus trichocarpa] gi|222843393|gb|EEE80940.1|
            predicted protein [Populus trichocarpa]
          Length = 235

 Score =  220 bits (560), Expect = 7e-55
 Identities = 119/239 (49%), Positives = 146/239 (61%)
 Frame = +3

Query: 522  PNSDFHTDSLSEGESDISSQVASNISIQETSSDLPKXXXXXXXXXXXXXXXXXXXXXXXX 701
            P  D   ++ SE  SD+SSQVASN+S QETS++                           
Sbjct: 3    PIIDLEVEASSENVSDVSSQVASNLSNQETSAETVSLDLKLCF----------------- 45

Query: 702  XXXXKVGEGQFGCSKXXXXXXXXXXXXXXXXAVRTSAPSVPRIFSCNYCHRKFFSSQALG 881
                   + + G                   A RT+A ++PR+FSCNYC RKFFSSQALG
Sbjct: 46   ------NDDELGGRDSMGLSLSSTSESSNDPASRTTAEAIPRVFSCNYCQRKFFSSQALG 99

Query: 882  GHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSACRSLGIRAHSSLHNTFAPLETP 1061
            GHQNAHKRERTLAKRA+RMG FS+RYASLASLPLHGS+ RSLGI+AHSS+H +FA    P
Sbjct: 100  GHQNAHKRERTLAKRAIRMGIFSERYASLASLPLHGSSFRSLGIKAHSSVHQSFAQPVRP 159

Query: 1062 LEIRGGARFDYGHLEHPSFLEDNEAELFWPGSFRPIAGESDGHPGFGLMRSTNLNFVTA 1238
             +I   ARFD+G++  P F+ED EAEL WPGSFR +A   D H  F L RS+N+NF+ A
Sbjct: 160  QDISSSARFDHGYVGLPIFMEDEEAELVWPGSFRQVAVADDAHQSFVLARSSNMNFLGA 218


>ref|XP_003519322.1| PREDICTED: zinc finger protein 4-like isoform 1 [Glycine max]
            gi|356501011|ref|XP_003519323.1| PREDICTED: zinc finger
            protein 4-like isoform 2 [Glycine max]
          Length = 257

 Score =  216 bits (549), Expect = 1e-53
 Identities = 118/236 (50%), Positives = 143/236 (60%)
 Frame = +3

Query: 522  PNSDFHTDSLSEGESDISSQVASNISIQETSSDLPKXXXXXXXXXXXXXXXXXXXXXXXX 701
            PN D   ++ +  ES++SSQVASN+SIQETS                             
Sbjct: 3    PNFDLEVEACAAYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAISL 62

Query: 702  XXXXKVGEGQFGCSKXXXXXXXXXXXXXXXXAVRTSAPSVPRIFSCNYCHRKFFSSQALG 881
                       G                   A +T+A ++PR+FSCNYC RKFFSSQALG
Sbjct: 63   DLSLNFKNSAPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQALG 122

Query: 882  GHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSACRSLGIRAHSSLHNTFAPLETP 1061
            GHQNAHKRERTLAKRAMRMGFFS+RYA+LASLPLHGS  RSLGI+AHSSLH+ F+P    
Sbjct: 123  GHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGS-FRSLGIKAHSSLHHGFSPTMRR 181

Query: 1062 LEIRGGARFDYGHLEHPSFLEDNEAELFWPGSFRPIAGESDGHPGFGLMRSTNLNF 1229
             EI+  ARFD G++ HP FLED+E++L WPGSFR +A   D H  F L  S+NL+F
Sbjct: 182  PEIKNNARFDQGYVGHPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTGSSNLSF 237


>ref|XP_002305892.1| predicted protein [Populus trichocarpa] gi|222848856|gb|EEE86403.1|
            predicted protein [Populus trichocarpa]
          Length = 258

 Score =  213 bits (543), Expect = 7e-53
 Identities = 117/239 (48%), Positives = 140/239 (58%)
 Frame = +3

Query: 522  PNSDFHTDSLSEGESDISSQVASNISIQETSSDLPKXXXXXXXXXXXXXXXXXXXXXXXX 701
            P  D   ++ SE  S++SSQVASN+S QETS+                            
Sbjct: 3    PIIDLEVEATSENVSEVSSQVASNLSNQETSAAPSNDSLTNYSYLTNAIATQSGSEMVSL 62

Query: 702  XXXXKVGEGQFGCSKXXXXXXXXXXXXXXXXAVRTSAPSVPRIFSCNYCHRKFFSSQALG 881
                     + G                   A RT+A ++PR+FSCNYC RKFFSSQALG
Sbjct: 63   DLTLCFNNDELGGRDPVGLSLSSTSESSNEPASRTTAEAIPRVFSCNYCQRKFFSSQALG 122

Query: 882  GHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSACRSLGIRAHSSLHNTFAPLETP 1061
            GHQNAHKRERTLAKRA+RMG FS+RYASLASLPLHGS+ RSLGI AHSS+H  FAP    
Sbjct: 123  GHQNAHKRERTLAKRAIRMGIFSERYASLASLPLHGSSFRSLGIEAHSSVHQNFAPPVRS 182

Query: 1062 LEIRGGARFDYGHLEHPSFLEDNEAELFWPGSFRPIAGESDGHPGFGLMRSTNLNFVTA 1238
            LEI   ARFD G+   P F+ED+EAEL WPGSFR +A   D H  F +  S+N+ F+ A
Sbjct: 183  LEISSSARFDQGYAGLPVFMEDDEAELLWPGSFRQVAVADDAHQSFVVAGSSNMIFLGA 241


>ref|XP_002285121.1| PREDICTED: zinc finger protein 4-like [Vitis vinifera]
          Length = 246

 Score =  206 bits (525), Expect = 8e-51
 Identities = 119/240 (49%), Positives = 136/240 (56%)
 Frame = +3

Query: 513  MKAPNSDFHTDSLSEGESDISSQVASNISIQETSSDLPKXXXXXXXXXXXXXXXXXXXXX 692
            M+ PN +      SE ES++SSQVASN+SIQETSSD  K                     
Sbjct: 1    MEPPNYNVE----SEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGS 56

Query: 693  XXXXXXXKVGEGQFGCSKXXXXXXXXXXXXXXXXAVRTSAPSVPRIFSCNYCHRKFFSSQ 872
                           C                    +    + P++FSCNYC RKFFSSQ
Sbjct: 57   VSLDLTL--------CFNPNDTKLKGMGESSSDAVAQAPVATAPKVFSCNYCRRKFFSSQ 108

Query: 873  ALGGHQNAHKRERTLAKRAMRMGFFSDRYASLASLPLHGSACRSLGIRAHSSLHNTFAPL 1052
            ALGGHQNAHKRERTLAKRAMRMG F+DRY SL+SLPLHGSA RSLGI AHSSLH    PL
Sbjct: 109  ALGGHQNAHKRERTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPL 168

Query: 1053 ETPLEIRGGARFDYGHLEHPSFLEDNEAELFWPGSFRPIAGESDGHPGFGLMRSTNLNFV 1232
            E P + RGGARF+ G+   P F+ED EAELFWPGSFR I     G     L +  N+NFV
Sbjct: 169  ERP-DTRGGARFEQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPNINFV 227


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