BLASTX nr result

ID: Coptis24_contig00009752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009752
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine...   200   6e-49
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...   196   1e-47
emb|CBI20016.3| unnamed protein product [Vitis vinifera]              196   1e-47
ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine...   190   5e-46
ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|2...   187   4e-45

>ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130 [Vitis vinifera] gi|296081492|emb|CBI20015.3|
            unnamed protein product [Vitis vinifera]
          Length = 1031

 Score =  200 bits (508), Expect = 6e-49
 Identities = 112/219 (51%), Positives = 142/219 (64%), Gaps = 4/219 (1%)
 Frame = +3

Query: 459  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTNI-ETNLGIKCNC 629
            ++A   TDPSEVR L SIFQQW I       + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 34   TEANATTDPSEVRVLNSIFQQWGISASNQWNTSGEPCTGAAIDSTSIDSSDYNPGIKCDC 93

Query: 630  TITNG-TCHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXXXXX 806
            +  N  TCHITQL+VYAL+V GVIP+EL +LTFLT L L QN+LT               
Sbjct: 94   SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTNLNLGQNYLTGPLSASIGNLT---- 149

Query: 807  XXXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSLPPE 986
                             ++Q LS+ INALSG +P +LG L +LR LAFG+NNFSGSLP E
Sbjct: 150  -----------------SMQYLSMGINALSGELPKELGQLTDLRSLAFGTNNFSGSLPSE 192

Query: 987  LGSLVNLEQIYMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            +G+LV LEQ+Y DS+GVSG IP+TF NL ++ T+WASDN
Sbjct: 193  IGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTTVWASDN 231


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1031

 Score =  196 bits (497), Expect = 1e-47
 Identities = 109/219 (49%), Positives = 141/219 (64%), Gaps = 4/219 (1%)
 Frame = +3

Query: 459  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTN-IETNLGIKCNC 629
            ++A   TDPSEVR L SIF+QW I   +   + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 34   TEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAIDSTSIDSADYNFGIKCDC 93

Query: 630  TITNG-TCHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXXXXX 806
            +  N  TCHITQL+VYAL+V GVIP+EL +LTFLT L L QN+LT               
Sbjct: 94   SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTSLNLGQNYLT--------------- 138

Query: 807  XXXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSLPPE 986
                             ++Q LS+ INALSG +P +LG L +LR  AFG+NNFSGSLP E
Sbjct: 139  ------GPLSASIGNLTSMQYLSLGINALSGELPKELGQLTDLRSFAFGTNNFSGSLPSE 192

Query: 987  LGSLVNLEQIYMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            +G+LV LEQ+Y DS+GVSG IP+TF NL ++  +WASDN
Sbjct: 193  IGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTIVWASDN 231


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score =  196 bits (497), Expect = 1e-47
 Identities = 109/219 (49%), Positives = 141/219 (64%), Gaps = 4/219 (1%)
 Frame = +3

Query: 459  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTN-IETNLGIKCNC 629
            ++A   TDPSEVR L SIF+QW I   +   + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 1183 TEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAIDSTSIDSADYNFGIKCDC 1242

Query: 630  TITNG-TCHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXXXXX 806
            +  N  TCHITQL+VYAL+V GVIP+EL +LTFLT L L QN+LT               
Sbjct: 1243 SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTSLNLGQNYLT--------------- 1287

Query: 807  XXXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSLPPE 986
                             ++Q LS+ INALSG +P +LG L +LR  AFG+NNFSGSLP E
Sbjct: 1288 ------GPLSASIGNLTSMQYLSLGINALSGELPKELGQLTDLRSFAFGTNNFSGSLPSE 1341

Query: 987  LGSLVNLEQIYMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            +G+LV LEQ+Y DS+GVSG IP+TF NL ++  +WASDN
Sbjct: 1342 IGNLVKLEQLYFDSSGVSGEIPSTFANLQSLTIVWASDN 1380



 Score =  182 bits (462), Expect = 1e-43
 Identities = 108/228 (47%), Positives = 136/228 (59%), Gaps = 13/228 (5%)
 Frame = +3

Query: 459  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTNIETNLGIKCNCT 632
            ++A   TDPSEV  L SIFQQW I       + G PCT  A+D+       N GIKC+C+
Sbjct: 100  TEANATTDPSEVTILNSIFQQWGISASNEWNTSGEPCTGAALDSADIK---NPGIKCDCS 156

