BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009750
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    42   1e-06
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    41   5e-06

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 42.4 bits (98), Expect(2) = 1e-06
 Identities = 16/46 (34%), Positives = 30/46 (65%)
 Frame = -2

Query: 329 GDETWTIIDSPPQQAHSDILFFNGRFYAIHAGGILRICEIDEPVPK 192
           GDE W I+++  +    D+++FNG FYA++  G + +C+++   PK
Sbjct: 199 GDECWNIVENS-RSFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPK 243



 Score = 34.7 bits (78), Expect(2) = 1e-06
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = -3

Query: 166 DRFYLVEISGHLHLVARALDKDYNAPEGVFRYVTDWFEVYRLDFSAKKWIELT 8
           D  YLV     L LV R LD D      +F Y T  FEV++LD +  +W  +T
Sbjct: 256 DMQYLVSSGDGLLLVTRYLDLDVEFD--IFIYKTARFEVFKLDLNGPRWERVT 306


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 40.8 bits (94), Expect(2) = 5e-06
 Identities = 16/48 (33%), Positives = 31/48 (64%)
 Frame = -2

Query: 335 RPGDETWTIIDSPPQQAHSDILFFNGRFYAIHAGGILRICEIDEPVPK 192
           R GD++W+++++  +    D++F NG FYA++  G + IC+I    P+
Sbjct: 196 RNGDKSWSLVENA-RSFCEDVIFVNGMFYAVNKAGQIVICDISSDSPR 242



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
 Frame = -3

Query: 166 DRFYLVEISGHLHLVARALDKDYN------APEGVFRYVTDWFEVYRLDFSAKKWIELT 8
           D  YLV     L LV R LD +Y        P  ++R +   FEV+RLD++  +W+ ++
Sbjct: 255 DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR--FEVFRLDWNGPQWLRMS 311