BLASTX nr result

ID: Coptis24_contig00009729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00009729
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide...   548   e-154
ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide...   547   e-153
ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide...   542   e-152
ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communi...   530   e-148
ref|XP_002321321.1| predicted protein [Populus trichocarpa] gi|2...   530   e-148

>ref|XP_004136045.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like [Cucumis sativus] gi|449533312|ref|XP_004173620.1|
            PREDICTED: WD repeat domain phosphoinositide-interacting
            protein 3-like [Cucumis sativus]
          Length = 420

 Score =  548 bits (1413), Expect = e-154
 Identities = 270/339 (79%), Positives = 291/339 (85%)
 Frame = +1

Query: 1    CFAAGTDQGFRIYNCDPFREIFRRVFDKGGGIGVVEMLFRCNILALVGGGTDPQYSPNKV 180
            CFAAGTD+GFRIYNCDPFREIFRR FD+GGG+GVVEMLFRCNILALVGGG DPQY PNKV
Sbjct: 83   CFAAGTDRGFRIYNCDPFREIFRRDFDRGGGVGVVEMLFRCNILALVGGGPDPQYPPNKV 142

Query: 181  MIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXXQKIFVYNFADLKLLHQIETFANPKG 360
            MIWDDHQ+RCIGELSF                   QK+FVYNFADLKLLHQIET ANPKG
Sbjct: 143  MIWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKVFVYNFADLKLLHQIETIANPKG 202

Query: 361  LCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHDSRVACFALSMDGKLLATAST 540
            LCAVSQ+STS VLVCPGLQKGQVRVEHYAS+RTKFI+AHDSR+ACFAL+ +G+LLATAST
Sbjct: 203  LCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMAHDSRIACFALTTNGQLLATAST 262

Query: 541  KGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWLAVSSDKGTVHVFSLKVNSGS 720
            KGTLVRI+NT DG LLQEVRRGADRAEIYSLAFS +AQWLAVSSDKGTVHVFSLKVNSGS
Sbjct: 263  KGTLVRIFNTFDGNLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSGS 322

Query: 721  PENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKN 900
              N+ S      +   P S SS SFIKGVLPKYF SEWSVAQFRLHEGSQY+VAFGHQKN
Sbjct: 323  LGNDMSHQNDSSLSVAP-SGSSFSFIKGVLPKYFKSEWSVAQFRLHEGSQYVVAFGHQKN 381

Query: 901  TVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 1017
            TVVILGMDGSFYRCQFD + GGEMTQLE++NFL P+E F
Sbjct: 382  TVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF 420


>ref|XP_002263976.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 3
            [Vitis vinifera]
          Length = 439

 Score =  547 bits (1409), Expect = e-153
 Identities = 271/339 (79%), Positives = 292/339 (86%)
 Frame = +1

Query: 1    CFAAGTDQGFRIYNCDPFREIFRRVFDKGGGIGVVEMLFRCNILALVGGGTDPQYSPNKV 180
            CFAAGTD GFRIYNCDPFREIFRR FD+GGGIGVVEMLFRCNILALVGGG +PQY  NKV
Sbjct: 101  CFAAGTDNGFRIYNCDPFREIFRRDFDRGGGIGVVEMLFRCNILALVGGGPEPQYPLNKV 160

Query: 181  MIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXXQKIFVYNFADLKLLHQIETFANPKG 360
            MIWDDHQ+RCIGELSF                   QKIF+YNFADLKLLHQIET ANP+G
Sbjct: 161  MIWDDHQSRCIGELSFRSEVRAVKLRRDRIIVVLEQKIFLYNFADLKLLHQIETIANPRG 220

Query: 361  LCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHDSRVACFALSMDGKLLATAST 540
            LCAVSQ++ S VLVCPGLQKGQVRVEHYAS+RTKF  AHDSR+ACFAL+ DG+LLATAST
Sbjct: 221  LCAVSQLTASLVLVCPGLQKGQVRVEHYASRRTKFFAAHDSRLACFALTTDGQLLATAST 280