Query: 633  ITNG-TCHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXXXXXX 809
              N  TCHITQL+VYAL+V G IP+EL +LTFLT L L QN+LT                
Sbjct: 157  YDNASTCHITQLKVYALDVVGAIPDELWNLTFLTNLNLGQNYLTGSLSASIGNLT----- 211

Query: 810  XXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSLPPEL 989
                            ++Q LS+ INALSG +P +LG L +LR +AFG+NNFSGSLP EL
Sbjct: 212  ----------------SMQYLSLGINALSGELPKELGQLTDLRSIAFGTNNFSGSLPSEL 255

Query: 990  GSLVNLEQI----------YMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            G+LV LEQ+          Y DS+G+SG IP+TF NL ++ T+WASDN
Sbjct: 256  GNLVKLEQLICCYCLTNQCYFDSSGLSGDIPSTFANLQSLTTVWASDN 303


>ref|XP_002267672.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At1g56130-like [Vitis vinifera]
          Length = 1028

 Score =  190 bits (483), Expect = 5e-46
 Identities = 108/218 (49%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
 Frame = +3

Query: 459  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTNIETNLGIKCNCT 632
            ++A   TDPSEV  L SIFQQW I       + G PCT  A+D+       N GIKC+C+
Sbjct: 34   TEANATTDPSEVTILNSIFQQWGISASNEWNTSGEPCTGAALDSADIK---NPGIKCDCS 90

Query: 633  ITNG-TCHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXXXXXX 809
              N  TCHITQL+VYAL+V G IP+EL +LTFLT L L QN+LT                
Sbjct: 91   YDNASTCHITQLKVYALDVVGAIPDELWNLTFLTNLNLGQNYLTGSLSASIGNLT----- 145

Query: 810  XXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSLPPEL 989
                            ++Q LS+ INALSG +P +LG L +LR +AFG+NNFSGSLP EL
Sbjct: 146  ----------------SMQYLSLGINALSGELPKELGQLTDLRSIAFGTNNFSGSLPSEL 189

Query: 990  GSLVNLEQIYMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            G+LV LEQ+Y DS+G+SG IP+TF NL ++ T+WASDN
Sbjct: 190  GNLVKLEQLYFDSSGLSGDIPSTFANLQSLTTVWASDN 227


>ref|XP_002310677.1| predicted protein [Populus trichocarpa] gi|222853580|gb|EEE91127.1|
            predicted protein [Populus trichocarpa]
          Length = 1036

 Score =  187 bits (475), Expect = 4e-45
 Identities = 107/222 (48%), Positives = 135/222 (60%), Gaps = 6/222 (2%)
 Frame = +3

Query: 456  RSQAQTPTDPSEVRALRSIFQQWQIPLDTL---SDGNPCTSVAVDTTTT--NIETNLGIK 620
            ++Q Q  TDP E RAL SIFQQW I  +T    + G+ C+  A   + T  N + N  IK
Sbjct: 28   QNQTQATTDPDEARALNSIFQQWSISANTNQWNTSGDVCSGAATGASPTIDNTDFNPFIK 87

Query: 621  CNCTITNGT-CHITQLRVYALNVRGVIPEELRSLTFLTFLKLDQNFLTXXXXXXXXXXXX 797
            C+CT  NGT C IT L+VYA++V G+IP+EL SL +LT L L QN+LT            
Sbjct: 88   CDCTFLNGTTCRITALKVYAIDVIGLIPDELWSLKYLTNLNLGQNYLTGNLSPSIGNLTR 147

Query: 798  XXXXXXXXXXXXXXXXXXXXALQTLSVRINALSGPIPPQLGGLRNLRILAFGSNNFSGSL 977
                                 +Q L++ INALSG +P +LG L +LR+  FGSNNF+GSL
Sbjct: 148  ---------------------MQYLTIGINALSGELPKELGQLTDLRVFGFGSNNFNGSL 186

Query: 978  PPELGSLVNLEQIYMDSAGVSGPIPTTFVNLVNMQTMWASDN 1103
            P  LG+LV LEQIY DS+GVSG IPTTF NL N+ T+WASDN
Sbjct: 187  PSALGNLVKLEQIYFDSSGVSGEIPTTFANLQNLATVWASDN 228


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