Query: 541  KGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWLAVSSDKGTVHVFSLKVNSGS 720
            KGTLVRI+NT DGT LQEVRRGADRAE+YS+AFS +AQWLAVSSDKGTVHVF LKVNSGS
Sbjct: 281  KGTLVRIFNTSDGTRLQEVRRGADRAEVYSMAFSSTAQWLAVSSDKGTVHVFGLKVNSGS 340

Query: 721  PENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKN 900
              N+KS  AS+   A  SS  SLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKN
Sbjct: 341  LGNDKSHGASDANLAVASSGLSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQKN 400

Query: 901  TVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 1017
            TVVILGMDGSFYRCQFDP+TGGEMTQLE++NFL P+E F
Sbjct: 401  TVVILGMDGSFYRCQFDPVTGGEMTQLEYHNFLKPEEAF 439


>ref|XP_002283982.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein
            3-like isoform 1 [Vitis vinifera]
          Length = 425

 Score =  542 bits (1396), Expect = e-152
 Identities = 273/344 (79%), Positives = 295/344 (85%), Gaps = 5/344 (1%)
 Frame = +1

Query: 1    CFAAGTDQGFRIYNCDPFREIFRRVF--DKGG---GIGVVEMLFRCNILALVGGGTDPQY 165
            CF+AGTD GFRIYNCDPFREIFRR F  D GG   GIGVVEMLFRCNILALVGGG DPQY
Sbjct: 82   CFSAGTDHGFRIYNCDPFREIFRRDFCGDDGGSGTGIGVVEMLFRCNILALVGGGPDPQY 141

Query: 166  SPNKVMIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXXQKIFVYNFADLKLLHQIETF 345
             PNKVMIWDDHQ RCIGELSF                   QKIFVYNFADLKLLHQIET 
Sbjct: 142  PPNKVMIWDDHQTRCIGELSFRSEVKSVRLRRDRIVAILLQKIFVYNFADLKLLHQIETI 201

Query: 346  ANPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHDSRVACFALSMDGKLL 525
            ANPKGLC VSQ+S S VLVCPGL KGQVRVEHY SKRTKFI+AHDSR+ACFAL+ DG+LL
Sbjct: 202  ANPKGLCEVSQLSGSMVLVCPGLLKGQVRVEHYNSKRTKFIMAHDSRIACFALTQDGRLL 261

Query: 526  ATASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWLAVSSDKGTVHVFSLK 705
            AT+S+KGTLVRI+NT+DGTLLQEVRRGADRAEIYS+AFS SAQWLAVSSDKGTVHVFSLK
Sbjct: 262  ATSSSKGTLVRIFNTLDGTLLQEVRRGADRAEIYSVAFSSSAQWLAVSSDKGTVHVFSLK 321

Query: 706  VNSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAF 885
            V SGS  +++SR +SE   + PS+ SSLSF+KGVLP+YFSSEWSVAQFRLHEGSQYIVAF
Sbjct: 322  VESGSLGSDRSRSSSEPNLSVPSAVSSLSFMKGVLPRYFSSEWSVAQFRLHEGSQYIVAF 381

Query: 886  GHQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 1017
            GHQKNTVVILGMDGSFYRCQFDP+ GGEMTQLE+YNFL P+ETF
Sbjct: 382  GHQKNTVVILGMDGSFYRCQFDPVAGGEMTQLEYYNFLKPEETF 425


>ref|XP_002531866.1| WD-repeat protein, putative [Ricinus communis]
            gi|223528474|gb|EEF30503.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 447

 Score =  530 bits (1366), Expect = e-148
 Identities = 264/341 (77%), Positives = 287/341 (84%), Gaps = 2/341 (0%)
 Frame = +1

Query: 1    CFAAGTDQGFRIYNCDPFREIFRRVFDKGGG--IGVVEMLFRCNILALVGGGTDPQYSPN 174
            CFAAGTD GFRIYNCDPFREIFRR FD+GGG  IGVVEMLFRCNILALVGGG+DPQY PN
Sbjct: 107  CFAAGTDHGFRIYNCDPFREIFRRDFDRGGGGGIGVVEMLFRCNILALVGGGSDPQYPPN 166

Query: 175  KVMIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXXQKIFVYNFADLKLLHQIETFANP 354
            KVMIWDDHQ+RCIGELSF                   QKIFVYNFADLKLLHQIET ANP
Sbjct: 167  KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANP 226

Query: 355  KGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHDSRVACFALSMDGKLLATA 534
            KGLCAVS  + S VLVCPGLQKGQVRVEHYASKRTKFI+AHDSR+ACFAL+ DG+LLATA
Sbjct: 227  KGLCAVSHGAGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATA 286

Query: 535  STKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWLAVSSDKGTVHVFSLKVNS 714
            STKGTLVR++NT DG+LLQEVRRGADRAEIYS+AFS +AQWLAVSSDKGTVHVFSLK   
Sbjct: 287  STKGTLVRVFNTADGSLLQEVRRGADRAEIYSVAFSSTAQWLAVSSDKGTVHVFSLKTTP 346

Query: 715  GSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFGHQ 894
            GS   ++SR+ ++      S  SSLSF KGVLPKYFSSEWSVAQFRL EGS YIVAFGHQ
Sbjct: 347  GSLGTDRSRNTTDPNVGVSSPTSSLSFFKGVLPKYFSSEWSVAQFRLVEGSHYIVAFGHQ 406

Query: 895  KNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPKETF 1017
            KNTVVILG+DGSFYRCQFDP+ GGEM+QLEF+NFL P+  F
Sbjct: 407  KNTVVILGLDGSFYRCQFDPVNGGEMSQLEFHNFLKPEAAF 447


>ref|XP_002321321.1| predicted protein [Populus trichocarpa] gi|222862094|gb|EEE99636.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  530 bits (1364), Expect = e-148
 Identities = 265/340 (77%), Positives = 284/340 (83%), Gaps = 4/340 (1%)
 Frame = +1

Query: 1    CFAAGTDQGFRIYNCDPFREIFRRVFD----KGGGIGVVEMLFRCNILALVGGGTDPQYS 168
            CFAAGTD GFRIYNCDPFREIFRR FD     GGGIG VEMLFRCN+LALVGGG DPQY 
Sbjct: 12   CFAAGTDHGFRIYNCDPFREIFRRDFDGSGNSGGGIGAVEMLFRCNVLALVGGGPDPQYP 71

Query: 169  PNKVMIWDDHQNRCIGELSFXXXXXXXXXXXXXXXXXXXQKIFVYNFADLKLLHQIETFA 348
            PNKVMIWDDHQ+RCIGELSF                   QKIFVYNFADLKLLHQIET A
Sbjct: 72   PNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIA 131

Query: 349  NPKGLCAVSQVSTSFVLVCPGLQKGQVRVEHYASKRTKFILAHDSRVACFALSMDGKLLA 528
            NPKGLCAVS  + S VLVCPGLQKGQVRVEHYASKRTKFI+ HDSR ACFAL+ DG+LLA
Sbjct: 132  NPKGLCAVSHGAGSLVLVCPGLQKGQVRVEHYASKRTKFIMVHDSRTACFALTQDGQLLA 191

Query: 529  TASTKGTLVRIYNTVDGTLLQEVRRGADRAEIYSLAFSPSAQWLAVSSDKGTVHVFSLKV 708
            TASTKGTLVRI+NT DGTLLQEVRRGADRAE+YSLAFS +AQWLAVSSDKGTVHVFSLK+
Sbjct: 192  TASTKGTLVRIFNTADGTLLQEVRRGADRAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKI 251

Query: 709  NSGSPENEKSRHASEMIPATPSSNSSLSFIKGVLPKYFSSEWSVAQFRLHEGSQYIVAFG 888
            N GSP  ++S+  +E   A  S  SSLSF KGVLPKYFSSEWSVAQF L EGSQYIVAFG
Sbjct: 252  NPGSPVIDRSQSTNEPNLALTSPASSLSFFKGVLPKYFSSEWSVAQFHLVEGSQYIVAFG 311

Query: 889  HQKNTVVILGMDGSFYRCQFDPMTGGEMTQLEFYNFLYPK 1008
            HQKNTVVILG+DGSFYRCQFDP+ GGEMTQLE++NFL P+
Sbjct: 312  HQKNTVVILGLDGSFYRCQFDPVNGGEMTQLEYHNFLKPE 351


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